RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 DGKZQ13574 1117 aa11.81□□□□□ -0.52
PTCH1-208ENST00000430669 FAM153CQ494X1 144 aa11.81□□□□□ -0.52
PTCH1-208ENST00000430669 ZC3H3Q8IXZ2 948 aaKnown RBP11.81□□□□□ -0.52
PTCH1-208ENST00000430669 EDEM1Q92611 657 aa11.81□□□□□ -0.52
PTCH1-208ENST00000430669 SH3GL1Q99961 368 aa11.81□□□□□ -0.52
PTCH1-208ENST00000430669 ZYG11BQ9C0D3 744 aa11.81□□□□□ -0.52
PTCH1-208ENST00000430669 RCCD1A6NED2 376 aa11.8□□□□□ -0.52
PTCH1-208ENST00000430669 PECAM1P16284 738 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-208ENST00000430669 PAN2Q504Q3 1202 aaKnown RBP11.8□□□□□ -0.52
PTCH1-208ENST00000430669 THEMIS2Q5TEJ8 643 aa11.8□□□□□ -0.52
PTCH1-208ENST00000430669 C12orf50Q8NA57 414 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-208ENST00000430669 TDRD5Q8NAT2 981 aaKnown RBP11.8□□□□□ -0.52
PTCH1-208ENST00000430669 ZNF398Q8TD17 642 aa11.8□□□□□ -0.52
PTCH1-208ENST00000430669 PDGFDQ9GZP0 370 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-208ENST00000430669 REXO2Q9Y3B8 237 aaKnown RBP11.8□□□□□ -0.52
PTCH1-208ENST00000430669 KANSL1LA0AUZ9 987 aa11.8□□□□□ -0.52
PTCH1-208ENST00000430669 H0Y3Z8 333 aa11.8□□□□□ -0.52
PTCH1-208ENST00000430669 PRPF4O43172 522 aaKnown RBP eCLIP11.8□□□□□ -0.52
PTCH1-208ENST00000430669 SYF2O95926 243 aaKnown RBP11.8□□□□□ -0.52
PTCH1-208ENST00000430669 ITGALP20701 1170 aa11.8□□□□□ -0.52
PTCH1-208ENST00000430669 POLD2P49005 469 aa11.8□□□□□ -0.52
PTCH1-208ENST00000430669 ICE2Q659A1 982 aa11.8□□□□□ -0.52
PTCH1-208ENST00000430669 MYO1HQ8N1T3 1032 aa11.8□□□□□ -0.52
PTCH1-208ENST00000430669 THTPAQ9BU02 230 aa11.8□□□□□ -0.52
PTCH1-208ENST00000430669 NMRAL1Q9HBL8 299 aa11.8□□□□□ -0.52
PTCH1-208ENST00000430669 BTBD7Q9P203 1132 aa11.8□□□□□ -0.52
PTCH1-208ENST00000430669 MARCOQ9UEW3 520 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-208ENST00000430669 SLC4A7Q9Y6M7 1214 aa11.8□□□□□ -0.52
PTCH1-208ENST00000430669 OR6C75A6NL08 312 aa11.8□□□□□ -0.52
PTCH1-208ENST00000430669 MGEA5O60502 916 aa11.8□□□□□ -0.52
PTCH1-208ENST00000430669 AVPR1AP37288 418 aa11.8□□□□□ -0.52
PTCH1-208ENST00000430669 ACTN3Q08043 901 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-208ENST00000430669 FAXCQ5TGI0 409 aa11.8□□□□□ -0.52
PTCH1-208ENST00000430669 ARID3BQ8IVW6 561 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-208ENST00000430669 PRELID2Q8N945 189 aa11.8□□□□□ -0.52
PTCH1-208ENST00000430669 AGR3Q8TD06 166 aa11.8□□□□□ -0.52
PTCH1-208ENST00000430669 HDAC7Q8WUI4 952 aa11.8□□□□□ -0.52
PTCH1-208ENST00000430669 FSCN2O14926 492 aa11.8□□□□□ -0.52
PTCH1-208ENST00000430669 MDM4O15151 490 aa11.8□□□□□ -0.52
PTCH1-208ENST00000430669 FKTNO75072 461 aa11.8□□□□□ -0.52
PTCH1-208ENST00000430669 DDHD2O94830 711 aa11.8□□□□□ -0.52
PTCH1-208ENST00000430669 SERPINE1P05121 402 aa11.8□□□□□ -0.52
PTCH1-208ENST00000430669 PRMT2P55345 433 aa11.8□□□□□ -0.52
PTCH1-208ENST00000430669 SNX27Q96L92 541 aa11.8□□□□□ -0.52
PTCH1-208ENST00000430669 SAR1AQ9NR31 198 aa11.8□□□□□ -0.52
PTCH1-208ENST00000430669 AFF4Q9UHB7 1163 aaKnown RBP11.8□□□□□ -0.52
PTCH1-208ENST00000430669 QSER1Q2KHR3 1735 aa11.8□□□□□ -0.52
PTCH1-208ENST00000430669 TSPAN1O60635 241 aa11.8□□□□□ -0.52
PTCH1-208ENST00000430669 SLC1A6P48664 564 aa11.8□□□□□ -0.52
PTCH1-208ENST00000430669 PRKAA1Q13131 559 aa11.8□□□□□ -0.52
PTCH1-208ENST00000430669 RETSATQ6NUM9 610 aa11.8□□□□□ -0.52
PTCH1-208ENST00000430669 LRRC43Q8N309 656 aa11.8□□□□□ -0.52
PTCH1-208ENST00000430669 SEMA4DQ92854 862 aa11.8□□□□□ -0.52
PTCH1-208ENST00000430669 PRPF18Q99633 342 aaKnown RBP11.8□□□□□ -0.52
PTCH1-208ENST00000430669 EFCAB1Q9HAE3 211 aa11.8□□□□□ -0.52
PTCH1-208ENST00000430669 DDX20Q9UHI6 824 aaKnown RBP11.8□□□□□ -0.52
PTCH1-208ENST00000430669 WDR27A2RRH5 827 aa11.8□□□□□ -0.52
PTCH1-208ENST00000430669 IL1RL1Q01638 556 aa11.8□□□□□ -0.52
PTCH1-208ENST00000430669 PTCD2Q8WV60 388 aaKnown RBP11.8□□□□□ -0.52
PTCH1-208ENST00000430669 RBBP8Q99708 897 aa11.8□□□□□ -0.52
PTCH1-208ENST00000430669 TRIP12Q14669 1992 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-208ENST00000430669 H3BMM5 538 aa11.8□□□□□ -0.52
PTCH1-208ENST00000430669 SLC9A3R1O14745 358 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-208ENST00000430669 NOVP48745 357 aa11.8□□□□□ -0.52
PTCH1-208ENST00000430669 SLAIN1Q8ND83 568 aa11.8□□□□□ -0.52
PTCH1-208ENST00000430669 SOX13Q9UN79 622 aa11.8□□□□□ -0.52
PTCH1-208ENST00000430669 PDE2AO00408 941 aaPredicted RBP11.79□□□□□ -0.52
PTCH1-208ENST00000430669 SERPINH1P50454 418 aaKnown RBP11.79□□□□□ -0.52
PTCH1-208ENST00000430669 HIST2H2ACQ16777 129 aaPredicted RBP11.79□□□□□ -0.52
PTCH1-208ENST00000430669 HIST2H2AA3Q6FI13 130 aa11.79□□□□□ -0.52
PTCH1-208ENST00000430669 YTHDF3Q7Z739 585 aaKnown RBP11.79□□□□□ -0.52
PTCH1-208ENST00000430669 LRRC57Q8N9N7 239 aa11.79□□□□□ -0.52
PTCH1-208ENST00000430669 TMA16Q96EY4 203 aaKnown RBP11.79□□□□□ -0.52
PTCH1-208ENST00000430669 MAGEB10Q96LZ2 347 aaPredicted RBP11.79□□□□□ -0.52
PTCH1-208ENST00000430669 SPATS2LQ9NUQ6 558 aaKnown RBP11.79□□□□□ -0.52
PTCH1-208ENST00000430669 EIF3LQ9Y262 564 aaKnown RBP11.79□□□□□ -0.52
PTCH1-208ENST00000430669 CPA3P15088 417 aa11.79□□□□□ -0.52
PTCH1-208ENST00000430669 RAG1P15918 1043 aa11.79□□□□□ -0.52
PTCH1-208ENST00000430669 SEC24CP53992 1094 aa11.79□□□□□ -0.52
PTCH1-208ENST00000430669 CYLC2Q14093 348 aaPredicted RBP11.79□□□□□ -0.52
PTCH1-208ENST00000430669 PPP1R26Q5T8A7 1209 aaPredicted RBP11.79□□□□□ -0.52
PTCH1-208ENST00000430669 DDI1Q8WTU0 396 aa11.79□□□□□ -0.52
PTCH1-208ENST00000430669 WWOXQ9NZC7 414 aa11.79□□□□□ -0.52
PTCH1-208ENST00000430669 RNF103-CHMP3A0A140T963 221 aa11.79□□□□□ -0.52
PTCH1-208ENST00000430669 NFKBIEO00221 500 aa11.79□□□□□ -0.52
PTCH1-208ENST00000430669 ACAT1P24752 427 aaKnown RBP11.79□□□□□ -0.52
PTCH1-208ENST00000430669 ARCQ7LC44 396 aa11.79□□□□□ -0.52
PTCH1-208ENST00000430669 TRIML2Q8N7C3 387 aa11.79□□□□□ -0.52
PTCH1-208ENST00000430669 ZNF555Q8NEP9 628 aa11.79□□□□□ -0.52
PTCH1-208ENST00000430669 TMEM191CA6NGB0 347 aa11.79□□□□□ -0.52
PTCH1-208ENST00000430669 SASH3O75995 380 aa11.79□□□□□ -0.52
PTCH1-208ENST00000430669 EOMESO95936 686 aa11.79□□□□□ -0.52
PTCH1-208ENST00000430669 AMPD1P23109 780 aa11.79□□□□□ -0.52
PTCH1-208ENST00000430669 USP41Q3LFD5 358 aa11.79□□□□□ -0.52
PTCH1-208ENST00000430669 CDCA2Q69YH5 1023 aaPredicted RBP11.79□□□□□ -0.52
PTCH1-208ENST00000430669 LRRN4CLQ8ND94 238 aa11.79□□□□□ -0.52
PTCH1-208ENST00000430669 TAS2R13Q9NYV9 303 aa11.79□□□□□ -0.52
PTCH1-208ENST00000430669 H3BQF6 201 aa11.79□□□□□ -0.52
PTCH1-208ENST00000430669 RHOAP61586 193 aa11.79□□□□□ -0.52
PTCH1-208ENST00000430669 MAP3K10Q02779 954 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms