RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 SLC26A7Q8TE54 656 aa13.74□□□□□ -0.21
COL6A2-204ENST00000409416 SYT15Q9BQS2 421 aa13.74□□□□□ -0.21
COL6A2-204ENST00000409416 TUBB6Q9BUF5 446 aa13.74□□□□□ -0.21
COL6A2-204ENST00000409416 LHX5Q9H2C1 402 aa13.74□□□□□ -0.21
COL6A2-204ENST00000409416 PSAT1Q9Y617 370 aa13.74□□□□□ -0.21
COL6A2-204ENST00000409416 A0A0G2JLL6 359 aaPredicted RBP13.73□□□□□ -0.21
COL6A2-204ENST00000409416 AIM2O14862 343 aa13.73□□□□□ -0.21
COL6A2-204ENST00000409416 SNAI1O95863 264 aaPredicted RBP13.73□□□□□ -0.21
COL6A2-204ENST00000409416 PTPN7P35236 360 aa13.73□□□□□ -0.21
COL6A2-204ENST00000409416 OR1G1P47890 313 aa13.73□□□□□ -0.21
COL6A2-204ENST00000409416 CLCNKBP51801 687 aa13.73□□□□□ -0.21
COL6A2-204ENST00000409416 NEK3P51956 506 aa13.73□□□□□ -0.21
COL6A2-204ENST00000409416 HDAC4P56524 1084 aa13.73□□□□□ -0.21
COL6A2-204ENST00000409416 KCNJ11Q14654 390 aa13.73□□□□□ -0.21
COL6A2-204ENST00000409416 PDCD2Q16342 344 aaPredicted RBP13.73□□□□□ -0.21
COL6A2-204ENST00000409416 N4BP2L1Q5TBK1 243 aaPredicted RBP13.73□□□□□ -0.21
COL6A2-204ENST00000409416 PRRT2Q7Z6L0 340 aaPredicted RBP13.73□□□□□ -0.21
COL6A2-204ENST00000409416 SCUBE1Q8IWY4 988 aa13.73□□□□□ -0.21
COL6A2-204ENST00000409416 MTBPQ96DY7 904 aa13.73□□□□□ -0.21
COL6A2-204ENST00000409416 AGAP2Q99490 1192 aa13.73□□□□□ -0.21
COL6A2-204ENST00000409416 PLEKHA5Q9HAU0 1116 aa13.73□□□□□ -0.21
COL6A2-204ENST00000409416 FAM72CH0Y354 149 aa13.73□□□□□ -0.21
COL6A2-204ENST00000409416 LINGO3P0C6S8 592 aa13.73□□□□□ -0.21
COL6A2-204ENST00000409416 MCF2P10911 925 aa13.73□□□□□ -0.21
COL6A2-204ENST00000409416 SERPINB5P36952 375 aa13.73□□□□□ -0.21
COL6A2-204ENST00000409416 MFSD10Q14728 455 aa13.73□□□□□ -0.21
COL6A2-204ENST00000409416 FASTKD1Q53R41 847 aaKnown RBP13.73□□□□□ -0.21
COL6A2-204ENST00000409416 FAM72AQ5TYM5 149 aa13.73□□□□□ -0.21
COL6A2-204ENST00000409416 OLFML2BQ68BL8 750 aa13.73□□□□□ -0.21
COL6A2-204ENST00000409416 FAM72DQ6L9T8 149 aa13.73□□□□□ -0.21
COL6A2-204ENST00000409416 RIPOR1Q6ZS17 1223 aa13.73□□□□□ -0.21
COL6A2-204ENST00000409416 OTOP3Q7RTS5 596 aa13.73□□□□□ -0.21
COL6A2-204ENST00000409416 FAM72BQ86X60 149 aa13.73□□□□□ -0.21
COL6A2-204ENST00000409416 ZNF483Q8TF39 744 aaPredicted RBP13.73□□□□□ -0.21
COL6A2-204ENST00000409416 TFB1MQ8WVM0 346 aaKnown RBP13.73□□□□□ -0.21
COL6A2-204ENST00000409416 TEKT4Q8WW24 435 aa13.73□□□□□ -0.21
COL6A2-204ENST00000409416 NRG4Q8WWG1 115 aa13.73□□□□□ -0.21
COL6A2-204ENST00000409416 PYDC1Q8WXC3 89 aa13.73□□□□□ -0.21
COL6A2-204ENST00000409416 MFSD3Q96ES6 412 aa13.73□□□□□ -0.21
COL6A2-204ENST00000409416 PTCD3Q96EY7 689 aaKnown RBP13.73□□□□□ -0.21
COL6A2-204ENST00000409416 KCTD15Q96SI1 283 aaPredicted RBP13.73□□□□□ -0.21
COL6A2-204ENST00000409416 PLA2G4CQ9UP65 541 aa13.73□□□□□ -0.21
COL6A2-204ENST00000409416 PLLPQ9Y342 182 aa13.73□□□□□ -0.21
COL6A2-204ENST00000409416 DCAF8L1A6NGE4 600 aa13.73□□□□□ -0.21
COL6A2-204ENST00000409416 C2CD4BA6NLJ0 364 aa13.73□□□□□ -0.21
COL6A2-204ENST00000409416 YJEFN3A6XGL0 299 aa13.73□□□□□ -0.21
COL6A2-204ENST00000409416 C9JVG2 144 aa13.73□□□□□ -0.21
COL6A2-204ENST00000409416 E7ENQ6 273 aa13.73□□□□□ -0.21
COL6A2-204ENST00000409416 E7ESA3 106 aa13.73□□□□□ -0.21
COL6A2-204ENST00000409416 B4GALT4O60513 344 aa13.73□□□□□ -0.21
COL6A2-204ENST00000409416 MMP3P08254 477 aa13.73□□□□□ -0.21
COL6A2-204ENST00000409416 CD52P31358 61 aa13.73□□□□□ -0.21
COL6A2-204ENST00000409416 ENPEPQ07075 957 aa13.73□□□□□ -0.21
COL6A2-204ENST00000409416 ZNF484Q5JVG2 852 aa13.73□□□□□ -0.21
COL6A2-204ENST00000409416 TCHHL1Q5QJ38 904 aaPredicted RBP13.73□□□□□ -0.21
COL6A2-204ENST00000409416 IZUMO2Q6UXV1 221 aa13.73□□□□□ -0.21
COL6A2-204ENST00000409416 CAND1Q86VP6 1230 aaKnown RBP13.73□□□□□ -0.21
COL6A2-204ENST00000409416 SKA1Q96BD8 255 aa13.73□□□□□ -0.21
COL6A2-204ENST00000409416 C12orf42Q96LP6 360 aa13.73□□□□□ -0.21
COL6A2-204ENST00000409416 POPDC2Q9HBU9 364 aa13.73□□□□□ -0.21
COL6A2-204ENST00000409416 SARS2Q9NP81 518 aaKnown RBP13.73□□□□□ -0.21
COL6A2-204ENST00000409416 CHST12Q9NRB3 414 aa13.73□□□□□ -0.21
COL6A2-204ENST00000409416 CORO1CQ9ULV4 474 aaPredicted RBP13.73□□□□□ -0.21
COL6A2-204ENST00000409416 CXCL11O14625 94 aa13.72□□□□□ -0.21
COL6A2-204ENST00000409416 CHADO15335 359 aa13.72□□□□□ -0.21
COL6A2-204ENST00000409416 MT-CYBP00156 380 aaPredicted RBP13.72□□□□□ -0.21
COL6A2-204ENST00000409416 ICAM3P32942 547 aa13.72□□□□□ -0.21
COL6A2-204ENST00000409416 CDH5P33151 784 aaPredicted RBP13.72□□□□□ -0.21
COL6A2-204ENST00000409416 ETV4P43268 484 aa13.72□□□□□ -0.21
COL6A2-204ENST00000409416 CTBP1Q13363 440 aa13.72□□□□□ -0.21
COL6A2-204ENST00000409416 ZNF280DQ6N043 979 aa13.72□□□□□ -0.21
COL6A2-204ENST00000409416 ZNF276Q8N554 614 aa13.72□□□□□ -0.21
COL6A2-204ENST00000409416 SHKBP1Q8TBC3 707 aa13.72□□□□□ -0.21
COL6A2-204ENST00000409416 CDKL2Q92772 493 aa13.72□□□□□ -0.21
COL6A2-204ENST00000409416 SENP8Q96LD8 212 aa13.72□□□□□ -0.21
COL6A2-204ENST00000409416 IL1RL2Q9HB29 575 aa13.72□□□□□ -0.21
COL6A2-204ENST00000409416 SYBUQ9NX95 663 aa13.72□□□□□ -0.21
COL6A2-204ENST00000409416 GTSE1Q9NYZ3 720 aa13.72□□□□□ -0.21
COL6A2-204ENST00000409416 TPP1O14773 563 aa13.72□□□□□ -0.21
COL6A2-204ENST00000409416 NRP1O14786 923 aa13.72□□□□□ -0.21
COL6A2-204ENST00000409416 COL9A2Q14055 689 aaPredicted RBP13.72□□□□□ -0.21
COL6A2-204ENST00000409416 ANO4Q32M45 955 aa13.72□□□□□ -0.21
COL6A2-204ENST00000409416 BOLA3Q53S33 107 aa13.72□□□□□ -0.21
COL6A2-204ENST00000409416 WDR75Q8IWA0 830 aaKnown RBP13.72□□□□□ -0.21
COL6A2-204ENST00000409416 TRIM42Q8IWZ5 723 aa13.72□□□□□ -0.21
COL6A2-204ENST00000409416 ARRDC4Q8NCT1 418 aa13.72□□□□□ -0.21
COL6A2-204ENST00000409416 GSTCDQ8NEC7 633 aa13.72□□□□□ -0.21
COL6A2-204ENST00000409416 ZNF398Q8TD17 642 aa13.72□□□□□ -0.21
COL6A2-204ENST00000409416 FNIP1Q8TF40 1166 aa13.72□□□□□ -0.21
COL6A2-204ENST00000409416 ATP2A3Q93084 1043 aa13.72□□□□□ -0.21
COL6A2-204ENST00000409416 MCRS1Q96EZ8 462 aa13.72□□□□□ -0.21
COL6A2-204ENST00000409416 APBA2Q99767 749 aa13.72□□□□□ -0.21
COL6A2-204ENST00000409416 PHACTR1Q9C0D0 580 aa13.72□□□□□ -0.21
COL6A2-204ENST00000409416 C20orf27Q9GZN8 174 aa13.72□□□□□ -0.21
COL6A2-204ENST00000409416 PIDD1Q9HB75 910 aa13.72□□□□□ -0.21
COL6A2-204ENST00000409416 USP29Q9HBJ7 922 aa13.72□□□□□ -0.21
COL6A2-204ENST00000409416 XAB2Q9HCS7 855 aaKnown RBP13.72□□□□□ -0.21
COL6A2-204ENST00000409416 NMRK2Q9NPI5 230 aa13.72□□□□□ -0.21
COL6A2-204ENST00000409416 LNPEPQ9UIQ6 1025 aa13.72□□□□□ -0.21
COL6A2-204ENST00000409416 EFR3BQ9Y2G0 817 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms