RNA–Protein interactions for RNA: ENST00000366816.5

H3F3A-204, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3A, Length 799 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-204ENST00000366816 SEMA4AQ9H3S1 761 aa20.56■□□□□ 0.88
H3F3A-204ENST00000366816 THAP10Q9P2Z0 257 aaPredicted RBP20.56■□□□□ 0.88
H3F3A-204ENST00000366816 EBF1Q9UH73 591 aa20.56■□□□□ 0.88
H3F3A-204ENST00000366816 STON1Q9Y6Q2 735 aa20.56■□□□□ 0.88
H3F3A-204ENST00000366816 ITIH6Q6UXX5 1313 aa20.55■□□□□ 0.88
H3F3A-204ENST00000366816 DCLK1O15075 740 aa20.55■□□□□ 0.88
H3F3A-204ENST00000366816 AP5Z1O43299 807 aa20.55■□□□□ 0.88
H3F3A-204ENST00000366816 ENDOD1O94919 500 aa20.55■□□□□ 0.88
H3F3A-204ENST00000366816 LUC7L3O95232 432 aaKnown RBP20.55■□□□□ 0.88
H3F3A-204ENST00000366816 FTLP02792 175 aaPredicted RBP20.55■□□□□ 0.88
H3F3A-204ENST00000366816 IL12RB1P42701 662 aa20.55■□□□□ 0.88
H3F3A-204ENST00000366816 CDH18Q13634 790 aa20.55■□□□□ 0.88
H3F3A-204ENST00000366816 SIM2Q14190 667 aaPredicted RBP20.55■□□□□ 0.88
H3F3A-204ENST00000366816 ZNF234Q14588 700 aa20.55■□□□□ 0.88
H3F3A-204ENST00000366816 FUT11Q495W5 492 aa20.55■□□□□ 0.88
H3F3A-204ENST00000366816 TDRD12Q587J7 1177 aaKnown RBP20.55■□□□□ 0.88
H3F3A-204ENST00000366816 MBLAC2Q68D91 279 aa20.55■□□□□ 0.88
H3F3A-204ENST00000366816 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.55■□□□□ 0.88
H3F3A-204ENST00000366816 UCMAQ8WVF2 138 aa20.55■□□□□ 0.88
H3F3A-204ENST00000366816 SYN2Q92777 582 aaPredicted RBP20.55■□□□□ 0.88
H3F3A-204ENST00000366816 MCEEQ96PE7 176 aa20.55■□□□□ 0.88
H3F3A-204ENST00000366816 GABRG3Q99928 467 aa20.55■□□□□ 0.88
H3F3A-204ENST00000366816 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.55■□□□□ 0.88
H3F3A-204ENST00000366816 POLMQ9NP87 494 aaPredicted RBP20.55■□□□□ 0.88
H3F3A-204ENST00000366816 INTS6Q9UL03 887 aaKnown RBP20.55■□□□□ 0.88
H3F3A-204ENST00000366816 CCDC163A0A0D9SF12 145 aa20.54■□□□□ 0.88
H3F3A-204ENST00000366816 TIMM44O43615 452 aa20.54■□□□□ 0.88
H3F3A-204ENST00000366816 GPD1P21695 349 aa20.54■□□□□ 0.88
H3F3A-204ENST00000366816 EIF4HQ15056 248 aaKnown RBP20.54■□□□□ 0.88
H3F3A-204ENST00000366816 RABGAP1LQ5R372 815 aa20.54■□□□□ 0.88
H3F3A-204ENST00000366816 PPP1R15BQ5SWA1 713 aa20.54■□□□□ 0.88
H3F3A-204ENST00000366816 SPECC1LQ69YQ0 1117 aa20.54■□□□□ 0.88
H3F3A-204ENST00000366816 RASSF3Q86WH2 238 aa20.54■□□□□ 0.88
H3F3A-204ENST00000366816 CCDC117Q8IWD4 279 aaPredicted RBP20.54■□□□□ 0.88
H3F3A-204ENST00000366816 AHI1Q8N157 1196 aa20.54■□□□□ 0.88
H3F3A-204ENST00000366816 CCAR2Q8N163 923 aaKnown RBP20.54■□□□□ 0.88
H3F3A-204ENST00000366816 PGBD3Q8N328 593 aa20.54■□□□□ 0.88
H3F3A-204ENST00000366816 WFIKKN2Q8TEU8 576 aa20.54■□□□□ 0.88
H3F3A-204ENST00000366816 IQCDQ96DY2 449 aa20.54■□□□□ 0.88
H3F3A-204ENST00000366816 MAGEB5Q9BZ81 275 aa20.54■□□□□ 0.88
H3F3A-204ENST00000366816 SLC6A17Q9H1V8 727 aa20.54■□□□□ 0.88
H3F3A-204ENST00000366816 CD248Q9HCU0 757 aa20.54■□□□□ 0.88
H3F3A-204ENST00000366816 BCCIPQ9P287 314 aaKnown RBP eCLIP20.54■□□□□ 0.88
H3F3A-204ENST00000366816 ADAMTS1Q9UHI8 967 aa20.54■□□□□ 0.88
H3F3A-204ENST00000366816 SMG5Q9UPR3 1016 aaKnown RBP20.54■□□□□ 0.88
H3F3A-204ENST00000366816 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.54■□□□□ 0.88
H3F3A-204ENST00000366816 RPP40O75818 363 aaKnown RBP20.53■□□□□ 0.88
H3F3A-204ENST00000366816 CNTN5O94779 1100 aa20.53■□□□□ 0.88
H3F3A-204ENST00000366816 ALDH1A2O94788 518 aa20.53■□□□□ 0.88
H3F3A-204ENST00000366816 SERPING1P05155 500 aa20.53■□□□□ 0.88
H3F3A-204ENST00000366816 HLA-EP13747 358 aa20.53■□□□□ 0.88
H3F3A-204ENST00000366816 POLR2EP19388 210 aaKnown RBP20.53■□□□□ 0.88
H3F3A-204ENST00000366816 CNR2P34972 360 aa20.53■□□□□ 0.88
H3F3A-204ENST00000366816 PTPN9P43378 593 aa20.53■□□□□ 0.88
H3F3A-204ENST00000366816 PTPRNQ16849 979 aa20.53■□□□□ 0.88
H3F3A-204ENST00000366816 CEP68Q76N32 757 aa20.53■□□□□ 0.88
H3F3A-204ENST00000366816 VSTM4Q8IW00 320 aa20.53■□□□□ 0.88
H3F3A-204ENST00000366816 APCDD1Q8J025 514 aa20.53■□□□□ 0.88
H3F3A-204ENST00000366816 ZNF366Q8N895 744 aa20.53■□□□□ 0.88
H3F3A-204ENST00000366816 FAM172AQ8WUF8 416 aa20.53■□□□□ 0.88
H3F3A-204ENST00000366816 GAB3Q8WWW8 586 aa20.53■□□□□ 0.88
H3F3A-204ENST00000366816 CENPIQ92674 756 aaPredicted RBP20.53■□□□□ 0.88
H3F3A-204ENST00000366816 VCPIP1Q96JH7 1222 aa20.53■□□□□ 0.88
H3F3A-204ENST00000366816 RBSNQ9H1K0 784 aa20.53■□□□□ 0.88
H3F3A-204ENST00000366816 PAXBP1Q9Y5B6 917 aa20.53■□□□□ 0.88
H3F3A-204ENST00000366816 CCP110O43303 1012 aa20.52■□□□□ 0.88
H3F3A-204ENST00000366816 SRGAP2O75044 1071 aa20.52■□□□□ 0.88
H3F3A-204ENST00000366816 RTN2O75298 545 aa20.52■□□□□ 0.88
H3F3A-204ENST00000366816 GZMAP12544 262 aa20.52■□□□□ 0.88
H3F3A-204ENST00000366816 GABRG2P18507 467 aa20.52■□□□□ 0.88
H3F3A-204ENST00000366816 PRKCHP24723 683 aa20.52■□□□□ 0.88
H3F3A-204ENST00000366816 CSKP41240 450 aa20.52■□□□□ 0.88
H3F3A-204ENST00000366816 HDAC4P56524 1084 aa20.52■□□□□ 0.88
H3F3A-204ENST00000366816 OGDHQ02218 1023 aa20.52■□□□□ 0.88
H3F3A-204ENST00000366816 MTA1Q13330 715 aa20.52■□□□□ 0.88
H3F3A-204ENST00000366816 MAMLD1Q13495 774 aa20.52■□□□□ 0.88
H3F3A-204ENST00000366816 ENPP2Q13822 863 aa20.52■□□□□ 0.88
H3F3A-204ENST00000366816 FNDC3BQ53EP0 1204 aaKnown RBP20.52■□□□□ 0.88
H3F3A-204ENST00000366816 DCUN1D2Q6PH85 259 aa20.52■□□□□ 0.88
H3F3A-204ENST00000366816 ZNF683Q8IZ20 524 aa20.52■□□□□ 0.88
H3F3A-204ENST00000366816 DCLK2Q8N568 766 aa20.52■□□□□ 0.88
H3F3A-204ENST00000366816 FRMD1Q8N878 549 aa20.52■□□□□ 0.88
H3F3A-204ENST00000366816 OR52K2Q8NGK3 314 aa20.52■□□□□ 0.88
H3F3A-204ENST00000366816 RLN3Q8WXF3 142 aa20.52■□□□□ 0.88
H3F3A-204ENST00000366816 KIAA1522Q9P206 1035 aaPredicted RBP20.52■□□□□ 0.88
H3F3A-204ENST00000366816 PLA2G4CQ9UP65 541 aa20.52■□□□□ 0.88
H3F3A-204ENST00000366816 BZW2Q9Y6E2 419 aaKnown RBP20.52■□□□□ 0.88
H3F3A-204ENST00000366816 A0A1B0GVM2 712 aa20.51■□□□□ 0.87
H3F3A-204ENST00000366816 TCAF2A6NFQ2 919 aa20.51■□□□□ 0.87
H3F3A-204ENST00000366816 MZF1P28698 734 aaPredicted RBP20.51■□□□□ 0.87
H3F3A-204ENST00000366816 ADRA1BP35368 520 aa20.51■□□□□ 0.87
H3F3A-204ENST00000366816 CTSOP43234 321 aaPredicted RBP20.51■□□□□ 0.87
H3F3A-204ENST00000366816 ZNF143P52747 638 aaPredicted RBP20.51■□□□□ 0.87
H3F3A-204ENST00000366816 ALFQ53S48 1182 aa20.51■□□□□ 0.87
H3F3A-204ENST00000366816 PITRM1Q5JRX3 1037 aa20.51■□□□□ 0.87
H3F3A-204ENST00000366816 ARTNQ5T4W7 220 aa20.51■□□□□ 0.87
H3F3A-204ENST00000366816 TTC39BQ5VTQ0 682 aaPredicted RBP20.51■□□□□ 0.87
H3F3A-204ENST00000366816 PLEKHA7Q6IQ23 1121 aa20.51■□□□□ 0.87
H3F3A-204ENST00000366816 SERPINA13PQ6UXR4 307 aa20.51■□□□□ 0.87
H3F3A-204ENST00000366816 STRADAQ7RTN6 431 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms