RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 SLC26A9Q7LBE3 791 aa17.65■□□□□ 0.42
BRCC3-202ENST00000340647 CIR1Q86X95 450 aaPredicted RBP17.65■□□□□ 0.42
BRCC3-202ENST00000340647 MFN1Q8IWA4 741 aa17.65■□□□□ 0.42
BRCC3-202ENST00000340647 APCDD1Q8J025 514 aa17.65■□□□□ 0.42
BRCC3-202ENST00000340647 LGI2Q8N0V4 545 aa17.65■□□□□ 0.42
BRCC3-202ENST00000340647 ZNF397Q8NF99 534 aaPredicted RBP17.65■□□□□ 0.42
BRCC3-202ENST00000340647 OR52K2Q8NGK3 314 aa17.65■□□□□ 0.42
BRCC3-202ENST00000340647 OR2T3Q8NH03 318 aa17.65■□□□□ 0.42
BRCC3-202ENST00000340647 C1orf216Q8TAB5 229 aa17.65■□□□□ 0.42
BRCC3-202ENST00000340647 IGSF8Q969P0 613 aa17.65■□□□□ 0.42
BRCC3-202ENST00000340647 NT5C3BQ969T7 300 aa17.65■□□□□ 0.42
BRCC3-202ENST00000340647 SIPA1Q96FS4 1042 aa17.65■□□□□ 0.42
BRCC3-202ENST00000340647 BTN2A3PQ96KV6 586 aa17.65■□□□□ 0.42
BRCC3-202ENST00000340647 VPS16Q9H269 839 aa17.65■□□□□ 0.42
BRCC3-202ENST00000340647 FANCLQ9NW38 375 aa17.65■□□□□ 0.42
BRCC3-202ENST00000340647 F8VZ95 297 aa17.64■□□□□ 0.41
BRCC3-202ENST00000340647 HSF2BPO75031 334 aa17.64■□□□□ 0.41
BRCC3-202ENST00000340647 CHRNB2P17787 502 aa17.64■□□□□ 0.41
BRCC3-202ENST00000340647 ENGP17813 658 aa17.64■□□□□ 0.41
BRCC3-202ENST00000340647 RPS14P62263 151 aaKnown RBP17.64■□□□□ 0.41
BRCC3-202ENST00000340647 RAPGEF1Q13905 1077 aa17.64■□□□□ 0.41
BRCC3-202ENST00000340647 EFHC1Q5JVL4 640 aa17.64■□□□□ 0.41
BRCC3-202ENST00000340647 OR6B2Q6IFH4 312 aa17.64■□□□□ 0.41
BRCC3-202ENST00000340647 C14orf80Q86SX3 495 aa17.64■□□□□ 0.41
BRCC3-202ENST00000340647 CARNMT1Q8N4J0 409 aa17.64■□□□□ 0.41
BRCC3-202ENST00000340647 OR2I1PQ8NGU4 316 aa17.64■□□□□ 0.41
BRCC3-202ENST00000340647 DNASE2BQ8WZ79 361 aa17.64■□□□□ 0.41
BRCC3-202ENST00000340647 ALG14Q96F25 216 aa17.64■□□□□ 0.41
BRCC3-202ENST00000340647 NPY6RQ99463 290 aa17.64■□□□□ 0.41
BRCC3-202ENST00000340647 GPR174Q9BXC1 333 aa17.64■□□□□ 0.41
BRCC3-202ENST00000340647 STK33Q9BYT3 514 aa17.64■□□□□ 0.41
BRCC3-202ENST00000340647 TMEM9BQ9NQ34 198 aa17.64■□□□□ 0.41
BRCC3-202ENST00000340647 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.64■□□□□ 0.41
BRCC3-202ENST00000340647 SIK3Q9Y2K2 1263 aa17.64■□□□□ 0.41
BRCC3-202ENST00000340647 CHD5Q8TDI0 1954 aa17.64■□□□□ 0.41
BRCC3-202ENST00000340647 C10orf142B7Z368 130 aa17.63■□□□□ 0.41
BRCC3-202ENST00000340647 SYNCRIPO60506 623 aaKnown RBP17.63■□□□□ 0.41
BRCC3-202ENST00000340647 DAB1O75553 588 aa17.63■□□□□ 0.41
BRCC3-202ENST00000340647 PMLP29590 882 aa17.63■□□□□ 0.41
BRCC3-202ENST00000340647 HOXD12P35452 270 aa17.63■□□□□ 0.41
BRCC3-202ENST00000340647 KRT9P35527 623 aa17.63■□□□□ 0.41
BRCC3-202ENST00000340647 GGCXP38435 758 aa17.63■□□□□ 0.41
BRCC3-202ENST00000340647 NUMBP49757 651 aa17.63■□□□□ 0.41
BRCC3-202ENST00000340647 JAM2P57087 298 aa17.63■□□□□ 0.41
BRCC3-202ENST00000340647 FNDC3BQ53EP0 1204 aaKnown RBP17.63■□□□□ 0.41
BRCC3-202ENST00000340647 PITRM1Q5JRX3 1037 aa17.63■□□□□ 0.41
BRCC3-202ENST00000340647 TAF3Q5VWG9 929 aa17.63■□□□□ 0.41
BRCC3-202ENST00000340647 CXorf57Q6NSI4 855 aaKnown RBP17.63■□□□□ 0.41
BRCC3-202ENST00000340647 FBXL22Q6P050 247 aa17.63■□□□□ 0.41
BRCC3-202ENST00000340647 BNIPLQ7Z465 357 aa17.63■□□□□ 0.41
BRCC3-202ENST00000340647 XYLT1Q86Y38 959 aa17.63■□□□□ 0.41
BRCC3-202ENST00000340647 ZNF683Q8IZ20 524 aa17.63■□□□□ 0.41
BRCC3-202ENST00000340647 EPS8L1Q8TE68 723 aa17.63■□□□□ 0.41
BRCC3-202ENST00000340647 SLC20A1Q8WUM9 679 aa17.63■□□□□ 0.41
BRCC3-202ENST00000340647 PRCCQ92733 491 aaPredicted RBP17.63■□□□□ 0.41
BRCC3-202ENST00000340647 TRIM62Q9BVG3 475 aa17.63■□□□□ 0.41
BRCC3-202ENST00000340647 PIGVQ9NUD9 493 aa17.63■□□□□ 0.41
BRCC3-202ENST00000340647 DDIT4Q9NX09 232 aa17.63■□□□□ 0.41
BRCC3-202ENST00000340647 SLCO3A1Q9UIG8 710 aa17.63■□□□□ 0.41
BRCC3-202ENST00000340647 NOCTQ9UK39 431 aaKnown RBP17.63■□□□□ 0.41
BRCC3-202ENST00000340647 SLC6A14Q9UN76 642 aa17.63■□□□□ 0.41
BRCC3-202ENST00000340647 WDFY3Q8IZQ1 3526 aa17.62■□□□□ 0.41
BRCC3-202ENST00000340647 SYNJ2BP-COX16A0A087WUM0 186 aa17.62■□□□□ 0.41
BRCC3-202ENST00000340647 MMEP08473 750 aa17.62■□□□□ 0.41
BRCC3-202ENST00000340647 SERPINF2P08697 491 aa17.62■□□□□ 0.41
BRCC3-202ENST00000340647 POLR2EP19388 210 aaKnown RBP17.62■□□□□ 0.41
BRCC3-202ENST00000340647 KCNA4P22459 653 aa17.62■□□□□ 0.41
BRCC3-202ENST00000340647 MZF1P28698 734 aaPredicted RBP17.62■□□□□ 0.41
BRCC3-202ENST00000340647 ACSL1P33121 698 aa17.62■□□□□ 0.41
BRCC3-202ENST00000340647 NOS2P35228 1153 aa17.62■□□□□ 0.41
BRCC3-202ENST00000340647 CDK17Q00537 523 aa17.62■□□□□ 0.41
BRCC3-202ENST00000340647 BNC1Q01954 994 aa17.62■□□□□ 0.41
BRCC3-202ENST00000340647 CENPCQ03188 943 aa17.62■□□□□ 0.41
BRCC3-202ENST00000340647 DUOXA1Q1HG43 343 aa17.62■□□□□ 0.41
BRCC3-202ENST00000340647 PLEKHG6Q3KR16 790 aa17.62■□□□□ 0.41
BRCC3-202ENST00000340647 C5orf22Q49AR2 442 aa17.62■□□□□ 0.41
BRCC3-202ENST00000340647 CHSY1Q86X52 802 aa17.62■□□□□ 0.41
BRCC3-202ENST00000340647 DDX50Q9BQ39 737 aaKnown RBP17.62■□□□□ 0.41
BRCC3-202ENST00000340647 FAM204AQ9H8W3 233 aa17.62■□□□□ 0.41
BRCC3-202ENST00000340647 TMPRSS4Q9NRS4 437 aa17.62■□□□□ 0.41
BRCC3-202ENST00000340647 COX16Q9P0S2 106 aa17.62■□□□□ 0.41
BRCC3-202ENST00000340647 PLA2G4CQ9UP65 541 aa17.62■□□□□ 0.41
BRCC3-202ENST00000340647 ERVW-1Q9UQF0 538 aa17.62■□□□□ 0.41
BRCC3-202ENST00000340647 SNX10Q9Y5X0 201 aa17.62■□□□□ 0.41
BRCC3-202ENST00000340647 HS3ST4Q9Y661 456 aa17.62■□□□□ 0.41
BRCC3-202ENST00000340647 ASPMQ8IZT6 3477 aa17.62■□□□□ 0.41
BRCC3-202ENST00000340647 METTL12A8MUP2 240 aa17.61■□□□□ 0.41
BRCC3-202ENST00000340647 TTC34A8MYJ7 566 aa17.61■□□□□ 0.41
BRCC3-202ENST00000340647 ZBTB24O43167 697 aaPredicted RBP17.61■□□□□ 0.41
BRCC3-202ENST00000340647 SIN3BO75182 1162 aa17.61■□□□□ 0.41
BRCC3-202ENST00000340647 GJB3O75712 270 aa17.61■□□□□ 0.41
BRCC3-202ENST00000340647 ADCY5O95622 1261 aa17.61■□□□□ 0.41
BRCC3-202ENST00000340647 APOEP02649 317 aa17.61■□□□□ 0.41
BRCC3-202ENST00000340647 ATP5BP06576 529 aaKnown RBP17.61■□□□□ 0.41
BRCC3-202ENST00000340647 ZNF18P17022 549 aa17.61■□□□□ 0.41
BRCC3-202ENST00000340647 CCR1P32246 355 aa17.61■□□□□ 0.41
BRCC3-202ENST00000340647 FLT3P36888 993 aa17.61■□□□□ 0.41
BRCC3-202ENST00000340647 MATKP42679 507 aa17.61■□□□□ 0.41
BRCC3-202ENST00000340647 MAPK8P45983 427 aa17.61■□□□□ 0.41
BRCC3-202ENST00000340647 BPIFB4P59827 614 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms