RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 GJB3O75712 270 aa20.13■□□□□ 0.81
ITGA4-202ENST00000339307 SLC9A1P19634 815 aa20.13■□□□□ 0.81
ITGA4-202ENST00000339307 YWHAZP63104 245 aaKnown RBP20.13■□□□□ 0.81
ITGA4-202ENST00000339307 ZBTB16Q05516 673 aa20.13■□□□□ 0.81
ITGA4-202ENST00000339307 TEAD4Q15561 434 aa20.13■□□□□ 0.81
ITGA4-202ENST00000339307 TPD52L1Q16890 204 aaPredicted RBP20.13■□□□□ 0.81
ITGA4-202ENST00000339307 DCAF6Q58WW2 860 aa20.13■□□□□ 0.81
ITGA4-202ENST00000339307 FSCBQ5H9T9 825 aa20.13■□□□□ 0.81
ITGA4-202ENST00000339307 RNF219Q5W0B1 726 aaPredicted RBP20.13■□□□□ 0.81
ITGA4-202ENST00000339307 ENOSF1Q7L5Y1 443 aa20.13■□□□□ 0.81
ITGA4-202ENST00000339307 PNPLA1Q8N8W4 532 aa20.13■□□□□ 0.81
ITGA4-202ENST00000339307 SLC4A5Q9BY07 1137 aa20.13■□□□□ 0.81
ITGA4-202ENST00000339307 FAM204AQ9H8W3 233 aa20.13■□□□□ 0.81
ITGA4-202ENST00000339307 TM7SF3Q9NS93 570 aa20.13■□□□□ 0.81
ITGA4-202ENST00000339307 SLC12A6Q9UHW9 1150 aa20.13■□□□□ 0.81
ITGA4-202ENST00000339307 RWDD2AQ9UIY3 292 aa20.13■□□□□ 0.81
ITGA4-202ENST00000339307 NEUROG3Q9Y4Z2 214 aa20.13■□□□□ 0.81
ITGA4-202ENST00000339307 SIN3BO75182 1162 aa20.12■□□□□ 0.81
ITGA4-202ENST00000339307 LUC7L3O95232 432 aaKnown RBP20.12■□□□□ 0.81
ITGA4-202ENST00000339307 TRUB2O95900 331 aaKnown RBP20.12■□□□□ 0.81
ITGA4-202ENST00000339307 ASLP04424 464 aa20.12■□□□□ 0.81
ITGA4-202ENST00000339307 TACR2P21452 398 aa20.12■□□□□ 0.81
ITGA4-202ENST00000339307 AFF3P51826 1226 aaKnown RBP20.12■□□□□ 0.81
ITGA4-202ENST00000339307 ZNF423Q2M1K9 1284 aa20.12■□□□□ 0.81
ITGA4-202ENST00000339307 PITRM1Q5JRX3 1037 aa20.12■□□□□ 0.81
ITGA4-202ENST00000339307 TRIM65Q6PJ69 517 aa20.12■□□□□ 0.81
ITGA4-202ENST00000339307 GBP6Q6ZN66 633 aa20.12■□□□□ 0.81
ITGA4-202ENST00000339307 ADAT2Q7Z6V5 191 aaKnown RBP20.12■□□□□ 0.81
ITGA4-202ENST00000339307 PASD1Q8IV76 773 aa20.12■□□□□ 0.81
ITGA4-202ENST00000339307 STK32AQ8WU08 396 aa20.12■□□□□ 0.81
ITGA4-202ENST00000339307 TTC17Q96AE7 1141 aa20.12■□□□□ 0.81
ITGA4-202ENST00000339307 SLC39A13Q96H72 371 aa20.12■□□□□ 0.81
ITGA4-202ENST00000339307 PCED1AQ9H1Q7 454 aa20.12■□□□□ 0.81
ITGA4-202ENST00000339307 KIAA1522Q9P206 1035 aaPredicted RBP20.12■□□□□ 0.81
ITGA4-202ENST00000339307 KIAA1468Q9P260 1216 aa20.12■□□□□ 0.81
ITGA4-202ENST00000339307 CYTH4Q9UIA0 394 aa20.12■□□□□ 0.81
ITGA4-202ENST00000339307 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.12■□□□□ 0.81
ITGA4-202ENST00000339307 CTSOP43234 321 aaPredicted RBP20.11■□□□□ 0.81
ITGA4-202ENST00000339307 MTIF2P46199 727 aaKnown RBP20.11■□□□□ 0.81
ITGA4-202ENST00000339307 RPL34P49207 117 aaKnown RBP20.11■□□□□ 0.81
ITGA4-202ENST00000339307 APBA1Q02410 837 aa20.11■□□□□ 0.81
ITGA4-202ENST00000339307 PDCLQ13371 301 aa20.11■□□□□ 0.81
ITGA4-202ENST00000339307 NNTQ13423 1086 aa20.11■□□□□ 0.81
ITGA4-202ENST00000339307 TAF5Q15542 800 aa20.11■□□□□ 0.81
ITGA4-202ENST00000339307 ATP6V0D2Q8N8Y2 350 aa20.11■□□□□ 0.81
ITGA4-202ENST00000339307 ZCCHC14Q8WYQ9 949 aaKnown RBP20.11■□□□□ 0.81
ITGA4-202ENST00000339307 BIRC7Q96CA5 298 aa20.11■□□□□ 0.81
ITGA4-202ENST00000339307 BTN2A3PQ96KV6 586 aa20.11■□□□□ 0.81
ITGA4-202ENST00000339307 FAM81BQ96LP2 452 aa20.11■□□□□ 0.81
ITGA4-202ENST00000339307 THAP9Q9H5L6 903 aa20.11■□□□□ 0.81
ITGA4-202ENST00000339307 SGK2Q9HBY8 427 aa20.11■□□□□ 0.81
ITGA4-202ENST00000339307 FBXL12Q9NXK8 326 aa20.11■□□□□ 0.81
ITGA4-202ENST00000339307 INTS6Q9UL03 887 aaKnown RBP20.11■□□□□ 0.81
ITGA4-202ENST00000339307 ERVW-1Q9UQF0 538 aa20.11■□□□□ 0.81
ITGA4-202ENST00000339307 FNDC3AQ9Y2H6 1198 aaKnown RBP20.11■□□□□ 0.81
ITGA4-202ENST00000339307 MSRB2Q9Y3D2 182 aa20.11■□□□□ 0.81
ITGA4-202ENST00000339307 SLCO1B1Q9Y6L6 691 aa20.11■□□□□ 0.81
ITGA4-202ENST00000339307 TTC34A8MYJ7 566 aa20.1■□□□□ 0.81
ITGA4-202ENST00000339307 F5H5T6 163 aa20.1■□□□□ 0.81
ITGA4-202ENST00000339307 FTH1P19P0C7X4 201 aa20.1■□□□□ 0.81
ITGA4-202ENST00000339307 ABCB4P21439 1286 aa20.1■□□□□ 0.81
ITGA4-202ENST00000339307 CDK17Q00537 523 aa20.1■□□□□ 0.81
ITGA4-202ENST00000339307 LAYNQ6UX15 382 aa20.1■□□□□ 0.81
ITGA4-202ENST00000339307 TMEM110Q86TL2 294 aa20.1■□□□□ 0.81
ITGA4-202ENST00000339307 MMAAQ8IVH4 418 aaKnown RBP20.1■□□□□ 0.81
ITGA4-202ENST00000339307 RHBDD1Q8TEB9 315 aa20.1■□□□□ 0.81
ITGA4-202ENST00000339307 GATA6Q92908 595 aa20.1■□□□□ 0.81
ITGA4-202ENST00000339307 LMLNQ96KR4 655 aa20.1■□□□□ 0.81
ITGA4-202ENST00000339307 RPL10LQ96L21 214 aaKnown RBP20.1■□□□□ 0.81
ITGA4-202ENST00000339307 OMDQ99983 421 aa20.1■□□□□ 0.81
ITGA4-202ENST00000339307 RSPH9Q9H1X1 276 aaPredicted RBP20.1■□□□□ 0.81
ITGA4-202ENST00000339307 PABPC3Q9H361 631 aaKnown RBP20.1■□□□□ 0.81
ITGA4-202ENST00000339307 TM9SF3Q9HD45 589 aa20.1■□□□□ 0.81
ITGA4-202ENST00000339307 CACNA1EQ15878 2313 aa20.1■□□□□ 0.81
ITGA4-202ENST00000339307 MUC22E2RYF6 1773 aaPredicted RBP20.1■□□□□ 0.81
ITGA4-202ENST00000339307 TMEM8BA6NDV4 472 aa20.1■□□□□ 0.81
ITGA4-202ENST00000339307 GOLGA8CPA6NN73 597 aa20.1■□□□□ 0.81
ITGA4-202ENST00000339307 GRAP2O75791 330 aa20.1■□□□□ 0.81
ITGA4-202ENST00000339307 RNASEH2AO75792 299 aaKnown RBP20.1■□□□□ 0.81
ITGA4-202ENST00000339307 UBE2HP62256 183 aa20.1■□□□□ 0.81
ITGA4-202ENST00000339307 PITX1P78337 314 aaPredicted RBP20.1■□□□□ 0.81
ITGA4-202ENST00000339307 ECT2LQ008S8 904 aa20.1■□□□□ 0.81
ITGA4-202ENST00000339307 BNC1Q01954 994 aa20.1■□□□□ 0.81
ITGA4-202ENST00000339307 SFSWAPQ12872 951 aaKnown RBP20.1■□□□□ 0.81
ITGA4-202ENST00000339307 EXOC3L4Q17RC7 722 aa20.1■□□□□ 0.81
ITGA4-202ENST00000339307 KIF19Q2TAC6 998 aa20.1■□□□□ 0.81
ITGA4-202ENST00000339307 HNRNPA1L2Q32P51 320 aaKnown RBP20.1■□□□□ 0.81
ITGA4-202ENST00000339307 LRSAM1Q6UWE0 723 aa20.1■□□□□ 0.81
ITGA4-202ENST00000339307 BEND5Q7L4P6 421 aa20.1■□□□□ 0.81
ITGA4-202ENST00000339307 APCDD1Q8J025 514 aa20.1■□□□□ 0.81
ITGA4-202ENST00000339307 DEFB106AQ8N104 65 aa20.1■□□□□ 0.81
ITGA4-202ENST00000339307 KDF1Q8NAX2 398 aaPredicted RBP20.1■□□□□ 0.81
ITGA4-202ENST00000339307 SYNCQ9H7C4 482 aa20.1■□□□□ 0.81
ITGA4-202ENST00000339307 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.1■□□□□ 0.81
ITGA4-202ENST00000339307 DDIT4Q9NX09 232 aa20.1■□□□□ 0.81
ITGA4-202ENST00000339307 CHMP5Q9NZZ3 219 aa20.1■□□□□ 0.81
ITGA4-202ENST00000339307 APEX2Q9UBZ4 518 aa20.1■□□□□ 0.81
ITGA4-202ENST00000339307 RALYQ9UKM9 306 aaKnown RBP20.1■□□□□ 0.81
ITGA4-202ENST00000339307 PCOLCE2Q9UKZ9 415 aa20.1■□□□□ 0.81
ITGA4-202ENST00000339307 APOBEC2Q9Y235 224 aaKnown RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms