RNA–Protein interactions for RNA: ENST00000627622.1

CHD2-212, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene CHD2, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-212ENST00000627622 RAD23BP54727 409 aa9.04□□□□□ -0.96
CHD2-212ENST00000627622 C21orf59P57076 290 aa9.04□□□□□ -0.96
CHD2-212ENST00000627622 C19orf57Q0VDD7 668 aa9.04□□□□□ -0.96
CHD2-212ENST00000627622 C6orf118Q5T5N4 469 aa9.04□□□□□ -0.96
CHD2-212ENST00000627622 MBLAC2Q68D91 279 aa9.04□□□□□ -0.96
CHD2-212ENST00000627622 ZNF776Q68DI1 518 aaPredicted RBP9.04□□□□□ -0.96
CHD2-212ENST00000627622 KIAA0895LQ68EN5 471 aa9.04□□□□□ -0.96
CHD2-212ENST00000627622 USP30Q70CQ3 517 aa9.04□□□□□ -0.96
CHD2-212ENST00000627622 ZC3H3Q8IXZ2 948 aaKnown RBP9.04□□□□□ -0.96
CHD2-212ENST00000627622 PIP4K2CQ8TBX8 421 aa9.04□□□□□ -0.96
CHD2-212ENST00000627622 ADAM32Q8TC27 787 aa9.04□□□□□ -0.96
CHD2-212ENST00000627622 RNF139Q8WU17 664 aa9.04□□□□□ -0.96
CHD2-212ENST00000627622 NDRG1Q92597 394 aaKnown RBP9.04□□□□□ -0.96
CHD2-212ENST00000627622 ULBP1Q9BZM6 244 aa9.04□□□□□ -0.96
CHD2-212ENST00000627622 TMEM8AQ9HCN3 771 aa9.04□□□□□ -0.96
CHD2-212ENST00000627622 CISHQ9NSE2 258 aa9.04□□□□□ -0.96
CHD2-212ENST00000627622 SFMBT1Q9UHJ3 866 aa9.04□□□□□ -0.96
CHD2-212ENST00000627622 PTPRQQ9UMZ3 2332 aa9.04□□□□□ -0.96
CHD2-212ENST00000627622 KALRNO60229 2985 aa9.03□□□□□ -0.96
CHD2-212ENST00000627622 A0A1W2PPC4 97 aa9.03□□□□□ -0.96
CHD2-212ENST00000627622 K7ELQ4 463 aaPredicted RBP9.03□□□□□ -0.96
CHD2-212ENST00000627622 ENC1O14682 589 aa9.03□□□□□ -0.96
CHD2-212ENST00000627622 XPO1O14980 1071 aaKnown RBP9.03□□□□□ -0.96
CHD2-212ENST00000627622 LDOC1O95751 146 aaPredicted RBP9.03□□□□□ -0.96
CHD2-212ENST00000627622 MYL1P05976 194 aa9.03□□□□□ -0.96
CHD2-212ENST00000627622 C1SP09871 688 aa9.03□□□□□ -0.96
CHD2-212ENST00000627622 JUPP14923 745 aa9.03□□□□□ -0.96
CHD2-212ENST00000627622 GTF2H1P32780 548 aa9.03□□□□□ -0.96
CHD2-212ENST00000627622 PSMC2P35998 433 aaKnown RBP9.03□□□□□ -0.96
CHD2-212ENST00000627622 EIF2S3P41091 472 aaKnown RBP9.03□□□□□ -0.96
CHD2-212ENST00000627622 FOXD4L6Q3SYB3 417 aaPredicted RBP9.03□□□□□ -0.96
CHD2-212ENST00000627622 FOXD4L5Q5VV16 416 aaPredicted RBP9.03□□□□□ -0.96
CHD2-212ENST00000627622 KRT39Q6A163 491 aa9.03□□□□□ -0.96
CHD2-212ENST00000627622 FOXD4L3Q6VB84 417 aaPredicted RBP9.03□□□□□ -0.96
CHD2-212ENST00000627622 BHLHA9Q7RTU4 235 aa9.03□□□□□ -0.96
CHD2-212ENST00000627622 GATAD2AQ86YP4 633 aa9.03□□□□□ -0.96
CHD2-212ENST00000627622 FAM186BQ8IYM0 893 aa9.03□□□□□ -0.96
CHD2-212ENST00000627622 FOXD4L4Q8WXT5 416 aaPredicted RBP9.03□□□□□ -0.96
CHD2-212ENST00000627622 SKA1Q96BD8 255 aa9.03□□□□□ -0.96
CHD2-212ENST00000627622 NXPE2Q96DL1 559 aa9.03□□□□□ -0.96
CHD2-212ENST00000627622 ELF4Q99607 663 aaPredicted RBP9.03□□□□□ -0.96
CHD2-212ENST00000627622 RSPH9Q9H1X1 276 aaPredicted RBP9.03□□□□□ -0.96
CHD2-212ENST00000627622 ABCC13Q9NSE7 274 aa9.03□□□□□ -0.96
CHD2-212ENST00000627622 FLNBO75369 2602 aaKnown RBP9.03□□□□□ -0.96
CHD2-212ENST00000627622 FAM47DPA6NHR8 397 aa9.02□□□□□ -0.96
CHD2-212ENST00000627622 TULP2O00295 520 aa9.02□□□□□ -0.96
CHD2-212ENST00000627622 RNASEH1O60930 286 aaKnown RBP9.02□□□□□ -0.96
CHD2-212ENST00000627622 ZIC2O95409 532 aaPredicted RBP9.02□□□□□ -0.96
CHD2-212ENST00000627622 PRB1P04280 392 aa9.02□□□□□ -0.96
CHD2-212ENST00000627622 ABCB4P21439 1286 aa9.02□□□□□ -0.96
CHD2-212ENST00000627622 RPL13P26373 211 aaKnown RBP9.02□□□□□ -0.96
CHD2-212ENST00000627622 ITPKBP27987 946 aa9.02□□□□□ -0.96
CHD2-212ENST00000627622 CD70P32970 193 aa9.02□□□□□ -0.96
CHD2-212ENST00000627622 SGSHP51688 502 aa9.02□□□□□ -0.96
CHD2-212ENST00000627622 GALCP54803 685 aa9.02□□□□□ -0.96
CHD2-212ENST00000627622 MCCD1P59942 119 aaPredicted RBP9.02□□□□□ -0.96
CHD2-212ENST00000627622 ADIGQ0VDE8 80 aa9.02□□□□□ -0.96
CHD2-212ENST00000627622 SFSWAPQ12872 951 aaKnown RBP9.02□□□□□ -0.96
CHD2-212ENST00000627622 ADAM9Q13443 819 aa9.02□□□□□ -0.96
CHD2-212ENST00000627622 PRAMEF14Q5SWL7 426 aa9.02□□□□□ -0.96
CHD2-212ENST00000627622 MPP7Q5T2T1 576 aa9.02□□□□□ -0.96
CHD2-212ENST00000627622 BSPRYQ5W0U4 402 aa9.02□□□□□ -0.96
CHD2-212ENST00000627622 ATL3Q6DD88 541 aa9.02□□□□□ -0.96
CHD2-212ENST00000627622 LRRC69Q6ZNQ3 347 aa9.02□□□□□ -0.96
CHD2-212ENST00000627622 ZNF557Q8N988 423 aaPredicted RBP9.02□□□□□ -0.96
CHD2-212ENST00000627622 FBXL13Q8NEE6 735 aa9.02□□□□□ -0.96
CHD2-212ENST00000627622 WFDC5Q8TCV5 224 aa9.02□□□□□ -0.96
CHD2-212ENST00000627622 GANCQ8TET4 914 aa9.02□□□□□ -0.96
CHD2-212ENST00000627622 EDEM1Q92611 657 aa9.02□□□□□ -0.96
CHD2-212ENST00000627622 SEMA4DQ92854 862 aa9.02□□□□□ -0.96
CHD2-212ENST00000627622 MYO19Q96H55 970 aa9.02□□□□□ -0.96
CHD2-212ENST00000627622 CNDP2Q96KP4 475 aaKnown RBP9.02□□□□□ -0.96
CHD2-212ENST00000627622 SLC6A18Q96N87 628 aa9.02□□□□□ -0.96
CHD2-212ENST00000627622 IPO9Q96P70 1041 aaKnown RBP9.02□□□□□ -0.96
CHD2-212ENST00000627622 IRX2Q9BZI1 471 aaPredicted RBP9.02□□□□□ -0.96
CHD2-212ENST00000627622 PABPC3Q9H361 631 aaKnown RBP9.02□□□□□ -0.96
CHD2-212ENST00000627622 LRRC4Q9HBW1 653 aa9.02□□□□□ -0.96
CHD2-212ENST00000627622 RAB20Q9NX57 234 aa9.02□□□□□ -0.96
CHD2-212ENST00000627622 FBXL12Q9NXK8 326 aa9.02□□□□□ -0.96
CHD2-212ENST00000627622 USP25Q9UHP3 1055 aa9.02□□□□□ -0.96
CHD2-212ENST00000627622 TDRD6O60522 2096 aaKnown RBP9.02□□□□□ -0.96
CHD2-212ENST00000627622 LRRC72A6NJI9 287 aa9.02□□□□□ -0.97
CHD2-212ENST00000627622 YJEFN3A6XGL0 299 aa9.02□□□□□ -0.97
CHD2-212ENST00000627622 E7ENQ6 273 aa9.02□□□□□ -0.97
CHD2-212ENST00000627622 ATXN7O15265 892 aaPredicted RBP9.02□□□□□ -0.97
CHD2-212ENST00000627622 MSI1O43347 362 aaKnown RBP9.02□□□□□ -0.97
CHD2-212ENST00000627622 TLX3O43711 291 aaPredicted RBP9.02□□□□□ -0.97
CHD2-212ENST00000627622 TBL1XO60907 577 aa9.02□□□□□ -0.97
CHD2-212ENST00000627622 RFPL3O75679 317 aa9.02□□□□□ -0.97
CHD2-212ENST00000627622 WNT1P04628 370 aa9.02□□□□□ -0.97
CHD2-212ENST00000627622 ITGAVP06756 1048 aa9.02□□□□□ -0.97
CHD2-212ENST00000627622 CD38P28907 300 aa9.02□□□□□ -0.97
CHD2-212ENST00000627622 ST8SIA6P61647 398 aa9.02□□□□□ -0.97
CHD2-212ENST00000627622 SEMG2Q02383 582 aa9.02□□□□□ -0.97
CHD2-212ENST00000627622 BST2Q10589 180 aaKnown RBP9.02□□□□□ -0.97
CHD2-212ENST00000627622 DNAJC3Q13217 504 aa9.02□□□□□ -0.97
CHD2-212ENST00000627622 GOLGA7BQ2TAP0 167 aa9.02□□□□□ -0.97
CHD2-212ENST00000627622 SGO2Q562F6 1265 aa9.02□□□□□ -0.97
CHD2-212ENST00000627622 PIK3R6Q5UE93 754 aa9.02□□□□□ -0.97
CHD2-212ENST00000627622 RFWD3Q6PCD5 774 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms