RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 PI4K2AQ9BTU6 479 aa11.99□□□□□ -0.49
LINC00538-201ENST00000626109 APOL5Q9BWW9 433 aa11.99□□□□□ -0.49
LINC00538-201ENST00000626109 THAP2Q9H0W7 228 aa11.99□□□□□ -0.49
LINC00538-201ENST00000626109 SLC38A7Q9NVC3 462 aa11.99□□□□□ -0.49
LINC00538-201ENST00000626109 ETAA1Q9NY74 926 aa11.99□□□□□ -0.49
LINC00538-201ENST00000626109 KANSL3Q9P2N6 904 aa11.99□□□□□ -0.49
LINC00538-201ENST00000626109 UBQLN1Q9UMX0 589 aaKnown RBP11.99□□□□□ -0.49
LINC00538-201ENST00000626109 POLIQ9UNA4 740 aa11.99□□□□□ -0.49
LINC00538-201ENST00000626109 SMIM28A0A1B0GU29 152 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 GMNCA6NCL1 334 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 E7EVH7 732 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 H0Y626 953 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 H7C0S8 307 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 PTGESO14684 152 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 FTLP02792 175 aaPredicted RBP11.98□□□□□ -0.49
LINC00538-201ENST00000626109 THP07101 528 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 IMPDH2P12268 514 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 CLCN2P51788 898 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 IRX1P78414 480 aaPredicted RBP11.98□□□□□ -0.49
LINC00538-201ENST00000626109 SGCGQ13326 291 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 UAP1Q16222 522 aaPredicted RBP11.98□□□□□ -0.49
LINC00538-201ENST00000626109 DUOXA2Q1HG44 320 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 NAA35Q5VZE5 725 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 SPATA2LQ8IUW3 424 aaPredicted RBP11.98□□□□□ -0.49
LINC00538-201ENST00000626109 BEST2Q8NFU1 509 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 LMO3Q8TAP4 145 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 PHOSPHO2Q8TCD6 241 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 POP1Q99575 1024 aaKnown RBP11.98□□□□□ -0.49
LINC00538-201ENST00000626109 GDF15Q99988 308 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 PLVAPQ9BX97 442 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 FAM129AQ9BZQ8 928 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 MTUS1Q9ULD2 1270 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 PCDHGB6Q9Y5F9 930 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 ALG6Q9Y672 507 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 TTC3P53804 2025 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 PTPRJQ12913 1337 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 ANKRD65E5RJM6 399 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 CACNB4O00305 520 aaPredicted RBP11.98□□□□□ -0.49
LINC00538-201ENST00000626109 SOCS5O75159 536 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 ZNF254O75437 659 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 POMCP01189 267 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 ATP2A2P16615 1042 aaKnown RBP11.98□□□□□ -0.49
LINC00538-201ENST00000626109 RHCEP18577 417 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 GTF2H1P32780 548 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 IRS1P35568 1242 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 GRIK1P39086 918 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 ID4P47928 161 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 ATP5OP48047 213 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 GCLMP48507 274 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 GATMP50440 423 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 MFAP3P55082 362 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 RHDQ02161 417 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 RNASELQ05823 741 aaKnown RBP11.98□□□□□ -0.49
LINC00538-201ENST00000626109 KRT71Q3SY84 523 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 RASIP1Q5U651 963 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 DUPD1Q68J44 220 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 SLC30A6Q6NXT4 461 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 ANKRD52Q8NB46 1076 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 GSTCDQ8NEC7 633 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 MYCBPAPQ8TBZ2 947 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 CASD1Q96PB1 797 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 PPP1R10Q96QC0 940 aaKnown RBP11.98□□□□□ -0.49
LINC00538-201ENST00000626109 YME1L1Q96TA2 773 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 ZBED2Q9BTP6 218 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 MTMR12Q9C0I1 747 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 CXCL16Q9H2A7 254 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 DPH5Q9H2P9 285 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 TMEM8AQ9HCN3 771 aa11.98□□□□□ -0.49
LINC00538-201ENST00000626109 SUCOQ9UBS9 1254 aaKnown RBP11.98□□□□□ -0.49
LINC00538-201ENST00000626109 MTRF1LQ9UGC7 380 aaKnown RBP11.98□□□□□ -0.49
LINC00538-201ENST00000626109 CITO14578 2027 aa11.97□□□□□ -0.49
LINC00538-201ENST00000626109 AP3B1O00203 1094 aa11.97□□□□□ -0.49
LINC00538-201ENST00000626109 PHF2O75151 1096 aa11.97□□□□□ -0.49
LINC00538-201ENST00000626109 LRRN2O75325 713 aa11.97□□□□□ -0.49
LINC00538-201ENST00000626109 GJB5O95377 273 aa11.97□□□□□ -0.49
LINC00538-201ENST00000626109 POLBP06746 335 aa11.97□□□□□ -0.49
LINC00538-201ENST00000626109 CYP3A5P20815 502 aa11.97□□□□□ -0.49
LINC00538-201ENST00000626109 AFF1P51825 1210 aaKnown RBP11.97□□□□□ -0.49
LINC00538-201ENST00000626109 PPP3CAQ08209 521 aa11.97□□□□□ -0.49
LINC00538-201ENST00000626109 SHHQ15465 462 aa11.97□□□□□ -0.49
LINC00538-201ENST00000626109 CNGA3Q16281 694 aa11.97□□□□□ -0.49
LINC00538-201ENST00000626109 OXLD1Q5BKU9 147 aa11.97□□□□□ -0.49
LINC00538-201ENST00000626109 C9orf50Q5SZB4 431 aa11.97□□□□□ -0.49
LINC00538-201ENST00000626109 C1orf220Q5T0J3 134 aa11.97□□□□□ -0.49
LINC00538-201ENST00000626109 KRT39Q6A163 491 aa11.97□□□□□ -0.49
LINC00538-201ENST00000626109 FBXL19Q6PCT2 694 aa11.97□□□□□ -0.49
LINC00538-201ENST00000626109 TMCO2Q7Z6W1 182 aaPredicted RBP11.97□□□□□ -0.49
LINC00538-201ENST00000626109 HERC6Q8IVU3 1022 aa11.97□□□□□ -0.49
LINC00538-201ENST00000626109 OR5B17Q8NGF7 314 aa11.97□□□□□ -0.49
LINC00538-201ENST00000626109 OR52K2Q8NGK3 314 aa11.97□□□□□ -0.49
LINC00538-201ENST00000626109 SHC3Q92529 594 aa11.97□□□□□ -0.49
LINC00538-201ENST00000626109 FAM193BQ96PV7 902 aaPredicted RBP11.97□□□□□ -0.49
LINC00538-201ENST00000626109 TBCBQ99426 244 aa11.97□□□□□ -0.49
LINC00538-201ENST00000626109 TACO1Q9BSH4 297 aaKnown RBP11.97□□□□□ -0.49
LINC00538-201ENST00000626109 STMN4Q9H169 189 aaPredicted RBP11.97□□□□□ -0.49
LINC00538-201ENST00000626109 NEUROG2Q9H2A3 272 aa11.97□□□□□ -0.49
LINC00538-201ENST00000626109 LIN28AQ9H9Z2 209 aaKnown RBP11.97□□□□□ -0.49
LINC00538-201ENST00000626109 XAB2Q9HCS7 855 aaKnown RBP11.97□□□□□ -0.49
LINC00538-201ENST00000626109 TBC1D13Q9NVG8 400 aa11.97□□□□□ -0.49
LINC00538-201ENST00000626109 MIOSQ9NXC5 875 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms