RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 SIN3BO75182 1162 aa14.98□□□□□ -0.01
VPS36-207ENST00000611132 LYPLA2O95372 231 aa14.98□□□□□ -0.01
VPS36-207ENST00000611132 HOXD13P35453 343 aa14.98□□□□□ -0.01
VPS36-207ENST00000611132 AQP4P55087 323 aa14.98□□□□□ -0.01
VPS36-207ENST00000611132 KLF10Q13118 480 aa14.98□□□□□ -0.01
VPS36-207ENST00000611132 PCSK7Q16549 785 aa14.98□□□□□ -0.01
VPS36-207ENST00000611132 ANO4Q32M45 955 aa14.98□□□□□ -0.01
VPS36-207ENST00000611132 FUT11Q495W5 492 aa14.98□□□□□ -0.01
VPS36-207ENST00000611132 CAMK1DQ8IU85 385 aa14.98□□□□□ -0.01
VPS36-207ENST00000611132 ZNF280CQ8ND82 737 aa14.98□□□□□ -0.01
VPS36-207ENST00000611132 SERAC1Q96JX3 654 aa14.98□□□□□ -0.01
VPS36-207ENST00000611132 C9orf16Q9BUW7 83 aa14.98□□□□□ -0.01
VPS36-207ENST00000611132 OSBPL11Q9BXB4 747 aa14.98□□□□□ -0.01
VPS36-207ENST00000611132 PNPLA3Q9NST1 481 aa14.98□□□□□ -0.01
VPS36-207ENST00000611132 ITGB1BP2Q9UKP3 347 aa14.98□□□□□ -0.01
VPS36-207ENST00000611132 BARX2Q9UMQ3 279 aaPredicted RBP14.98□□□□□ -0.01
VPS36-207ENST00000611132 ITGA2BP08514 1039 aa14.97□□□□□ -0.01
VPS36-207ENST00000611132 TXNP10599 105 aaKnown RBP14.97□□□□□ -0.01
VPS36-207ENST00000611132 TAF2Q6P1X5 1199 aa14.97□□□□□ -0.01
VPS36-207ENST00000611132 SHCBP1Q8NEM2 672 aa14.97□□□□□ -0.01
VPS36-207ENST00000611132 KLHL33A6NCF5 533 aa14.97□□□□□ -0.01
VPS36-207ENST00000611132 E5RI56 91 aa14.97□□□□□ -0.01
VPS36-207ENST00000611132 E5RJQ4 531 aa14.97□□□□□ -0.01
VPS36-207ENST00000611132 TRIM38O00635 465 aa14.97□□□□□ -0.01
VPS36-207ENST00000611132 PMPCBO75439 489 aa14.97□□□□□ -0.01
VPS36-207ENST00000611132 RBP1P09455 135 aa14.97□□□□□ -0.01
VPS36-207ENST00000611132 UNGP13051 313 aaPredicted RBP14.97□□□□□ -0.01
VPS36-207ENST00000611132 PIK3R1P27986 724 aa14.97□□□□□ -0.01
VPS36-207ENST00000611132 GNL1P36915 607 aaPredicted RBP14.97□□□□□ -0.01
VPS36-207ENST00000611132 PPARGP37231 505 aaPredicted RBP14.97□□□□□ -0.01
VPS36-207ENST00000611132 CHRNB3Q05901 458 aa14.97□□□□□ -0.01
VPS36-207ENST00000611132 USP4Q13107 963 aa14.97□□□□□ -0.01
VPS36-207ENST00000611132 ST6GALNAC4Q9H4F1 302 aa14.97□□□□□ -0.01
VPS36-207ENST00000611132 UBIAD1Q9Y5Z9 338 aa14.97□□□□□ -0.01
VPS36-207ENST00000611132 CYP1A1P04798 512 aaPredicted RBP14.97□□□□□ -0.01
VPS36-207ENST00000611132 STAG3L1P0CL83 205 aa14.97□□□□□ -0.01
VPS36-207ENST00000611132 NDST1P52848 882 aa14.97□□□□□ -0.01
VPS36-207ENST00000611132 PSME3P61289 254 aa14.97□□□□□ -0.01
VPS36-207ENST00000611132 TRAF2Q12933 501 aa14.97□□□□□ -0.01
VPS36-207ENST00000611132 NFYCQ13952 458 aa14.97□□□□□ -0.01
VPS36-207ENST00000611132 CSHL1Q14406 222 aa14.97□□□□□ -0.01
VPS36-207ENST00000611132 TWF2Q6IBS0 349 aaKnown RBP14.97□□□□□ -0.01
VPS36-207ENST00000611132 ASRGL1Q7L266 308 aa14.97□□□□□ -0.01
VPS36-207ENST00000611132 EFL1Q7Z2Z2 1120 aaKnown RBP14.97□□□□□ -0.01
VPS36-207ENST00000611132 RAB26Q9ULW5 256 aa14.97□□□□□ -0.01
VPS36-207ENST00000611132 GNEQ9Y223 722 aaKnown RBP14.97□□□□□ -0.01
VPS36-207ENST00000611132 MYH7BA7E2Y1 1941 aa14.97□□□□□ -0.01
VPS36-207ENST00000611132 IGLV3-22A0A075B6J6 115 aa14.97□□□□□ -0.01
VPS36-207ENST00000611132 CCDC130P13994 396 aa14.97□□□□□ -0.01
VPS36-207ENST00000611132 NEK3P51956 506 aa14.97□□□□□ -0.01
VPS36-207ENST00000611132 DEFA1P59665 94 aa14.97□□□□□ -0.01
VPS36-207ENST00000611132 DEFA3P59666 94 aa14.97□□□□□ -0.01
VPS36-207ENST00000611132 LPIN1Q14693 890 aa14.97□□□□□ -0.01
VPS36-207ENST00000611132 ARMC3Q5W041 872 aa14.97□□□□□ -0.01
VPS36-207ENST00000611132 UNC5AQ6ZN44 842 aa14.97□□□□□ -0.01
VPS36-207ENST00000611132 GIPC3Q8TF64 312 aa14.97□□□□□ -0.01
VPS36-207ENST00000611132 UNKQ9C0B0 810 aaKnown RBP14.97□□□□□ -0.01
VPS36-207ENST00000611132 ATAD3AQ9NVI7 634 aa14.97□□□□□ -0.01
VPS36-207ENST00000611132 ZNF180Q9UJW8 692 aa14.97□□□□□ -0.01
VPS36-207ENST00000611132 ANKRD6Q9Y2G4 727 aa14.97□□□□□ -0.01
VPS36-207ENST00000611132 ARFGEF2Q9Y6D5 1785 aa14.96□□□□□ -0.01
VPS36-207ENST00000611132 TOPAZ1Q8N9V7 1692 aa14.96□□□□□ -0.01
VPS36-207ENST00000611132 HACD1B0YJ81 288 aa14.96□□□□□ -0.01
VPS36-207ENST00000611132 HBP1O60381 514 aa14.96□□□□□ -0.01
VPS36-207ENST00000611132 CETPP11597 493 aa14.96□□□□□ -0.01
VPS36-207ENST00000611132 PTPN7P35236 360 aa14.96□□□□□ -0.01
VPS36-207ENST00000611132 CCNFP41002 786 aa14.96□□□□□ -0.01
VPS36-207ENST00000611132 SPIRE1Q08AE8 756 aa14.96□□□□□ -0.01
VPS36-207ENST00000611132 JOSD2Q8TAC2 188 aa14.96□□□□□ -0.01
VPS36-207ENST00000611132 CERS2Q96G23 380 aa14.96□□□□□ -0.01
VPS36-207ENST00000611132 RIC8BQ9NVN3 520 aa14.96□□□□□ -0.01
VPS36-207ENST00000611132 CLEC11AQ9Y240 323 aa14.96□□□□□ -0.01
VPS36-207ENST00000611132 COQ4Q9Y3A0 265 aa14.96□□□□□ -0.01
VPS36-207ENST00000611132 A0A0A0MRY4 1105 aa14.96□□□□□ -0.01
VPS36-207ENST00000611132 TMEM114B3SHH9 223 aa14.96□□□□□ -0.01
VPS36-207ENST00000611132 CFAP99D6REC4 459 aa14.96□□□□□ -0.01
VPS36-207ENST00000611132 INPP4BO15327 924 aa14.96□□□□□ -0.01
VPS36-207ENST00000611132 ABCG1P45844 678 aa14.96□□□□□ -0.01
VPS36-207ENST00000611132 NOMO1Q15155 1222 aa14.96□□□□□ -0.01
VPS36-207ENST00000611132 CCDC81Q6ZN84 652 aa14.96□□□□□ -0.01
VPS36-207ENST00000611132 CERS5Q8N5B7 392 aa14.96□□□□□ -0.01
VPS36-207ENST00000611132 SPATA13Q96N96 652 aa14.96□□□□□ -0.01
VPS36-207ENST00000611132 FAM198AQ9UFP1 575 aa14.96□□□□□ -0.01
VPS36-207ENST00000611132 AAR2Q9Y312 384 aaKnown RBP14.96□□□□□ -0.01
VPS36-207ENST00000611132 SUPT3HB4E1H0 165 aa14.96□□□□□ -0.01
VPS36-207ENST00000611132 KCNK1O00180 336 aa14.96□□□□□ -0.01
VPS36-207ENST00000611132 CSDE1O75534 798 aaKnown RBP14.96□□□□□ -0.01
VPS36-207ENST00000611132 JCHAINP01591 159 aa14.96□□□□□ -0.01
VPS36-207ENST00000611132 EPHA3P29320 983 aa14.96□□□□□ -0.01
VPS36-207ENST00000611132 MSX2P35548 267 aaPredicted RBP14.96□□□□□ -0.01
VPS36-207ENST00000611132 PRKD1Q15139 912 aaPredicted RBP14.96□□□□□ -0.01
VPS36-207ENST00000611132 TNS4Q8IZW8 715 aa14.96□□□□□ -0.01
VPS36-207ENST00000611132 MAGED4Q96JG8 741 aa14.96□□□□□ -0.01
VPS36-207ENST00000611132 TRIM62Q9BVG3 475 aa14.96□□□□□ -0.01
VPS36-207ENST00000611132 RUBCNLQ9H714 662 aa14.96□□□□□ -0.01
VPS36-207ENST00000611132 RAP2CQ9Y3L5 183 aa14.96□□□□□ -0.01
VPS36-207ENST00000611132 PHGDHO43175 533 aaKnown RBP14.96□□□□□ -0.02
VPS36-207ENST00000611132 ARHGEF9O43307 516 aa14.96□□□□□ -0.02
VPS36-207ENST00000611132 ASS1P00966 412 aaKnown RBP14.96□□□□□ -0.02
VPS36-207ENST00000611132 BCAT1P54687 386 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms