RNA–Protein interactions for RNA: ENST00000610884.4

SNAPC3-207, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-207ENST00000610884 APRTP07741 180 aa18.78■□□□□ 0.6
SNAPC3-207ENST00000610884 PDIA2Q13087 525 aaKnown RBP18.78■□□□□ 0.6
SNAPC3-207ENST00000610884 VSTM1Q6UX27 236 aa18.78■□□□□ 0.6
SNAPC3-207ENST00000610884 CIR1Q86X95 450 aaPredicted RBP18.78■□□□□ 0.6
SNAPC3-207ENST00000610884 IGDCC3Q8IVU1 814 aa18.78■□□□□ 0.6
SNAPC3-207ENST00000610884 MYEOVQ96EZ4 313 aa18.78■□□□□ 0.6
SNAPC3-207ENST00000610884 FUBP3Q96I24 572 aaKnown RBP eCLIP18.78■□□□□ 0.6
SNAPC3-207ENST00000610884 ZBED2Q9BTP6 218 aa18.78■□□□□ 0.6
SNAPC3-207ENST00000610884 ALG13Q9NP73 1137 aaKnown RBP18.78■□□□□ 0.6
SNAPC3-207ENST00000610884 NINJ2Q9NZG7 142 aa18.78■□□□□ 0.6
SNAPC3-207ENST00000610884 DOCK6Q96HP0 2047 aa18.78■□□□□ 0.6
SNAPC3-207ENST00000610884 GOLGA6L7A0A1B0GV03 622 aa18.78■□□□□ 0.6
SNAPC3-207ENST00000610884 HAPLN1P10915 354 aaPredicted RBP18.78■□□□□ 0.6
SNAPC3-207ENST00000610884 TGM2P21980 687 aa18.78■□□□□ 0.6
SNAPC3-207ENST00000610884 IFI35P80217 286 aaPredicted RBP18.78■□□□□ 0.6
SNAPC3-207ENST00000610884 TFAP2DQ7Z6R9 452 aa18.78■□□□□ 0.6
SNAPC3-207ENST00000610884 MON1AQ86VX9 555 aa18.78■□□□□ 0.6
SNAPC3-207ENST00000610884 C7orf61Q8IZ16 206 aa18.78■□□□□ 0.6
SNAPC3-207ENST00000610884 TMEM199Q8N511 208 aa18.78■□□□□ 0.6
SNAPC3-207ENST00000610884 IRGQQ8WZA9 623 aa18.78■□□□□ 0.6
SNAPC3-207ENST00000610884 C8orf48Q96LL4 319 aa18.78■□□□□ 0.6
SNAPC3-207ENST00000610884 ZNF558Q96NG5 402 aa18.78■□□□□ 0.6
SNAPC3-207ENST00000610884 WDR83Q9BRX9 315 aaKnown RBP18.78■□□□□ 0.6
SNAPC3-207ENST00000610884 MCOLN1Q9GZU1 580 aa18.78■□□□□ 0.6
SNAPC3-207ENST00000610884 ETNK1Q9HBU6 452 aa18.78■□□□□ 0.6
SNAPC3-207ENST00000610884 VANGL2Q9ULK5 521 aa18.78■□□□□ 0.6
SNAPC3-207ENST00000610884 SHROOM3Q8TF72 1996 aa18.77■□□□□ 0.6
SNAPC3-207ENST00000610884 H3BRJ5 948 aa18.77■□□□□ 0.6
SNAPC3-207ENST00000610884 MYOGP15173 224 aa18.77■□□□□ 0.6
SNAPC3-207ENST00000610884 BBS9Q3SYG4 887 aa18.77■□□□□ 0.6
SNAPC3-207ENST00000610884 YTHDF3Q7Z739 585 aaKnown RBP18.77■□□□□ 0.6
SNAPC3-207ENST00000610884 AGGF1Q8N302 714 aaeCLIP18.77■□□□□ 0.6
SNAPC3-207ENST00000610884 RC3H2Q9HBD1 1191 aaKnown RBP18.77■□□□□ 0.6
SNAPC3-207ENST00000610884 PNPLA8Q9NP80 782 aa18.77■□□□□ 0.6
SNAPC3-207ENST00000610884 SLC12A6Q9UHW9 1150 aa18.77■□□□□ 0.6
SNAPC3-207ENST00000610884 NOVA2Q9UNW9 492 aaKnown RBP18.77■□□□□ 0.6
SNAPC3-207ENST00000610884 SCML2Q9UQR0 700 aa18.77■□□□□ 0.6
SNAPC3-207ENST00000610884 TRDMT1O14717 391 aaKnown RBP18.77■□□□□ 0.59
SNAPC3-207ENST00000610884 KIAA0355O15063 1070 aa18.77■□□□□ 0.59
SNAPC3-207ENST00000610884 DCLK1O15075 740 aa18.77■□□□□ 0.59
SNAPC3-207ENST00000610884 MAGEA4P43358 317 aa18.77■□□□□ 0.59
SNAPC3-207ENST00000610884 KCNQ1P51787 676 aa18.77■□□□□ 0.59
SNAPC3-207ENST00000610884 SEMA3BQ13214 749 aa18.77■□□□□ 0.59
SNAPC3-207ENST00000610884 SPARCL1Q14515 664 aa18.77■□□□□ 0.59
SNAPC3-207ENST00000610884 ARL13BQ3SXY8 428 aa18.77■□□□□ 0.59
SNAPC3-207ENST00000610884 SLC39A11Q8N1S5 342 aa18.77■□□□□ 0.59
SNAPC3-207ENST00000610884 COLGALT1Q8NBJ5 622 aa18.77■□□□□ 0.59
SNAPC3-207ENST00000610884 USP33Q8TEY7 942 aa18.77■□□□□ 0.59
SNAPC3-207ENST00000610884 P2RY11Q96G91 374 aa18.77■□□□□ 0.59
SNAPC3-207ENST00000610884 CABS1Q96KC9 395 aa18.77■□□□□ 0.59
SNAPC3-207ENST00000610884 FARP1Q9Y4F1 1045 aaPredicted RBP18.77■□□□□ 0.59
SNAPC3-207ENST00000610884 SLC38A8A6NNN8 435 aa18.76■□□□□ 0.59
SNAPC3-207ENST00000610884 GJB5O95377 273 aa18.76■□□□□ 0.59
SNAPC3-207ENST00000610884 PARNO95453 639 aaKnown RBP18.76■□□□□ 0.59
SNAPC3-207ENST00000610884 IGLV3-25P01717 112 aa18.76■□□□□ 0.59
SNAPC3-207ENST00000610884 SSTR1P30872 391 aa18.76■□□□□ 0.59
SNAPC3-207ENST00000610884 NAT8LQ8N9F0 302 aa18.76■□□□□ 0.59
SNAPC3-207ENST00000610884 ZNF512Q96ME7 567 aaPredicted RBP18.76■□□□□ 0.59
SNAPC3-207ENST00000610884 AGAP3Q96P47 875 aa18.76■□□□□ 0.59
SNAPC3-207ENST00000610884 CYP2S1Q96SQ9 504 aa18.76■□□□□ 0.59
SNAPC3-207ENST00000610884 GKN1Q9NS71 199 aa18.76■□□□□ 0.59
SNAPC3-207ENST00000610884 UBP1Q9NZI7 540 aa18.76■□□□□ 0.59
SNAPC3-207ENST00000610884 MTRRQ9UBK8 725 aa18.76■□□□□ 0.59
SNAPC3-207ENST00000610884 EFEMP2O95967 443 aa18.76■□□□□ 0.59
SNAPC3-207ENST00000610884 CRADDP78560 199 aa18.76■□□□□ 0.59
SNAPC3-207ENST00000610884 ELAVL2Q12926 359 aaKnown RBP18.76■□□□□ 0.59
SNAPC3-207ENST00000610884 EIF4EBP2Q13542 120 aaPredicted RBP18.76■□□□□ 0.59
SNAPC3-207ENST00000610884 SLC45A4Q5BKX6 768 aa18.76■□□□□ 0.59
SNAPC3-207ENST00000610884 HEATR6Q6AI08 1181 aaKnown RBP18.76■□□□□ 0.59
SNAPC3-207ENST00000610884 ZCCHC9Q8N567 271 aaKnown RBP18.76■□□□□ 0.59
SNAPC3-207ENST00000610884 TFB1MQ8WVM0 346 aaKnown RBP18.76■□□□□ 0.59
SNAPC3-207ENST00000610884 PGAP3Q96FM1 320 aaPredicted RBP18.76■□□□□ 0.59
SNAPC3-207ENST00000610884 TTLL3Q9Y4R7 772 aa18.76■□□□□ 0.59
SNAPC3-207ENST00000610884 HS3ST4Q9Y661 456 aa18.76■□□□□ 0.59
SNAPC3-207ENST00000610884 SLC12A8A0AV02 714 aa18.75■□□□□ 0.59
SNAPC3-207ENST00000610884 H7C4K7 107 aa18.75■□□□□ 0.59
SNAPC3-207ENST00000610884 DFFAO00273 331 aa18.75■□□□□ 0.59
SNAPC3-207ENST00000610884 TTC4O95801 387 aa18.75■□□□□ 0.59
SNAPC3-207ENST00000610884 F9P00740 461 aa18.75■□□□□ 0.59
SNAPC3-207ENST00000610884 PAX3P23760 479 aa18.75■□□□□ 0.59
SNAPC3-207ENST00000610884 SWT1Q5T5J6 900 aaKnown RBP18.75■□□□□ 0.59
SNAPC3-207ENST00000610884 PIK3R6Q5UE93 754 aa18.75■□□□□ 0.59
SNAPC3-207ENST00000610884 SLC8B1Q6J4K2 584 aa18.75■□□□□ 0.59
SNAPC3-207ENST00000610884 ANKLE1Q8NAG6 615 aa18.75■□□□□ 0.59
SNAPC3-207ENST00000610884 HTR3CQ8WXA8 447 aa18.75■□□□□ 0.59
SNAPC3-207ENST00000610884 SMOC2Q9H3U7 446 aa18.75■□□□□ 0.59
SNAPC3-207ENST00000610884 GMNCA6NCL1 334 aa18.75■□□□□ 0.59
SNAPC3-207ENST00000610884 GRXCR1A8MXD5 290 aa18.75■□□□□ 0.59
SNAPC3-207ENST00000610884 USP12O75317 370 aa18.75■□□□□ 0.59
SNAPC3-207ENST00000610884 CNTN5O94779 1100 aa18.75■□□□□ 0.59
SNAPC3-207ENST00000610884 SOD2P04179 222 aa18.75■□□□□ 0.59
SNAPC3-207ENST00000610884 CREB1P16220 341 aa18.75■□□□□ 0.59
SNAPC3-207ENST00000610884 STIP1P31948 543 aaKnown RBP18.75■□□□□ 0.59
SNAPC3-207ENST00000610884 CCR1P32246 355 aa18.75■□□□□ 0.59
SNAPC3-207ENST00000610884 PPP2R2AP63151 447 aa18.75■□□□□ 0.59
SNAPC3-207ENST00000610884 EFTUD2Q15029 972 aaKnown RBP eCLIP18.75■□□□□ 0.592e-6■■■■□ 23.1
SNAPC3-207ENST00000610884 QPCTQ16769 361 aa18.75■□□□□ 0.59
SNAPC3-207ENST00000610884 SPPL2BQ8TCT7 592 aa18.75■□□□□ 0.59
SNAPC3-207ENST00000610884 FBXO44Q9H4M3 255 aa18.75■□□□□ 0.59
SNAPC3-207ENST00000610884 YY1AP1Q9H869 796 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms