RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 FKBP15Q5T1M5 1219 aa10.9□□□□□ -0.66
CCDC9-203ENST00000596938 CCDC183Q5T5S1 534 aa10.9□□□□□ -0.66
CCDC9-203ENST00000596938 STPG1Q5TH74 334 aa10.9□□□□□ -0.66
CCDC9-203ENST00000596938 PEAR1Q5VY43 1037 aaPredicted RBP10.9□□□□□ -0.66
CCDC9-203ENST00000596938 MBLAC2Q68D91 279 aa10.9□□□□□ -0.66
CCDC9-203ENST00000596938 OR6B2Q6IFH4 312 aa10.9□□□□□ -0.66
CCDC9-203ENST00000596938 FAM183BPQ6ZVS7 135 aa10.9□□□□□ -0.66
CCDC9-203ENST00000596938 ZNF677Q86XU0 584 aa10.9□□□□□ -0.66
CCDC9-203ENST00000596938 TMPRSS6Q8IU80 811 aa10.9□□□□□ -0.66
CCDC9-203ENST00000596938 CCDC117Q8IWD4 279 aaPredicted RBP10.9□□□□□ -0.66
CCDC9-203ENST00000596938 ATP6V0D2Q8N8Y2 350 aa10.9□□□□□ -0.66
CCDC9-203ENST00000596938 MYEOVQ96EZ4 313 aa10.9□□□□□ -0.66
CCDC9-203ENST00000596938 ZNF419Q96HQ0 510 aaPredicted RBP10.9□□□□□ -0.66
CCDC9-203ENST00000596938 PRICKLE1Q96MT3 831 aaPredicted RBP10.9□□□□□ -0.66
CCDC9-203ENST00000596938 NUCKS1Q9H1E3 243 aaKnown RBP10.9□□□□□ -0.66
CCDC9-203ENST00000596938 GANQ9H2C0 597 aa10.9□□□□□ -0.66
CCDC9-203ENST00000596938 PDCL3Q9H2J4 239 aa10.9□□□□□ -0.66
CCDC9-203ENST00000596938 SMOC1Q9H4F8 434 aa10.9□□□□□ -0.66
CCDC9-203ENST00000596938 SYNCQ9H7C4 482 aa10.9□□□□□ -0.66
CCDC9-203ENST00000596938 RXFP3Q9NSD7 469 aa10.9□□□□□ -0.66
CCDC9-203ENST00000596938 DDIT4Q9NX09 232 aa10.9□□□□□ -0.66
CCDC9-203ENST00000596938 RRN3Q9NYV6 651 aa10.9□□□□□ -0.66
CCDC9-203ENST00000596938 STIM2Q9P246 746 aa10.9□□□□□ -0.66
CCDC9-203ENST00000596938 USP36Q9P275 1121 aaKnown RBP10.9□□□□□ -0.66
CCDC9-203ENST00000596938 LIMA1Q9UHB6 759 aaKnown RBP10.9□□□□□ -0.66
CCDC9-203ENST00000596938 EVLQ9UI08 416 aaPredicted RBP10.9□□□□□ -0.66
CCDC9-203ENST00000596938 DCDC2BA2VCK2 349 aa10.89□□□□□ -0.67
CCDC9-203ENST00000596938 F8VZ95 297 aa10.89□□□□□ -0.67
CCDC9-203ENST00000596938 MOCS2O96007 188 aaPredicted RBP10.89□□□□□ -0.67
CCDC9-203ENST00000596938 IGLV3-19P01714 112 aa10.89□□□□□ -0.67
CCDC9-203ENST00000596938 ASLP04424 464 aa10.89□□□□□ -0.67
CCDC9-203ENST00000596938 EPHX1P07099 455 aa10.89□□□□□ -0.67
CCDC9-203ENST00000596938 ZNF18P17022 549 aa10.89□□□□□ -0.67
CCDC9-203ENST00000596938 ABCB4P21439 1286 aa10.89□□□□□ -0.67
CCDC9-203ENST00000596938 PRKCHP24723 683 aa10.89□□□□□ -0.67
CCDC9-203ENST00000596938 CD6P30203 668 aa10.89□□□□□ -0.67
CCDC9-203ENST00000596938 OXTRP30559 389 aa10.89□□□□□ -0.67
CCDC9-203ENST00000596938 CD70P32970 193 aa10.89□□□□□ -0.67
CCDC9-203ENST00000596938 MATKP42679 507 aa10.89□□□□□ -0.67
CCDC9-203ENST00000596938 COPAP53621 1224 aa10.89□□□□□ -0.67
CCDC9-203ENST00000596938 NCAPHQ15003 741 aa10.89□□□□□ -0.67
CCDC9-203ENST00000596938 LYSMD4Q5XG99 296 aa10.89□□□□□ -0.67
CCDC9-203ENST00000596938 NOP9Q86U38 636 aaKnown RBP10.89□□□□□ -0.67
CCDC9-203ENST00000596938 ERICH1Q86X53 443 aa10.89□□□□□ -0.67
CCDC9-203ENST00000596938 MFN1Q8IWA4 741 aa10.89□□□□□ -0.67
CCDC9-203ENST00000596938 LGI2Q8N0V4 545 aa10.89□□□□□ -0.67
CCDC9-203ENST00000596938 CFAP52Q8N1V2 620 aa10.89□□□□□ -0.67
CCDC9-203ENST00000596938 KDM1BQ8NB78 822 aa10.89□□□□□ -0.67
CCDC9-203ENST00000596938 ANKRD20A12PQ8NF67 263 aa10.89□□□□□ -0.67
CCDC9-203ENST00000596938 OR2T3Q8NH03 318 aa10.89□□□□□ -0.67
CCDC9-203ENST00000596938 CEP76Q8TAP6 659 aa10.89□□□□□ -0.67
CCDC9-203ENST00000596938 WFDC5Q8TCV5 224 aa10.89□□□□□ -0.67
CCDC9-203ENST00000596938 EPS8L1Q8TE68 723 aa10.89□□□□□ -0.67
CCDC9-203ENST00000596938 PIGKQ92643 395 aa10.89□□□□□ -0.67
CCDC9-203ENST00000596938 PRCCQ92733 491 aaPredicted RBP10.89□□□□□ -0.67
CCDC9-203ENST00000596938 RNF34Q969K3 372 aa10.89□□□□□ -0.67
CCDC9-203ENST00000596938 NT5C3BQ969T7 300 aa10.89□□□□□ -0.67
CCDC9-203ENST00000596938 C18orf8Q96DM3 657 aa10.89□□□□□ -0.67
CCDC9-203ENST00000596938 SIPA1Q96FS4 1042 aa10.89□□□□□ -0.67
CCDC9-203ENST00000596938 PRMT1Q99873 361 aaKnown RBP10.89□□□□□ -0.67
CCDC9-203ENST00000596938 SLC6A17Q9H1V8 727 aa10.89□□□□□ -0.67
CCDC9-203ENST00000596938 FAM204AQ9H8W3 233 aa10.89□□□□□ -0.67
CCDC9-203ENST00000596938 FBRSQ9HAH7 460 aa10.89□□□□□ -0.67
CCDC9-203ENST00000596938 TMEM74BQ9NUR3 256 aa10.89□□□□□ -0.67
CCDC9-203ENST00000596938 WSB2Q9NYS7 404 aaPredicted RBP10.89□□□□□ -0.67
CCDC9-203ENST00000596938 KIAA1522Q9P206 1035 aaPredicted RBP10.89□□□□□ -0.67
CCDC9-203ENST00000596938 SUN2Q9UH99 717 aa10.89□□□□□ -0.67
CCDC9-203ENST00000596938 XPO7Q9UIA9 1087 aaKnown RBP10.89□□□□□ -0.67
CCDC9-203ENST00000596938 PILRBQ9UKJ0 227 aa10.89□□□□□ -0.67
CCDC9-203ENST00000596938 CYP8B1Q9UNU6 501 aa10.89□□□□□ -0.67
CCDC9-203ENST00000596938 SIK3Q9Y2K2 1263 aa10.89□□□□□ -0.67
CCDC9-203ENST00000596938 MYO16Q9Y6X6 1858 aa10.89□□□□□ -0.67
CCDC9-203ENST00000596938 LNP1A1A4G5 178 aa10.88□□□□□ -0.67
CCDC9-203ENST00000596938 LGALS16A8MUM7 142 aa10.88□□□□□ -0.67
CCDC9-203ENST00000596938 F5H5T6 163 aa10.88□□□□□ -0.67
CCDC9-203ENST00000596938 M0QYT0 321 aa10.88□□□□□ -0.67
CCDC9-203ENST00000596938 NDUFS2O75306 463 aa10.88□□□□□ -0.67
CCDC9-203ENST00000596938 DAB1O75553 588 aa10.88□□□□□ -0.67
CCDC9-203ENST00000596938 GRAP2O75791 330 aa10.88□□□□□ -0.67
CCDC9-203ENST00000596938 LUC7L3O95232 432 aaKnown RBP10.88□□□□□ -0.67
CCDC9-203ENST00000596938 F9P00740 461 aa10.88□□□□□ -0.67
CCDC9-203ENST00000596938 CDK11BP21127 795 aaKnown RBP10.88□□□□□ -0.67
CCDC9-203ENST00000596938 TACR2P21452 398 aa10.88□□□□□ -0.67
CCDC9-203ENST00000596938 ITPKAP23677 461 aa10.88□□□□□ -0.67
CCDC9-203ENST00000596938 TPMTP51580 245 aa10.88□□□□□ -0.67
CCDC9-203ENST00000596938 COPB1P53618 953 aaKnown RBP10.88□□□□□ -0.67
CCDC9-203ENST00000596938 OXCT1P55809 520 aa10.88□□□□□ -0.67
CCDC9-203ENST00000596938 JAM2P57087 298 aa10.88□□□□□ -0.67
CCDC9-203ENST00000596938 POLR2FP61218 127 aaKnown RBP10.88□□□□□ -0.67
CCDC9-203ENST00000596938 IRX4P78413 519 aa10.88□□□□□ -0.67
CCDC9-203ENST00000596938 ZBTB16Q05516 673 aa10.88□□□□□ -0.67
CCDC9-203ENST00000596938 ZNF33AQ06730 810 aa10.88□□□□□ -0.67
CCDC9-203ENST00000596938 LMAN2Q12907 356 aa10.88□□□□□ -0.67
CCDC9-203ENST00000596938 SLC12A1Q13621 1099 aa10.88□□□□□ -0.67
CCDC9-203ENST00000596938 CDH18Q13634 790 aa10.88□□□□□ -0.67
CCDC9-203ENST00000596938 ARID5BQ14865 1188 aa10.88□□□□□ -0.67
CCDC9-203ENST00000596938 FNDC3BQ53EP0 1204 aaKnown RBP10.88□□□□□ -0.67
CCDC9-203ENST00000596938 FSCBQ5H9T9 825 aa10.88□□□□□ -0.67
CCDC9-203ENST00000596938 TTC39BQ5VTQ0 682 aaPredicted RBP10.88□□□□□ -0.67
CCDC9-203ENST00000596938 RAP1GAP2Q684P5 730 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 1518.9 ms