RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 COL6A3P12111 3177 aa5.97□□□□□ -1.45
SDF2-206ENST00000587788 ABHD14A-ACY1A0A1B0GW23 586 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 A0A1W2PP55 124 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 FAM170AA1A519 330 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 C3orf70A6NLC5 250 aaPredicted RBP5.96□□□□□ -1.46
SDF2-206ENST00000587788 SMIM23A6NLE4 172 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 PI4K2BG5E9Z4 385 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 GOLGA8SH3BPF8 625 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 M0QYV0 167 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 SGK1O00141 431 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 C2CD2LO14523 706 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 SCAMP3O14828 347 aaKnown RBP5.96□□□□□ -1.46
SDF2-206ENST00000587788 MCF2LO15068 1137 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 PRPSAP2O60256 369 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 MGEA5O60502 916 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 EFCAB14O75071 495 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 ENDOD1O94919 500 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 TRUB2O95900 331 aaKnown RBP5.96□□□□□ -1.46
SDF2-206ENST00000587788 ALDH2P05091 517 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 CA3P07451 260 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 GSTA1P08263 222 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 VSIG8P0DPA2 414 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 KRT10P13645 584 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 BRAFP15056 766 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 ZFXP17010 805 aaPredicted RBP5.96□□□□□ -1.46
SDF2-206ENST00000587788 GPD1P21695 349 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 AKAP5P24588 427 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 LRPAP1P30533 357 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 CHKAP35790 457 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 GJC1P36383 396 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 ACADSBP45954 432 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 GPLD1P80108 840 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 IL9RQ01113 521 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 OGDHQ02218 1023 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 SLC25A11Q02978 314 aaKnown RBP5.96□□□□□ -1.46
SDF2-206ENST00000587788 IFT88Q13099 833 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 IKBKEQ14164 716 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 GRM2Q14416 872 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 KLHL38Q2WGJ6 581 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 SV2CQ496J9 727 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 LACTB2Q53H82 288 aaPredicted RBP5.96□□□□□ -1.46
SDF2-206ENST00000587788 C2CD6Q53TS8 623 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 RNF187Q5TA31 235 aaPredicted RBP5.96□□□□□ -1.46
SDF2-206ENST00000587788 RNASEH2BQ5TBB1 312 aaKnown RBP5.96□□□□□ -1.46
SDF2-206ENST00000587788 CYP4A22Q5TCH4 519 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 ZNF468Q5VIY5 522 aaPredicted RBP5.96□□□□□ -1.46
SDF2-206ENST00000587788 KAZNQ674X7 775 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 ARHGAP17Q68EM7 881 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 LLGL2Q6P1M3 1020 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 DCLRE1AQ6PJP8 1040 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 RAB44Q7Z6P3 723 aaPredicted RBP5.96□□□□□ -1.46
SDF2-206ENST00000587788 RTN4RL1Q86UN2 441 aaPredicted RBP5.96□□□□□ -1.46
SDF2-206ENST00000587788 TMEM192Q8IY95 271 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 VWA5B2Q8N398 1253 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 GBP7Q8N8V2 638 aaPredicted RBP5.96□□□□□ -1.46
SDF2-206ENST00000587788 CEP120Q8N960 986 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 SPATA18Q8TC71 538 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 DYDC1Q8WWB3 177 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 BHMTQ93088 406 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 TIFAQ96CG3 184 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 HAUS1Q96CS2 278 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 FAM84AQ96KN4 292 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 SNX27Q96L92 541 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 CNTNAP3BQ96NU0 1288 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 CPXM1Q96SM3 734 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 SLC9A7Q96T83 725 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 HERPUD2Q9BSE4 406 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 DDX23Q9BUQ8 820 aaKnown RBP5.96□□□□□ -1.46
SDF2-206ENST00000587788 CNTNAP3Q9BZ76 1288 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 ELOVL4Q9GZR5 314 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 MTIF3Q9H2K0 278 aaKnown RBP5.96□□□□□ -1.46
SDF2-206ENST00000587788 ADAM7Q9H2U9 754 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 SMYD3Q9H7B4 428 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 LATS2Q9NRM7 1088 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 METTL5Q9NRN9 209 aaKnown RBP5.96□□□□□ -1.46
SDF2-206ENST00000587788 GDAP2Q9NXN4 497 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 HESX1Q9UBX0 185 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 VTI1BQ9UEU0 232 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 USP18Q9UMW8 372 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 NAALADL1Q9UQQ1 740 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 PCDHA11Q9Y5I1 949 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 ANK1P16157 1881 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 CITO14578 2027 aa5.96□□□□□ -1.46
SDF2-206ENST00000587788 EXOC1LA0A1B0GW35 172 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 TMEM120BA0PK00 339 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 CDC14CA4D256 554 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 ARL5CA6NH57 179 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 EPOPA6NHQ4 379 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 FAM47DPA6NHR8 397 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 C2CD4BA6NLJ0 364 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 CCT8L1PA6NM43 557 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 KPNA7A9QM74 516 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 C9IYK1 514 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 H0YHG0 523 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 H3BM21 787 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 RFXAPO00287 272 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 MDM4O15151 490 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 INPPL1O15357 1258 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 PRPF4O43172 522 aaKnown RBP eCLIP5.95□□□□□ -1.46
SDF2-206ENST00000587788 CST8O60676 142 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms