RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820	TAGLN3	Q9UI15	199 aa		12.34	□□□□□ -0.43
SPG7-222	ENST00000569820	RABGEF1	Q9UJ41	708 aa		12.34	□□□□□ -0.43
SPG7-222	ENST00000569820	TLR3	O15455	904 aa	Known RBP	12.34	□□□□□ -0.43
SPG7-222	ENST00000569820	SEPT4	O43236	478 aa		12.34	□□□□□ -0.43
SPG7-222	ENST00000569820	MED7	O43513	233 aa		12.34	□□□□□ -0.43
SPG7-222	ENST00000569820	PSTPIP1	O43586	416 aa		12.34	□□□□□ -0.43
SPG7-222	ENST00000569820	AOC2	O75106	756 aa		12.34	□□□□□ -0.43
SPG7-222	ENST00000569820	ADAMTS4	O75173	837 aa		12.34	□□□□□ -0.43
SPG7-222	ENST00000569820	AKAP5	P24588	427 aa		12.34	□□□□□ -0.43
SPG7-222	ENST00000569820	GJC1	P36383	396 aa		12.34	□□□□□ -0.43
SPG7-222	ENST00000569820	AQP4	P55087	323 aa		12.34	□□□□□ -0.43
SPG7-222	ENST00000569820	ADAR	P55265	1226 aa	Known RBP	12.34	□□□□□ -0.43
SPG7-222	ENST00000569820	GPX6	P59796	221 aa		12.34	□□□□□ -0.43
SPG7-222	ENST00000569820	XIAP	P98170	497 aa		12.34	□□□□□ -0.43
SPG7-222	ENST00000569820	CACNB2	Q08289	660 aa	Predicted RBP	12.34	□□□□□ -0.43
SPG7-222	ENST00000569820	PDK3	Q15120	406 aa		12.34	□□□□□ -0.43
SPG7-222	ENST00000569820	PTPN20	Q4JDL3	420 aa		12.34	□□□□□ -0.43
SPG7-222	ENST00000569820	GRAMD4	Q6IC98	578 aa		12.34	□□□□□ -0.43
SPG7-222	ENST00000569820	KYAT3	Q6YP21	454 aa	Known RBP	12.34	□□□□□ -0.43
SPG7-222	ENST00000569820	RHOT1	Q8IXI2	618 aa		12.34	□□□□□ -0.43
SPG7-222	ENST00000569820	MZB1	Q8WU39	189 aa		12.34	□□□□□ -0.43
SPG7-222	ENST00000569820	ABTB1	Q969K4	478 aa	Predicted RBP	12.34	□□□□□ -0.43
SPG7-222	ENST00000569820	APOL6	Q9BWW8	343 aa		12.34	□□□□□ -0.43
SPG7-222	ENST00000569820	FAM124B	Q9H5Z6	455 aa	Predicted RBP	12.34	□□□□□ -0.43
SPG7-222	ENST00000569820	NRDE2	Q9H7Z3	1164 aa		12.34	□□□□□ -0.43
SPG7-222	ENST00000569820	SHOC2	Q9UQ13	582 aa		12.34	□□□□□ -0.43
SPG7-222	ENST00000569820	TMEM191C	A6NGB0	347 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	TXNDC9	O14530	226 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	LIAS	O43766	372 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	BANF1	O75531	89 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	PIAS1	O75925	651 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	IL1B	P01584	269 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	ALDH2	P05091	517 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	DHRS4L1	P0CG22	281 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	STIP1	P31948	543 aa	Known RBP	12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	NDST1	P52848	882 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	TAS2R40	P59535	323 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	PDE1B	Q01064	536 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	DLG1	Q12959	904 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	MSLN	Q13421	630 aa	Predicted RBP	12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	HIF1A	Q16665	826 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	KLHL38	Q2WGJ6	581 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	CYP4A22	Q5TCH4	519 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	LPCAT4	Q643R3	524 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	GDF6	Q6KF10	455 aa	Predicted RBP	12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	DNAJC24	Q6P3W2	148 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	RBM44	Q6ZP01	1051 aa	Known RBP	12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	PYDC1	Q8WXC3	89 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	WNT8B	Q93098	351 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	MCEE	Q96PE7	176 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	FAM111A	Q96PZ2	611 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	RNF39	Q9H2S5	420 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	RNF19A	Q9NV58	838 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	KCNK4	Q9NYG8	393 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	TJP2	Q9UDY2	1190 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	DNPEP	Q9ULA0	475 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	CCDC160	A6NGH7	325 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	EIF3F	O00303	357 aa	Predicted RBP	12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	VILL	O15195	856 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	MICAL2	O94851	1124 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	MT-ND3	P03897	115 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	ETS1	P14921	441 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	SSTR1	P30872	391 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	SERPINB8	P50452	374 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	MRPS6	P82932	125 aa	Known RBP	12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	OGDH	Q02218	1023 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	NOG	Q13253	232 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	CYLC2	Q14093	348 aa	Predicted RBP	12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	BCL2A1	Q16548	175 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	ANKRD20A4	Q4UJ75	823 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	XKR4	Q5GH76	650 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	RNASEH2B	Q5TBB1	312 aa	Known RBP	12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	GET4	Q7L5D6	327 aa	Predicted RBP	12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	PRPF39	Q86UA1	669 aa	Known RBP	12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	KATNAL2	Q8IYT4	538 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	LRRC52	Q8N7C0	313 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	LSM14A	Q8ND56	463 aa	Known RBP	12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	GSTCD	Q8NEC7	633 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	BEST2	Q8NFU1	509 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	PYROXD1	Q8WU10	500 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	GFM2	Q969S9	779 aa	Known RBP	12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	PRICKLE1	Q96MT3	831 aa	Predicted RBP	12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	SIKE1	Q9BRV8	207 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	DHRS4	Q9BTZ2	278 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	IP6K2	Q9UHH9	426 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	CLUH	O75153	1309 aa		12.33	□□□□□ -0.44
SPG7-222	ENST00000569820	C15orf38-AP3S2	A0A0A6YYH1	394 aa		12.32	□□□□□ -0.44
SPG7-222	ENST00000569820	GOLGA8S	H3BPF8	625 aa		12.32	□□□□□ -0.44
SPG7-222	ENST00000569820	GOLGA8M	H3BSY2	632 aa		12.32	□□□□□ -0.44
SPG7-222	ENST00000569820	NDC80	O14777	642 aa		12.32	□□□□□ -0.44
SPG7-222	ENST00000569820	CCND3	P30281	292 aa	Predicted RBP	12.32	□□□□□ -0.44
SPG7-222	ENST00000569820	CA8	P35219	290 aa		12.32	□□□□□ -0.44
SPG7-222	ENST00000569820	ETV4	P43268	484 aa		12.32	□□□□□ -0.44
SPG7-222	ENST00000569820	RPL5	P46777	297 aa	Known RBP	12.32	□□□□□ -0.44
SPG7-222	ENST00000569820	EFHC1	Q5JVL4	640 aa		12.32	□□□□□ -0.44
SPG7-222	ENST00000569820	C9orf57	Q5W0N0	161 aa		12.32	□□□□□ -0.44
SPG7-222	ENST00000569820	C1orf228	Q6PIY5	440 aa		12.32	□□□□□ -0.44
SPG7-222	ENST00000569820	UGT2A3	Q6UWM9	527 aa		12.32	□□□□□ -0.44
SPG7-222	ENST00000569820	C3orf62	Q6ZUJ4	267 aa		12.32	□□□□□ -0.44

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