RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 RING1Q06587 406 aa14.21□□□□□ -0.13
TPM1-215ENST00000558868 EFEMP1Q12805 493 aa14.21□□□□□ -0.13
TPM1-215ENST00000558868 PRKD1Q15139 912 aaPredicted RBP14.21□□□□□ -0.13
TPM1-215ENST00000558868 KCTD19Q17RG1 926 aaPredicted RBP14.21□□□□□ -0.13
TPM1-215ENST00000558868 TMEM240Q5SV17 173 aa14.21□□□□□ -0.13
TPM1-215ENST00000558868 CEP85LQ5SZL2 805 aa14.21□□□□□ -0.13
TPM1-215ENST00000558868 FAM72AQ5TYM5 149 aa14.21□□□□□ -0.13
TPM1-215ENST00000558868 SNX30Q5VWJ9 437 aa14.21□□□□□ -0.13
TPM1-215ENST00000558868 FAM72DQ6L9T8 149 aa14.21□□□□□ -0.13
TPM1-215ENST00000558868 PRUNE1Q86TP1 453 aa14.21□□□□□ -0.13
TPM1-215ENST00000558868 FAM72BQ86X60 149 aa14.21□□□□□ -0.13
TPM1-215ENST00000558868 TCEAL8Q8IYN2 117 aa14.21□□□□□ -0.13
TPM1-215ENST00000558868 HTR3CQ8WXA8 447 aa14.21□□□□□ -0.13
TPM1-215ENST00000558868 HERVK_113Q902F9 699 aa14.21□□□□□ -0.13
TPM1-215ENST00000558868 PRCCQ92733 491 aaPredicted RBP14.21□□□□□ -0.13
TPM1-215ENST00000558868 CLP1Q92989 425 aaKnown RBP14.21□□□□□ -0.13
TPM1-215ENST00000558868 TRMT2BQ96GJ1 504 aaKnown RBP14.21□□□□□ -0.13
TPM1-215ENST00000558868 HTATIP2Q9BUP3 242 aa14.21□□□□□ -0.13
TPM1-215ENST00000558868 C10orf88Q9H8K7 445 aa14.21□□□□□ -0.13
TPM1-215ENST00000558868 UXTQ9UBK9 157 aaPredicted RBP14.21□□□□□ -0.13
TPM1-215ENST00000558868 RWDD3Q9Y3V2 267 aa14.21□□□□□ -0.13
TPM1-215ENST00000558868 HBS1LQ9Y450 684 aaKnown RBP14.21□□□□□ -0.13
TPM1-215ENST00000558868 YIPF1Q9Y548 306 aa14.21□□□□□ -0.13
TPM1-215ENST00000558868 SLC4A7Q9Y6M7 1214 aa14.21□□□□□ -0.13
TPM1-215ENST00000558868 H0YGN5 161 aa14.2□□□□□ -0.14
TPM1-215ENST00000558868 I6L893 689 aaPredicted RBP14.2□□□□□ -0.14
TPM1-215ENST00000558868 MSI1O43347 362 aaKnown RBP14.2□□□□□ -0.14
TPM1-215ENST00000558868 RIPK2O43353 540 aa14.2□□□□□ -0.14
TPM1-215ENST00000558868 RNF40O75150 1001 aa14.2□□□□□ -0.14
TPM1-215ENST00000558868 TTC4O95801 387 aa14.2□□□□□ -0.14
TPM1-215ENST00000558868 CTSAP10619 480 aa14.2□□□□□ -0.14
TPM1-215ENST00000558868 HOXC13P31276 330 aa14.2□□□□□ -0.14
TPM1-215ENST00000558868 CHKAP35790 457 aa14.2□□□□□ -0.14
TPM1-215ENST00000558868 FDFT1P37268 417 aa14.2□□□□□ -0.14
TPM1-215ENST00000558868 PGFP49763 221 aa14.2□□□□□ -0.14
TPM1-215ENST00000558868 EPHB3P54753 998 aa14.2□□□□□ -0.14
TPM1-215ENST00000558868 MLLT6P55198 1093 aaPredicted RBP14.2□□□□□ -0.14
TPM1-215ENST00000558868 BASP1P80723 227 aaKnown RBP14.2□□□□□ -0.14
TPM1-215ENST00000558868 CBX1P83916 185 aa14.2□□□□□ -0.14
TPM1-215ENST00000558868 ZNF33AQ06730 810 aa14.2□□□□□ -0.14
TPM1-215ENST00000558868 RASIP1Q5U651 963 aa14.2□□□□□ -0.14
TPM1-215ENST00000558868 NUGGCQ68CJ6 796 aa14.2□□□□□ -0.14
TPM1-215ENST00000558868 RWDD4Q6NW29 188 aaKnown RBP14.2□□□□□ -0.14
TPM1-215ENST00000558868 KLHDC10Q6PID8 442 aa14.2□□□□□ -0.14
TPM1-215ENST00000558868 LRRC31Q6UY01 552 aa14.2□□□□□ -0.14
TPM1-215ENST00000558868 ARHGEF18Q6ZSZ5 1173 aa14.2□□□□□ -0.14
TPM1-215ENST00000558868 ITIH5Q86UX2 942 aa14.2□□□□□ -0.14
TPM1-215ENST00000558868 HERC6Q8IVU3 1022 aa14.2□□□□□ -0.14
TPM1-215ENST00000558868 C7orf61Q8IZ16 206 aa14.2□□□□□ -0.14
TPM1-215ENST00000558868 NAT8LQ8N9F0 302 aa14.2□□□□□ -0.14
TPM1-215ENST00000558868 CCNYQ8ND76 341 aa14.2□□□□□ -0.14
TPM1-215ENST00000558868 CPT1BQ92523 772 aa14.2□□□□□ -0.14
TPM1-215ENST00000558868 BTN2A3PQ96KV6 586 aa14.2□□□□□ -0.14
TPM1-215ENST00000558868 FCRL2Q96LA5 508 aaPredicted RBP14.2□□□□□ -0.14
TPM1-215ENST00000558868 MYRFLQ96LU7 910 aa14.2□□□□□ -0.14
TPM1-215ENST00000558868 ZNF512Q96ME7 567 aaPredicted RBP14.2□□□□□ -0.14
TPM1-215ENST00000558868 RBM15Q96T37 977 aaKnown RBP eCLIP14.2□□□□□ -0.14
TPM1-215ENST00000558868 CCDC77Q9BR77 488 aa14.2□□□□□ -0.14
TPM1-215ENST00000558868 TMEM109Q9BVC6 243 aa14.2□□□□□ -0.14
TPM1-215ENST00000558868 SIK2Q9H0K1 926 aa14.2□□□□□ -0.14
TPM1-215ENST00000558868 ZBP1Q9H171 429 aa14.2□□□□□ -0.14
TPM1-215ENST00000558868 CDC42EP4Q9H3Q1 356 aaKnown RBP14.2□□□□□ -0.14
TPM1-215ENST00000558868 SEMA4AQ9H3S1 761 aa14.2□□□□□ -0.14
TPM1-215ENST00000558868 TRPM5Q9NZQ8 1165 aa14.2□□□□□ -0.14
TPM1-215ENST00000558868 RAPGEFL1Q9UHV5 662 aa14.2□□□□□ -0.14
TPM1-215ENST00000558868 DNMT3LQ9UJW3 386 aa14.2□□□□□ -0.14
TPM1-215ENST00000558868 MAGED2Q9UNF1 606 aaPredicted RBP14.2□□□□□ -0.14
TPM1-215ENST00000558868 NFS1Q9Y697 457 aa14.2□□□□□ -0.14
TPM1-215ENST00000558868 SPTBN5Q9NRC6 3674 aaKnown RBP14.2□□□□□ -0.14
TPM1-215ENST00000558868 CLUHO75153 1309 aa14.19□□□□□ -0.14
TPM1-215ENST00000558868 A0A0A0MRY4 1105 aa14.19□□□□□ -0.14
TPM1-215ENST00000558868 SLC12A8A0AV02 714 aa14.19□□□□□ -0.14
TPM1-215ENST00000558868 TLR5O60602 858 aa14.19□□□□□ -0.14
TPM1-215ENST00000558868 OPHN1O60890 802 aa14.19□□□□□ -0.14
TPM1-215ENST00000558868 SEC24AO95486 1093 aa14.19□□□□□ -0.14
TPM1-215ENST00000558868 SRGAP2BP0DMP2 458 aa14.19□□□□□ -0.14
TPM1-215ENST00000558868 ATP5C1P36542 298 aaKnown RBP14.19□□□□□ -0.14
TPM1-215ENST00000558868 MAGEA4P43358 317 aa14.19□□□□□ -0.14
TPM1-215ENST00000558868 MAGEA6P43360 314 aa14.19□□□□□ -0.14
TPM1-215ENST00000558868 TUBP50607 506 aa14.19□□□□□ -0.14
TPM1-215ENST00000558868 SARNPP82979 210 aaKnown RBP14.19□□□□□ -0.14
TPM1-215ENST00000558868 AP1B1Q10567 949 aa14.19□□□□□ -0.14
TPM1-215ENST00000558868 SLC29A2Q14542 456 aa14.19□□□□□ -0.14
TPM1-215ENST00000558868 HIF1AQ16665 826 aa14.19□□□□□ -0.14
TPM1-215ENST00000558868 HECTD3Q5T447 861 aa14.19□□□□□ -0.14
TPM1-215ENST00000558868 MANEALQ5VSG8 457 aa14.19□□□□□ -0.14
TPM1-215ENST00000558868 LRRC49Q8IUZ0 686 aa14.19□□□□□ -0.14
TPM1-215ENST00000558868 PDIK1LQ8N165 341 aa14.19□□□□□ -0.14
TPM1-215ENST00000558868 SP7Q8TDD2 431 aaPredicted RBP14.19□□□□□ -0.14
TPM1-215ENST00000558868 EXOC4Q96A65 974 aa14.19□□□□□ -0.14
TPM1-215ENST00000558868 SPATA13Q96N96 652 aa14.19□□□□□ -0.14
TPM1-215ENST00000558868 LBHD1Q9BQE6 289 aaPredicted RBP14.19□□□□□ -0.14
TPM1-215ENST00000558868 ROPN1BQ9BZX4 212 aaPredicted RBP14.19□□□□□ -0.14
TPM1-215ENST00000558868 NACA2Q9H009 215 aa14.19□□□□□ -0.14
TPM1-215ENST00000558868 PRDM12Q9H4Q4 367 aa14.19□□□□□ -0.14
TPM1-215ENST00000558868 ROPN1Q9HAT0 212 aaPredicted RBP14.19□□□□□ -0.14
TPM1-215ENST00000558868 SAYSD1Q9NPB0 183 aa14.19□□□□□ -0.14
TPM1-215ENST00000558868 RAB6BQ9NRW1 208 aa14.19□□□□□ -0.14
TPM1-215ENST00000558868 XPO7Q9UIA9 1087 aaKnown RBP14.19□□□□□ -0.14
TPM1-215ENST00000558868 NUDT5Q9UKK9 219 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms