RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 CHURC1-FNTBB4DL54 471 aa16.4■□□□□ 0.22
RABGGTA-206ENST00000558649 MFAP3LO75121 409 aa16.4■□□□□ 0.22
RABGGTA-206ENST00000558649 GZMAP12544 262 aa16.4■□□□□ 0.22
RABGGTA-206ENST00000558649 KIR2DL1P43626 348 aaPredicted RBP16.4■□□□□ 0.22
RABGGTA-206ENST00000558649 PXNP49023 591 aaPredicted RBP16.4■□□□□ 0.22
RABGGTA-206ENST00000558649 RPL7AP62424 266 aaKnown RBP16.4■□□□□ 0.22
RABGGTA-206ENST00000558649 MRPS21P82921 87 aaKnown RBP16.4■□□□□ 0.22
RABGGTA-206ENST00000558649 DMWDQ09019 674 aa16.4■□□□□ 0.22
RABGGTA-206ENST00000558649 CDH18Q13634 790 aa16.4■□□□□ 0.22
RABGGTA-206ENST00000558649 DMC1Q14565 340 aa16.4■□□□□ 0.22
RABGGTA-206ENST00000558649 TSR1Q2NL82 804 aaKnown RBP16.4■□□□□ 0.22
RABGGTA-206ENST00000558649 BRMS1LQ5PSV4 323 aa16.4■□□□□ 0.22
RABGGTA-206ENST00000558649 EGFLAMQ63HQ2 1017 aa16.4■□□□□ 0.22
RABGGTA-206ENST00000558649 CCDC117Q8IWD4 279 aaPredicted RBP16.4■□□□□ 0.22
RABGGTA-206ENST00000558649 IL17RCQ8NAC3 791 aa16.4■□□□□ 0.22
RABGGTA-206ENST00000558649 FAM172AQ8WUF8 416 aa16.4■□□□□ 0.22
RABGGTA-206ENST00000558649 RPRD1AQ96P16 312 aaPredicted RBP16.4■□□□□ 0.22
RABGGTA-206ENST00000558649 SLC2A11Q9BYW1 496 aa16.4■□□□□ 0.22
RABGGTA-206ENST00000558649 CIPCQ9C0C6 399 aa16.4■□□□□ 0.22
RABGGTA-206ENST00000558649 ANLNQ9NQW6 1124 aa16.4■□□□□ 0.22
RABGGTA-206ENST00000558649 ABHD10Q9NUJ1 306 aa16.4■□□□□ 0.22
RABGGTA-206ENST00000558649 ZNHIT6Q9NWK9 470 aaKnown RBP16.4■□□□□ 0.22
RABGGTA-206ENST00000558649 ARHGEF38Q9NXL2 777 aa16.4■□□□□ 0.22
RABGGTA-206ENST00000558649 ARHGAP20Q9P2F6 1191 aa16.4■□□□□ 0.22
RABGGTA-206ENST00000558649 CNOT8Q9UFF9 292 aaKnown RBP16.4■□□□□ 0.22
RABGGTA-206ENST00000558649 GGA2Q9UJY4 613 aa16.4■□□□□ 0.22
RABGGTA-206ENST00000558649 FBXO10Q9UK96 956 aa16.4■□□□□ 0.22
RABGGTA-206ENST00000558649 VANGL2Q9ULK5 521 aa16.4■□□□□ 0.22
RABGGTA-206ENST00000558649 SLC27A6Q9Y2P4 619 aa16.4■□□□□ 0.22
RABGGTA-206ENST00000558649 HS3ST4Q9Y661 456 aa16.4■□□□□ 0.22
RABGGTA-206ENST00000558649 A0A087X0T9 212 aa16.39■□□□□ 0.21
RABGGTA-206ENST00000558649 TCRBV5S1A1TA0A578 114 aa16.39■□□□□ 0.21
RABGGTA-206ENST00000558649 H0Y626 953 aa16.39■□□□□ 0.21
RABGGTA-206ENST00000558649 SGK1O00141 431 aa16.39■□□□□ 0.21
RABGGTA-206ENST00000558649 FAM228BP0C875 321 aa16.39■□□□□ 0.21
RABGGTA-206ENST00000558649 HLA-FP30511 346 aa16.39■□□□□ 0.21
RABGGTA-206ENST00000558649 EIF4A3P38919 411 aaKnown RBP16.39■□□□□ 0.21
RABGGTA-206ENST00000558649 PTPN9P43378 593 aa16.39■□□□□ 0.21
RABGGTA-206ENST00000558649 NUMBP49757 651 aa16.39■□□□□ 0.21
RABGGTA-206ENST00000558649 AUHQ13825 339 aaKnown RBP16.39■□□□□ 0.21
RABGGTA-206ENST00000558649 RABGAP1LQ5R372 815 aa16.39■□□□□ 0.21
RABGGTA-206ENST00000558649 FBXL22Q6P050 247 aa16.39■□□□□ 0.21
RABGGTA-206ENST00000558649 MAMSTRQ6ZN01 415 aa16.39■□□□□ 0.21
RABGGTA-206ENST00000558649 SYT13Q7L8C5 426 aa16.39■□□□□ 0.21
RABGGTA-206ENST00000558649 OR8K1Q8NGG5 319 aa16.39■□□□□ 0.21
RABGGTA-206ENST00000558649 VCPIP1Q96JH7 1222 aa16.39■□□□□ 0.21
RABGGTA-206ENST00000558649 ACOX2Q99424 681 aa16.39■□□□□ 0.21
RABGGTA-206ENST00000558649 PHOX2BQ99453 314 aa16.39■□□□□ 0.21
RABGGTA-206ENST00000558649 DNAJC7Q99615 494 aa16.39■□□□□ 0.21
RABGGTA-206ENST00000558649 PRMT1Q99873 361 aaKnown RBP16.39■□□□□ 0.21
RABGGTA-206ENST00000558649 PARVAQ9NVD7 372 aa16.39■□□□□ 0.21
RABGGTA-206ENST00000558649 MMP17Q9ULZ9 603 aa16.39■□□□□ 0.21
RABGGTA-206ENST00000558649 ARIH1Q9Y4X5 557 aaPredicted RBP16.39■□□□□ 0.21
RABGGTA-206ENST00000558649 CACNA1IQ9P0X4 2223 aa16.39■□□□□ 0.21
RABGGTA-206ENST00000558649 I6L893 689 aaPredicted RBP16.38■□□□□ 0.21
RABGGTA-206ENST00000558649 K7ESF4 209 aa16.38■□□□□ 0.21
RABGGTA-206ENST00000558649 CCP110O43303 1012 aa16.38■□□□□ 0.21
RABGGTA-206ENST00000558649 LUC7L3O95232 432 aaKnown RBP16.38■□□□□ 0.21
RABGGTA-206ENST00000558649 TDGF1P13385 188 aa16.38■□□□□ 0.21
RABGGTA-206ENST00000558649 CD70P32970 193 aa16.38■□□□□ 0.21
RABGGTA-206ENST00000558649 FNTBP49356 437 aa16.38■□□□□ 0.21
RABGGTA-206ENST00000558649 IRAK1P51617 712 aa16.38■□□□□ 0.21
RABGGTA-206ENST00000558649 ZNF75DP51815 510 aa16.38■□□□□ 0.21
RABGGTA-206ENST00000558649 MTA1Q13330 715 aa16.38■□□□□ 0.21
RABGGTA-206ENST00000558649 MAMLD1Q13495 774 aa16.38■□□□□ 0.21
RABGGTA-206ENST00000558649 ZNF528Q3MIS6 628 aa16.38■□□□□ 0.21
RABGGTA-206ENST00000558649 EOGTQ5NDL2 527 aa16.38■□□□□ 0.21
RABGGTA-206ENST00000558649 PPP1R15BQ5SWA1 713 aa16.38■□□□□ 0.21
RABGGTA-206ENST00000558649 MPP7Q5T2T1 576 aa16.38■□□□□ 0.21
RABGGTA-206ENST00000558649 CHST9Q7L1S5 443 aa16.38■□□□□ 0.21
RABGGTA-206ENST00000558649 TRMT11Q7Z4G4 463 aaKnown RBP16.38■□□□□ 0.21
RABGGTA-206ENST00000558649 C14orf80Q86SX3 495 aa16.38■□□□□ 0.21
RABGGTA-206ENST00000558649 CHPFQ8IZ52 775 aa16.38■□□□□ 0.21
RABGGTA-206ENST00000558649 SORCS1Q8WY21 1168 aa16.38■□□□□ 0.21
RABGGTA-206ENST00000558649 IGSF8Q969P0 613 aa16.38■□□□□ 0.21
RABGGTA-206ENST00000558649 TRIM11Q96F44 468 aa16.38■□□□□ 0.21
RABGGTA-206ENST00000558649 IRX2Q9BZI1 471 aaPredicted RBP16.38■□□□□ 0.21
RABGGTA-206ENST00000558649 DEF6Q9H4E7 631 aa16.38■□□□□ 0.21
RABGGTA-206ENST00000558649 CACNA2D2Q9NY47 1150 aa16.38■□□□□ 0.21
RABGGTA-206ENST00000558649 HCN2Q9UL51 889 aa16.38■□□□□ 0.21
RABGGTA-206ENST00000558649 AKR1B15C9JRZ8 316 aaPredicted RBP16.37■□□□□ 0.21
RABGGTA-206ENST00000558649 SRGAP2O75044 1071 aa16.37■□□□□ 0.21
RABGGTA-206ENST00000558649 ADAM23O75077 832 aa16.37■□□□□ 0.21
RABGGTA-206ENST00000558649 ENDOD1O94919 500 aa16.37■□□□□ 0.21
RABGGTA-206ENST00000558649 PAPSS2O95340 614 aaPredicted RBP16.37■□□□□ 0.21
RABGGTA-206ENST00000558649 CHRM1P11229 460 aaPredicted RBP16.37■□□□□ 0.21
RABGGTA-206ENST00000558649 PABPC1P11940 636 aaKnown RBP16.37■□□□□ 0.21
RABGGTA-206ENST00000558649 DESP17661 470 aa16.37■□□□□ 0.21
RABGGTA-206ENST00000558649 HNRNPH3P31942 346 aaKnown RBP16.37■□□□□ 0.21
RABGGTA-206ENST00000558649 ZNF143P52747 638 aaPredicted RBP16.37■□□□□ 0.21
RABGGTA-206ENST00000558649 NRLP54845 237 aa16.37■□□□□ 0.21
RABGGTA-206ENST00000558649 OGDHQ02218 1023 aa16.37■□□□□ 0.21
RABGGTA-206ENST00000558649 GFPT1Q06210 699 aaPredicted RBP16.37■□□□□ 0.21
RABGGTA-206ENST00000558649 LMAN2Q12907 356 aa16.37■□□□□ 0.21
RABGGTA-206ENST00000558649 ARL13BQ3SXY8 428 aa16.37■□□□□ 0.21
RABGGTA-206ENST00000558649 CCDC122Q5T0U0 273 aa16.37■□□□□ 0.21
RABGGTA-206ENST00000558649 TMEM215Q68D42 235 aa16.37■□□□□ 0.21
RABGGTA-206ENST00000558649 PLEKHA7Q6IQ23 1121 aa16.37■□□□□ 0.21
RABGGTA-206ENST00000558649 SDE2Q6IQ49 451 aa16.37■□□□□ 0.21
RABGGTA-206ENST00000558649 SCYL2Q6P3W7 929 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms