RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 FOXN1O15353 648 aa5.76□□□□□ -1.49
SYNE2-210ENST00000553455 HNRNPCP07910 306 aaKnown RBP eCLIP5.76□□□□□ -1.49
SYNE2-210ENST00000553455 LYL1P12980 280 aa5.76□□□□□ -1.49
SYNE2-210ENST00000553455 CPA1P15085 419 aa5.76□□□□□ -1.49
SYNE2-210ENST00000553455 TACR2P21452 398 aa5.76□□□□□ -1.49
SYNE2-210ENST00000553455 PROZP22891 400 aa5.76□□□□□ -1.49
SYNE2-210ENST00000553455 PCP4P48539 62 aa5.76□□□□□ -1.49
SYNE2-210ENST00000553455 SLC37A1P57057 533 aa5.76□□□□□ -1.49
SYNE2-210ENST00000553455 GEMIN4P57678 1058 aaKnown RBP5.76□□□□□ -1.49
SYNE2-210ENST00000553455 CDK18Q07002 472 aa5.76□□□□□ -1.49
SYNE2-210ENST00000553455 THOC5Q13769 683 aaKnown RBP5.76□□□□□ -1.49
SYNE2-210ENST00000553455 LARS2Q15031 903 aaKnown RBP5.76□□□□□ -1.49
SYNE2-210ENST00000553455 WDR45BQ5MNZ6 344 aa5.76□□□□□ -1.49
SYNE2-210ENST00000553455 CBWD5Q5RIA9 395 aa5.76□□□□□ -1.49
SYNE2-210ENST00000553455 SLC9C2Q5TAH2 1124 aa5.76□□□□□ -1.49
SYNE2-210ENST00000553455 CEP85Q6P2H3 762 aa5.76□□□□□ -1.49
SYNE2-210ENST00000553455 SLC39A5Q6ZMH5 540 aa5.76□□□□□ -1.49
SYNE2-210ENST00000553455 TRIM72Q6ZMU5 477 aa5.76□□□□□ -1.49
SYNE2-210ENST00000553455 DCDC5Q6ZRR9 648 aa5.76□□□□□ -1.49
SYNE2-210ENST00000553455 LDLRAD3Q86YD5 345 aa5.76□□□□□ -1.49
SYNE2-210ENST00000553455 ADGRF3Q8IZF5 1079 aa5.76□□□□□ -1.49
SYNE2-210ENST00000553455 PCYOX1LQ8NBM8 494 aa5.76□□□□□ -1.49
SYNE2-210ENST00000553455 SKA1Q96BD8 255 aa5.76□□□□□ -1.49
SYNE2-210ENST00000553455 DAZAP1Q96EP5 407 aaKnown RBP5.76□□□□□ -1.49
SYNE2-210ENST00000553455 RRP36Q96EU6 259 aaKnown RBP5.76□□□□□ -1.49
SYNE2-210ENST00000553455 TIMP4Q99727 224 aa5.76□□□□□ -1.49
SYNE2-210ENST00000553455 PRRX2Q99811 253 aa5.76□□□□□ -1.49
SYNE2-210ENST00000553455 PHF7Q9BWX1 381 aaPredicted RBP5.76□□□□□ -1.49
SYNE2-210ENST00000553455 UNC45AQ9H3U1 944 aa5.76□□□□□ -1.49
SYNE2-210ENST00000553455 TLR8Q9NR97 1041 aaKnown RBP5.76□□□□□ -1.49
SYNE2-210ENST00000553455 IL17RBQ9NRM6 502 aa5.76□□□□□ -1.49
SYNE2-210ENST00000553455 MTMR4Q9NYA4 1195 aa5.76□□□□□ -1.49
SYNE2-210ENST00000553455 SERGEFQ9UGK8 458 aa5.76□□□□□ -1.49
SYNE2-210ENST00000553455 PACSIN3Q9UKS6 424 aa5.76□□□□□ -1.49
SYNE2-210ENST00000553455 HSF4Q9ULV5 492 aa5.76□□□□□ -1.49
SYNE2-210ENST00000553455 NCANO14594 1321 aa5.75□□□□□ -1.49
SYNE2-210ENST00000553455 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.75□□□□□ -1.49
SYNE2-210ENST00000553455 TMEM191CA6NGB0 347 aa5.75□□□□□ -1.49
SYNE2-210ENST00000553455 MBD4O95243 580 aa5.75□□□□□ -1.49
SYNE2-210ENST00000553455 CYP2D6P10635 497 aa5.75□□□□□ -1.49
SYNE2-210ENST00000553455 WT1P19544 449 aaPredicted RBP5.75□□□□□ -1.49
SYNE2-210ENST00000553455 HOXD12P35452 270 aa5.75□□□□□ -1.49
SYNE2-210ENST00000553455 ZNF84P51523 738 aa5.75□□□□□ -1.49
SYNE2-210ENST00000553455 CACNA2D1P54289 1103 aa5.75□□□□□ -1.49
SYNE2-210ENST00000553455 B4GALNT1Q00973 533 aa5.75□□□□□ -1.49
SYNE2-210ENST00000553455 PUM1Q14671 1186 aaKnown RBP eCLIP5.75□□□□□ -1.49
SYNE2-210ENST00000553455 KCNB1Q14721 858 aa5.75□□□□□ -1.49
SYNE2-210ENST00000553455 CNGA3Q16281 694 aa5.75□□□□□ -1.49
SYNE2-210ENST00000553455 FAM153CQ494X1 144 aa5.75□□□□□ -1.49
SYNE2-210ENST00000553455 MAATS1Q7Z4T9 603 aa5.75□□□□□ -1.49
SYNE2-210ENST00000553455 GALNT4Q8N4A0 578 aa5.75□□□□□ -1.49
SYNE2-210ENST00000553455 EXD3Q8N9H8 876 aa5.75□□□□□ -1.49
SYNE2-210ENST00000553455 ST8SIA4Q92187 359 aa5.75□□□□□ -1.49
SYNE2-210ENST00000553455 HIC2Q96JB3 615 aa5.75□□□□□ -1.49
SYNE2-210ENST00000553455 HS6ST2Q96MM7 605 aa5.75□□□□□ -1.49
SYNE2-210ENST00000553455 UROC1Q96N76 676 aa5.75□□□□□ -1.49
SYNE2-210ENST00000553455 GPR78Q96P69 363 aa5.75□□□□□ -1.49
SYNE2-210ENST00000553455 PPP1R10Q96QC0 940 aaKnown RBP5.75□□□□□ -1.49
SYNE2-210ENST00000553455 HTATIP2Q9BUP3 242 aa5.75□□□□□ -1.49
SYNE2-210ENST00000553455 IL21RQ9HBE5 538 aa5.75□□□□□ -1.49
SYNE2-210ENST00000553455 TFCP2L1Q9NZI6 479 aa5.75□□□□□ -1.49
SYNE2-210ENST00000553455 LMTK3Q96Q04 1460 aa5.75□□□□□ -1.49
SYNE2-210ENST00000553455 KAT6AQ92794 2004 aa5.74□□□□□ -1.49
SYNE2-210ENST00000553455 CCDC196A0A1B0GTZ2 297 aa5.74□□□□□ -1.49
SYNE2-210ENST00000553455 NPIPB13A6NJU9 1138 aa5.74□□□□□ -1.49
SYNE2-210ENST00000553455 NPIPB5A8MRT5 1133 aa5.74□□□□□ -1.49
SYNE2-210ENST00000553455 NPIPB4C9JG80 1138 aa5.74□□□□□ -1.49
SYNE2-210ENST00000553455 PRRG2O14669 202 aa5.74□□□□□ -1.49
SYNE2-210ENST00000553455 DHX16O60231 1041 aaKnown RBP5.74□□□□□ -1.49
SYNE2-210ENST00000553455 GCP02774 474 aa5.74□□□□□ -1.49
SYNE2-210ENST00000553455 C6P13671 934 aa5.74□□□□□ -1.49
SYNE2-210ENST00000553455 PRPH2P23942 346 aa5.74□□□□□ -1.49
SYNE2-210ENST00000553455 ELF1P32519 619 aa5.74□□□□□ -1.49
SYNE2-210ENST00000553455 BUD31P41223 144 aaPredicted RBP5.74□□□□□ -1.49
SYNE2-210ENST00000553455 SHC2P98077 582 aa5.74□□□□□ -1.49
SYNE2-210ENST00000553455 HOXA4Q00056 320 aaPredicted RBP5.74□□□□□ -1.49
SYNE2-210ENST00000553455 DMWDQ09019 674 aa5.74□□□□□ -1.49
SYNE2-210ENST00000553455 LMOD3Q0VAK6 560 aa5.74□□□□□ -1.49
SYNE2-210ENST00000553455 SLC14A1Q13336 389 aa5.74□□□□□ -1.49
SYNE2-210ENST00000553455 ERCC6LQ2NKX8 1250 aa5.74□□□□□ -1.49
SYNE2-210ENST00000553455 AWAT1Q58HT5 328 aa5.74□□□□□ -1.49
SYNE2-210ENST00000553455 DENND1BQ6P3S1 775 aa5.74□□□□□ -1.49
SYNE2-210ENST00000553455 TMEM88Q6PEY1 159 aa5.74□□□□□ -1.49
SYNE2-210ENST00000553455 TMEM65Q6PI78 240 aa5.74□□□□□ -1.49
SYNE2-210ENST00000553455 PCSK4Q6UW60 755 aa5.74□□□□□ -1.49
SYNE2-210ENST00000553455 ANKRD44Q8N8A2 993 aa5.74□□□□□ -1.49
SYNE2-210ENST00000553455 SRFBP1Q8NEF9 429 aaKnown RBP5.74□□□□□ -1.49
SYNE2-210ENST00000553455 STAMQ92783 540 aa5.74□□□□□ -1.49
SYNE2-210ENST00000553455 MASTLQ96GX5 879 aa5.74□□□□□ -1.49
SYNE2-210ENST00000553455 ZNF845Q96IR2 970 aaPredicted RBP5.74□□□□□ -1.49
SYNE2-210ENST00000553455 GATA5Q9BWX5 397 aaPredicted RBP5.74□□□□□ -1.49
SYNE2-210ENST00000553455 STN1Q9H668 368 aaKnown RBP5.74□□□□□ -1.49
SYNE2-210ENST00000553455 ASNSD1Q9NWL6 643 aa5.74□□□□□ -1.49
SYNE2-210ENST00000553455 SLC17A6Q9P2U8 582 aa5.74□□□□□ -1.49
SYNE2-210ENST00000553455 TBX20Q9UMR3 447 aa5.74□□□□□ -1.49
SYNE2-210ENST00000553455 GDAQ9Y2T3 454 aa5.74□□□□□ -1.49
SYNE2-210ENST00000553455 SIRT4Q9Y6E7 314 aaPredicted RBP5.74□□□□□ -1.49
SYNE2-210ENST00000553455 POLR2AP24928 1970 aaKnown RBP5.73□□□□□ -1.49
SYNE2-210ENST00000553455 TTC34A8MYJ7 566 aa5.73□□□□□ -1.49
SYNE2-210ENST00000553455 B4E171 279 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms