RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 CLN3Q13286 438 aa18.26■□□□□ 0.51
PVT1-220ENST00000524165 MPPE1Q53F39 396 aa18.26■□□□□ 0.51
PVT1-220ENST00000524165 C3orf38Q5JPI3 329 aa18.26■□□□□ 0.51
PVT1-220ENST00000524165 NAPEPLDQ6IQ20 393 aa18.26■□□□□ 0.51
PVT1-220ENST00000524165 DENND1CQ8IV53 801 aa18.26■□□□□ 0.51
PVT1-220ENST00000524165 AHI1Q8N157 1196 aa18.26■□□□□ 0.51
PVT1-220ENST00000524165 SLC25A45Q8N413 288 aa18.26■□□□□ 0.51
PVT1-220ENST00000524165 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.26■□□□□ 0.51
PVT1-220ENST00000524165 SLC2A14Q8TDB8 520 aa18.26■□□□□ 0.51
PVT1-220ENST00000524165 SYAP1Q96A49 352 aaPredicted RBP18.26■□□□□ 0.51
PVT1-220ENST00000524165 CLIC5Q9NZA1 410 aa18.26■□□□□ 0.51
PVT1-220ENST00000524165 NAGPAQ9UK23 515 aa18.26■□□□□ 0.51
PVT1-220ENST00000524165 LIMCH1Q9UPQ0 1083 aa18.26■□□□□ 0.51
PVT1-220ENST00000524165 NBASA2RRP1 2371 aa18.26■□□□□ 0.51
PVT1-220ENST00000524165 KIF26BQ2KJY2 2108 aa18.26■□□□□ 0.51
PVT1-220ENST00000524165 DOCK9Q9BZ29 2069 aa18.26■□□□□ 0.51
PVT1-220ENST00000524165 A0A1W2PP55 124 aa18.25■□□□□ 0.51
PVT1-220ENST00000524165 CLEC18AA5D8T8 446 aa18.25■□□□□ 0.51
PVT1-220ENST00000524165 HHLA1C9JL84 531 aa18.25■□□□□ 0.51
PVT1-220ENST00000524165 LATO43561 262 aa18.25■□□□□ 0.51
PVT1-220ENST00000524165 SDC3O75056 442 aa18.25■□□□□ 0.51
PVT1-220ENST00000524165 DLATP10515 647 aaKnown RBP18.25■□□□□ 0.51
PVT1-220ENST00000524165 RALAP11233 206 aa18.25■□□□□ 0.51
PVT1-220ENST00000524165 CCDC130P13994 396 aa18.25■□□□□ 0.51
PVT1-220ENST00000524165 LONP1P36776 959 aaKnown RBP18.25■□□□□ 0.51
PVT1-220ENST00000524165 MYL6P60660 151 aa18.25■□□□□ 0.51
PVT1-220ENST00000524165 TLE1Q04724 770 aa18.25■□□□□ 0.51
PVT1-220ENST00000524165 TRPC3Q13507 836 aa18.25■□□□□ 0.51
PVT1-220ENST00000524165 ISXQ2M1V0 245 aa18.25■□□□□ 0.51
PVT1-220ENST00000524165 ZSCAN23Q3MJ62 389 aa18.25■□□□□ 0.51
PVT1-220ENST00000524165 CLEC18BQ6UXF7 455 aa18.25■□□□□ 0.51
PVT1-220ENST00000524165 ACOT1Q86TX2 421 aa18.25■□□□□ 0.51
PVT1-220ENST00000524165 CLEC18CQ8NCF0 446 aa18.25■□□□□ 0.51
PVT1-220ENST00000524165 HPS3Q969F9 1004 aa18.25■□□□□ 0.51
PVT1-220ENST00000524165 DNAJC19Q96DA6 116 aa18.25■□□□□ 0.51
PVT1-220ENST00000524165 CGRRF1Q99675 332 aa18.25■□□□□ 0.51
PVT1-220ENST00000524165 SMYD3Q9H7B4 428 aa18.25■□□□□ 0.51
PVT1-220ENST00000524165 VRTNQ9H8Y1 702 aa18.25■□□□□ 0.51
PVT1-220ENST00000524165 PNPLA8Q9NP80 782 aa18.25■□□□□ 0.51
PVT1-220ENST00000524165 RASAL2Q9UJF2 1139 aa18.25■□□□□ 0.51
PVT1-220ENST00000524165 NYNRINQ9P2P1 1898 aaKnown RBP18.24■□□□□ 0.51
PVT1-220ENST00000524165 A0A1W2PNU3 283 aaPredicted RBP18.24■□□□□ 0.51
PVT1-220ENST00000524165 MID1O15344 667 aa18.24■□□□□ 0.51
PVT1-220ENST00000524165 RNASEH2AO75792 299 aaKnown RBP18.24■□□□□ 0.51
PVT1-220ENST00000524165 HMBSP08397 361 aa18.24■□□□□ 0.51
PVT1-220ENST00000524165 MLLT3P42568 568 aaPredicted RBP18.24■□□□□ 0.51
PVT1-220ENST00000524165 CST6Q15828 149 aa18.24■□□□□ 0.51
PVT1-220ENST00000524165 BMT2Q1RMZ1 405 aa18.24■□□□□ 0.51
PVT1-220ENST00000524165 MBLAC2Q68D91 279 aa18.24■□□□□ 0.51
PVT1-220ENST00000524165 CCDC186Q7Z3E2 898 aa18.24■□□□□ 0.51
PVT1-220ENST00000524165 SCD5Q86SK9 330 aa18.24■□□□□ 0.51
PVT1-220ENST00000524165 ZC3H3Q8IXZ2 948 aaKnown RBP18.24■□□□□ 0.51
PVT1-220ENST00000524165 PRR11Q96HE9 360 aaPredicted RBP18.24■□□□□ 0.51
PVT1-220ENST00000524165 OMDQ99983 421 aa18.24■□□□□ 0.51
PVT1-220ENST00000524165 ABCG4Q9H172 646 aa18.24■□□□□ 0.51
PVT1-220ENST00000524165 ABCB8Q9NUT2 735 aa18.24■□□□□ 0.51
PVT1-220ENST00000524165 GGA2Q9UJY4 613 aa18.24■□□□□ 0.51
PVT1-220ENST00000524165 ATXN7L1Q9ULK2 861 aaPredicted RBP18.24■□□□□ 0.51
PVT1-220ENST00000524165 EFSO43281 561 aa18.23■□□□□ 0.51
PVT1-220ENST00000524165 FAM200BP0CF97 657 aa18.23■□□□□ 0.51
PVT1-220ENST00000524165 PABPC1P11940 636 aaKnown RBP18.23■□□□□ 0.51
PVT1-220ENST00000524165 HARS2P49590 506 aaKnown RBP18.23■□□□□ 0.51
PVT1-220ENST00000524165 ZNF445P59923 1031 aa18.23■□□□□ 0.51
PVT1-220ENST00000524165 CLEC20AQ6ZU45 233 aa18.23■□□□□ 0.51
PVT1-220ENST00000524165 TMC6Q7Z403 805 aa18.23■□□□□ 0.51
PVT1-220ENST00000524165 CLEC14AQ86T13 490 aa18.23■□□□□ 0.51
PVT1-220ENST00000524165 CRYBG2Q8N1P7 616 aa18.23■□□□□ 0.51
PVT1-220ENST00000524165 EXTL1Q92935 676 aa18.23■□□□□ 0.51
PVT1-220ENST00000524165 USP29Q9HBJ7 922 aa18.23■□□□□ 0.51
PVT1-220ENST00000524165 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.23■□□□□ 0.51
PVT1-220ENST00000524165 HSPBP1Q9NZL4 362 aa18.23■□□□□ 0.51
PVT1-220ENST00000524165 POLR2EP19388 210 aaKnown RBP18.22■□□□□ 0.51
PVT1-220ENST00000524165 DGKAP23743 735 aa18.22■□□□□ 0.51
PVT1-220ENST00000524165 NUDT1P36639 197 aa18.22■□□□□ 0.51
PVT1-220ENST00000524165 DUSP3P51452 185 aaPredicted RBP18.22■□□□□ 0.51
PVT1-220ENST00000524165 KIF11P52732 1056 aa18.22■□□□□ 0.51
PVT1-220ENST00000524165 ADPRHP54922 357 aa18.22■□□□□ 0.51
PVT1-220ENST00000524165 EFEMP1Q12805 493 aa18.22■□□□□ 0.51
PVT1-220ENST00000524165 PSMD6Q15008 389 aa18.22■□□□□ 0.51
PVT1-220ENST00000524165 USP53Q70EK8 1073 aa18.22■□□□□ 0.51
PVT1-220ENST00000524165 SND1Q7KZF4 910 aaKnown RBP eCLIP18.22■□□□□ 0.51
PVT1-220ENST00000524165 ARL14Q8N4G2 192 aa18.22■□□□□ 0.51
PVT1-220ENST00000524165 SGF29Q96ES7 293 aa18.22■□□□□ 0.51
PVT1-220ENST00000524165 PSMG3-AS1Q96PY0 264 aa18.22■□□□□ 0.51
PVT1-220ENST00000524165 FGFBP2Q9BYJ0 223 aa18.22■□□□□ 0.51
PVT1-220ENST00000524165 MTG2Q9H4K7 406 aa18.22■□□□□ 0.51
PVT1-220ENST00000524165 EVA1BQ9NVM1 165 aa18.22■□□□□ 0.51
PVT1-220ENST00000524165 STK17AQ9UEE5 414 aa18.22■□□□□ 0.51
PVT1-220ENST00000524165 MAN2B2Q9Y2E5 1009 aa18.22■□□□□ 0.51
PVT1-220ENST00000524165 SIN3BO75182 1162 aa18.21■□□□□ 0.51
PVT1-220ENST00000524165 GJB6O95452 261 aa18.21■□□□□ 0.51
PVT1-220ENST00000524165 GOT1P17174 413 aa18.21■□□□□ 0.51
PVT1-220ENST00000524165 SLC8A1P32418 973 aa18.21■□□□□ 0.51
PVT1-220ENST00000524165 EHHADHQ08426 723 aa18.21■□□□□ 0.51
PVT1-220ENST00000524165 MAPK8IP2Q13387 824 aaPredicted RBP18.21■□□□□ 0.51
PVT1-220ENST00000524165 ARID5BQ14865 1188 aa18.21■□□□□ 0.51
PVT1-220ENST00000524165 SNRNP35Q16560 246 aaKnown RBP18.21■□□□□ 0.51
PVT1-220ENST00000524165 HNRNPA1L2Q32P51 320 aaKnown RBP18.21■□□□□ 0.51
PVT1-220ENST00000524165 MCTP1Q6DN14 999 aa18.21■□□□□ 0.51
PVT1-220ENST00000524165 PRPF39Q86UA1 669 aaKnown RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 204.7 ms