RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 SGSHP51688 502 aa16.28■□□□□ 0.2
HDAC6-236ENST00000498808 NXPH1P58417 271 aa16.28■□□□□ 0.2
HDAC6-236ENST00000498808 SLC39A14Q15043 492 aa16.28■□□□□ 0.2
HDAC6-236ENST00000498808 KNOP1Q1ED39 458 aaKnown RBP16.28■□□□□ 0.2
HDAC6-236ENST00000498808 ARHGAP40Q5TG30 622 aa16.28■□□□□ 0.2
HDAC6-236ENST00000498808 KDM7AQ6ZMT4 941 aa16.28■□□□□ 0.2
HDAC6-236ENST00000498808 UNC13DQ70J99 1090 aa16.28■□□□□ 0.2
HDAC6-236ENST00000498808 SV2AQ7L0J3 742 aa16.28■□□□□ 0.2
HDAC6-236ENST00000498808 HIC2Q96JB3 615 aa16.28■□□□□ 0.2
HDAC6-236ENST00000498808 NEUROG2Q9H2A3 272 aa16.28■□□□□ 0.2
HDAC6-236ENST00000498808 APOBEC3GQ9HC16 384 aaKnown RBP16.28■□□□□ 0.2
HDAC6-236ENST00000498808 SLC39A2Q9NP94 309 aa16.28■□□□□ 0.2
HDAC6-236ENST00000498808 STOML2Q9UJZ1 356 aa16.28■□□□□ 0.2
HDAC6-236ENST00000498808 SCML1Q9UN30 329 aa16.28■□□□□ 0.2
HDAC6-236ENST00000498808 PCDHB1Q9Y5F3 818 aa16.28■□□□□ 0.2
HDAC6-236ENST00000498808 MID1O15344 667 aa16.27■□□□□ 0.2
HDAC6-236ENST00000498808 SIN3BO75182 1162 aa16.27■□□□□ 0.2
HDAC6-236ENST00000498808 HLA-DRAP01903 254 aa16.27■□□□□ 0.2
HDAC6-236ENST00000498808 ATP5BP06576 529 aaKnown RBP16.27■□□□□ 0.2
HDAC6-236ENST00000498808 ACP1P24666 158 aa16.27■□□□□ 0.2
HDAC6-236ENST00000498808 CASP1P29466 404 aa16.27■□□□□ 0.2
HDAC6-236ENST00000498808 CD70P32970 193 aa16.27■□□□□ 0.2
HDAC6-236ENST00000498808 RXRGP48443 463 aa16.27■□□□□ 0.2
HDAC6-236ENST00000498808 PCBP4P57723 403 aaKnown RBP16.27■□□□□ 0.2
HDAC6-236ENST00000498808 TMPRSS3P57727 454 aa16.27■□□□□ 0.2
HDAC6-236ENST00000498808 YWHAGP61981 247 aaKnown RBP eCLIP16.27■□□□□ 0.2
HDAC6-236ENST00000498808 PROX2Q3B8N5 592 aa16.27■□□□□ 0.2
HDAC6-236ENST00000498808 RAB41Q5JT25 222 aa16.27■□□□□ 0.2
HDAC6-236ENST00000498808 ARHGAP18Q8N392 663 aa16.27■□□□□ 0.2
HDAC6-236ENST00000498808 OR2T34Q8NGX1 318 aa16.27■□□□□ 0.2
HDAC6-236ENST00000498808 TTC9Q92623 222 aa16.27■□□□□ 0.2
HDAC6-236ENST00000498808 DHX58Q96C10 678 aa16.27■□□□□ 0.2
HDAC6-236ENST00000498808 TMA16Q96EY4 203 aaKnown RBP16.27■□□□□ 0.2
HDAC6-236ENST00000498808 C7orf25Q9BPX7 421 aa16.27■□□□□ 0.2
HDAC6-236ENST00000498808 CUEDC2Q9H467 287 aa16.27■□□□□ 0.2
HDAC6-236ENST00000498808 DMAC2Q9NW81 257 aa16.27■□□□□ 0.2
HDAC6-236ENST00000498808 ADAMTS1Q9UHI8 967 aa16.27■□□□□ 0.2
HDAC6-236ENST00000498808 LRRC72A6NJI9 287 aa16.26■□□□□ 0.19
HDAC6-236ENST00000498808 TLR4O00206 839 aa16.26■□□□□ 0.19
HDAC6-236ENST00000498808 MT-CO3P00414 261 aa16.26■□□□□ 0.19
HDAC6-236ENST00000498808 C6P13671 934 aa16.26■□□□□ 0.19
HDAC6-236ENST00000498808 CD58P19256 250 aa16.26■□□□□ 0.19
HDAC6-236ENST00000498808 POLR2EP19388 210 aaKnown RBP16.26■□□□□ 0.19
HDAC6-236ENST00000498808 PIK3CAP42336 1068 aa16.26■□□□□ 0.19
HDAC6-236ENST00000498808 HARS2P49590 506 aaKnown RBP16.26■□□□□ 0.19
HDAC6-236ENST00000498808 CCR5P51681 352 aa16.26■□□□□ 0.19
HDAC6-236ENST00000498808 ZNF445P59923 1031 aa16.26■□□□□ 0.19
HDAC6-236ENST00000498808 AMPD3Q01432 767 aa16.26■□□□□ 0.19
HDAC6-236ENST00000498808 KCNC4Q03721 635 aa16.26■□□□□ 0.19
HDAC6-236ENST00000498808 CST6Q15828 149 aa16.26■□□□□ 0.19
HDAC6-236ENST00000498808 C1orf220Q5T0J3 134 aa16.26■□□□□ 0.19
HDAC6-236ENST00000498808 BHLHA9Q7RTU4 235 aa16.26■□□□□ 0.19
HDAC6-236ENST00000498808 PIGZQ86VD9 579 aa16.26■□□□□ 0.19
HDAC6-236ENST00000498808 SPATS2Q86XZ4 545 aaKnown RBP16.26■□□□□ 0.19
HDAC6-236ENST00000498808 NDRG1Q92597 394 aaKnown RBP16.26■□□□□ 0.19
HDAC6-236ENST00000498808 SERAC1Q96JX3 654 aa16.26■□□□□ 0.19
HDAC6-236ENST00000498808 ZNF578Q96N58 590 aaPredicted RBP16.26■□□□□ 0.19
HDAC6-236ENST00000498808 BACH2Q9BYV9 841 aa16.26■□□□□ 0.19
HDAC6-236ENST00000498808 ERVMER34-1Q9H9K5 563 aa16.26■□□□□ 0.19
HDAC6-236ENST00000498808 CYP3A43Q9HB55 503 aa16.26■□□□□ 0.19
HDAC6-236ENST00000498808 RNASEH2AO75792 299 aaKnown RBP16.25■□□□□ 0.19
HDAC6-236ENST00000498808 UCNP55089 124 aa16.25■□□□□ 0.19
HDAC6-236ENST00000498808 HNRNPA1L2Q32P51 320 aaKnown RBP16.25■□□□□ 0.19
HDAC6-236ENST00000498808 ADGRF1Q5T601 910 aa16.25■□□□□ 0.19
HDAC6-236ENST00000498808 BROXQ5VW32 411 aa16.25■□□□□ 0.19
HDAC6-236ENST00000498808 DHX40Q8IX18 779 aaKnown RBP16.25■□□□□ 0.19
HDAC6-236ENST00000498808 OXR1Q8N573 874 aa16.25■□□□□ 0.19
HDAC6-236ENST00000498808 LMLNQ96KR4 655 aa16.25■□□□□ 0.19
HDAC6-236ENST00000498808 BLZF1Q9H2G9 400 aa16.25■□□□□ 0.19
HDAC6-236ENST00000498808 SFMBT1Q9UHJ3 866 aa16.25■□□□□ 0.19
HDAC6-236ENST00000498808 FZD4Q9ULV1 537 aa16.25■□□□□ 0.19
HDAC6-236ENST00000498808 HBS1LQ9Y450 684 aaKnown RBP16.25■□□□□ 0.19
HDAC6-236ENST00000498808 PTPN13Q12923 2485 aa16.25■□□□□ 0.19
HDAC6-236ENST00000498808 NYNRINQ9P2P1 1898 aaKnown RBP16.25■□□□□ 0.19
HDAC6-236ENST00000498808 TRIM38O00635 465 aa16.24■□□□□ 0.19
HDAC6-236ENST00000498808 SDC3O75056 442 aa16.24■□□□□ 0.19
HDAC6-236ENST00000498808 WISP1O95388 367 aa16.24■□□□□ 0.19
HDAC6-236ENST00000498808 MPOP05164 745 aa16.24■□□□□ 0.19
HDAC6-236ENST00000498808 ADPRHP54922 357 aa16.24■□□□□ 0.19
HDAC6-236ENST00000498808 PPP2CBP62714 309 aa16.24■□□□□ 0.19
HDAC6-236ENST00000498808 PPP2CAP67775 309 aa16.24■□□□□ 0.19
HDAC6-236ENST00000498808 C8orf34Q49A92 452 aa16.24■□□□□ 0.19
HDAC6-236ENST00000498808 ZNF394Q53GI3 561 aa16.24■□□□□ 0.19
HDAC6-236ENST00000498808 PM20D1Q6GTS8 502 aa16.24■□□□□ 0.19
HDAC6-236ENST00000498808 SLC9A9Q8IVB4 645 aa16.24■□□□□ 0.19
HDAC6-236ENST00000498808 MMAAQ8IVH4 418 aaKnown RBP16.24■□□□□ 0.19
HDAC6-236ENST00000498808 AADATQ8N5Z0 425 aa16.24■□□□□ 0.19
HDAC6-236ENST00000498808 GOLGA5Q8TBA6 731 aa16.24■□□□□ 0.19
HDAC6-236ENST00000498808 TMC2Q8TDI7 906 aa16.24■□□□□ 0.19
HDAC6-236ENST00000498808 SNRNP27Q8WVK2 155 aaKnown RBP16.24■□□□□ 0.19
HDAC6-236ENST00000498808 MRGPRX3Q96LB0 322 aa16.24■□□□□ 0.19
HDAC6-236ENST00000498808 OMDQ99983 421 aa16.24■□□□□ 0.19
HDAC6-236ENST00000498808 ULBP1Q9BZM6 244 aa16.24■□□□□ 0.19
HDAC6-236ENST00000498808 NIF3L1Q9GZT8 377 aa16.24■□□□□ 0.19
HDAC6-236ENST00000498808 INTS6Q9UL03 887 aaKnown RBP16.24■□□□□ 0.19
HDAC6-236ENST00000498808 MSI1O43347 362 aaKnown RBP16.23■□□□□ 0.19
HDAC6-236ENST00000498808 LATO43561 262 aa16.23■□□□□ 0.19
HDAC6-236ENST00000498808 SIGLEC6O43699 453 aa16.23■□□□□ 0.19
HDAC6-236ENST00000498808 SLC28A2O43868 658 aa16.23■□□□□ 0.19
HDAC6-236ENST00000498808 RNASEH1O60930 286 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms