RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 NEDD8-MDP1E9PL57 170 aa20.02■□□□□ 0.8
PCOLCE-208ENST00000487172 OPRD1P41143 372 aa20.02■□□□□ 0.8
PCOLCE-208ENST00000487172 SLC1A1P43005 524 aa20.02■□□□□ 0.8
PCOLCE-208ENST00000487172 SOX9P48436 509 aa20.02■□□□□ 0.8
PCOLCE-208ENST00000487172 SLC25A11Q02978 314 aaKnown RBP20.02■□□□□ 0.8
PCOLCE-208ENST00000487172 HADHQ16836 314 aaKnown RBP20.02■□□□□ 0.8
PCOLCE-208ENST00000487172 ARTNQ5T4W7 220 aa20.02■□□□□ 0.8
PCOLCE-208ENST00000487172 TTC39BQ5VTQ0 682 aaPredicted RBP20.02■□□□□ 0.8
PCOLCE-208ENST00000487172 LRRC31Q6UY01 552 aa20.02■□□□□ 0.8
PCOLCE-208ENST00000487172 TPRG1Q6ZUI0 275 aa20.02■□□□□ 0.8
PCOLCE-208ENST00000487172 CYP4V2Q6ZWL3 525 aaPredicted RBP20.02■□□□□ 0.8
PCOLCE-208ENST00000487172 C14orf80Q86SX3 495 aa20.02■□□□□ 0.8
PCOLCE-208ENST00000487172 TPCN2Q8NHX9 752 aa20.02■□□□□ 0.8
PCOLCE-208ENST00000487172 MYEOVQ96EZ4 313 aa20.02■□□□□ 0.8
PCOLCE-208ENST00000487172 PRICKLE1Q96MT3 831 aaPredicted RBP20.02■□□□□ 0.8
PCOLCE-208ENST00000487172 PEBP4Q96S96 227 aa20.02■□□□□ 0.8
PCOLCE-208ENST00000487172 SLC2A11Q9BYW1 496 aa20.02■□□□□ 0.8
PCOLCE-208ENST00000487172 TSGA10Q9BZW7 698 aa20.02■□□□□ 0.8
PCOLCE-208ENST00000487172 OR12D3Q9UGF7 316 aa20.02■□□□□ 0.8
PCOLCE-208ENST00000487172 VANGL2Q9ULK5 521 aa20.02■□□□□ 0.8
PCOLCE-208ENST00000487172 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.01■□□□□ 0.79
PCOLCE-208ENST00000487172 IL1R2P27930 398 aa20.01■□□□□ 0.79
PCOLCE-208ENST00000487172 HOXD9P28356 352 aaPredicted RBP20.01■□□□□ 0.79
PCOLCE-208ENST00000487172 L1CAMP32004 1257 aa20.01■□□□□ 0.79
PCOLCE-208ENST00000487172 SGSHP51688 502 aa20.01■□□□□ 0.79
PCOLCE-208ENST00000487172 RABGAP1LQ5R372 815 aa20.01■□□□□ 0.79
PCOLCE-208ENST00000487172 MANEALQ5VSG8 457 aa20.01■□□□□ 0.79
PCOLCE-208ENST00000487172 DAB2IPQ5VWQ8 1189 aa20.01■□□□□ 0.79
PCOLCE-208ENST00000487172 ZNF852Q6ZMS4 543 aa20.01■□□□□ 0.79
PCOLCE-208ENST00000487172 SUGP1Q8IWZ8 645 aaKnown RBP20.01■□□□□ 0.79
PCOLCE-208ENST00000487172 SIX5Q8N196 739 aa20.01■□□□□ 0.79
PCOLCE-208ENST00000487172 ZNF557Q8N988 423 aaPredicted RBP20.01■□□□□ 0.79
PCOLCE-208ENST00000487172 TEKT4Q8WW24 435 aa20.01■□□□□ 0.79
PCOLCE-208ENST00000487172 FAM3CQ92520 227 aa20.01■□□□□ 0.79
PCOLCE-208ENST00000487172 CD101Q93033 1021 aa20.01■□□□□ 0.79
PCOLCE-208ENST00000487172 IGSF8Q969P0 613 aa20.01■□□□□ 0.79
PCOLCE-208ENST00000487172 NELL2Q99435 816 aa20.01■□□□□ 0.79
PCOLCE-208ENST00000487172 SNRNP25Q9BV90 132 aaKnown RBP20.01■□□□□ 0.79
PCOLCE-208ENST00000487172 RETREG1Q9H6L5 497 aa20.01■□□□□ 0.79
PCOLCE-208ENST00000487172 PPARGC1AQ9UBK2 798 aaKnown RBP20.01■□□□□ 0.79
PCOLCE-208ENST00000487172 AP4E1Q9UPM8 1137 aa20.01■□□□□ 0.79
PCOLCE-208ENST00000487172 NCOR1O75376 2440 aa20.01■□□□□ 0.79
PCOLCE-208ENST00000487172 A0A0A0MRY4 1105 aa20■□□□□ 0.79
PCOLCE-208ENST00000487172 E9PAM4 449 aa20■□□□□ 0.79
PCOLCE-208ENST00000487172 KRT86O43790 486 aa20■□□□□ 0.79
PCOLCE-208ENST00000487172 BUB1BO60566 1050 aaPredicted RBP20■□□□□ 0.79
PCOLCE-208ENST00000487172 TBL1XO60907 577 aa20■□□□□ 0.79
PCOLCE-208ENST00000487172 TULP3O75386 442 aa20■□□□□ 0.79
PCOLCE-208ENST00000487172 TCF4P15884 667 aa20■□□□□ 0.79
PCOLCE-208ENST00000487172 GALK1P51570 392 aa20■□□□□ 0.79
PCOLCE-208ENST00000487172 ZNF135P52742 658 aaPredicted RBP20■□□□□ 0.79
PCOLCE-208ENST00000487172 RPS24P62847 133 aaKnown RBP20■□□□□ 0.79
PCOLCE-208ENST00000487172 SEMA3BQ13214 749 aa20■□□□□ 0.79
PCOLCE-208ENST00000487172 IFI16Q16666 785 aaKnown RBP20■□□□□ 0.79
PCOLCE-208ENST00000487172 PREPLQ4J6C6 727 aaPredicted RBP20■□□□□ 0.79
PCOLCE-208ENST00000487172 C11orf63Q6NUN7 778 aa20■□□□□ 0.79
PCOLCE-208ENST00000487172 TXNDC11Q6PKC3 985 aa20■□□□□ 0.79
PCOLCE-208ENST00000487172 C12orf40Q86WS4 652 aa20■□□□□ 0.79
PCOLCE-208ENST00000487172 RNF10Q8N5U6 811 aaKnown RBP20■□□□□ 0.79
PCOLCE-208ENST00000487172 NAT16Q8N8M0 369 aa20■□□□□ 0.79
PCOLCE-208ENST00000487172 ZNF830Q96NB3 372 aaPredicted RBP20■□□□□ 0.79
PCOLCE-208ENST00000487172 RPRD1AQ96P16 312 aaPredicted RBP20■□□□□ 0.79
PCOLCE-208ENST00000487172 P2RY13Q9BPV8 354 aa20■□□□□ 0.79
PCOLCE-208ENST00000487172 MAGEB5Q9BZ81 275 aa20■□□□□ 0.79
PCOLCE-208ENST00000487172 PLK2Q9NYY3 685 aa20■□□□□ 0.79
PCOLCE-208ENST00000487172 MRPS17Q9Y2R5 130 aaKnown RBP20■□□□□ 0.79
PCOLCE-208ENST00000487172 SNX10Q9Y5X0 201 aa20■□□□□ 0.79
PCOLCE-208ENST00000487172 A0A0U1RQJ8 604 aa19.99■□□□□ 0.79
PCOLCE-208ENST00000487172 KANSL1LA0AUZ9 987 aa19.99■□□□□ 0.79
PCOLCE-208ENST00000487172 TMEM110-MUSTN1A8MSY1 372 aa19.99■□□□□ 0.79
PCOLCE-208ENST00000487172 BUB1O43683 1085 aa19.99■□□□□ 0.79
PCOLCE-208ENST00000487172 CISD3P0C7P0 127 aa19.99■□□□□ 0.79
PCOLCE-208ENST00000487172 RARAP10276 462 aa19.99■□□□□ 0.79
PCOLCE-208ENST00000487172 HTR7P34969 479 aa19.99■□□□□ 0.79
PCOLCE-208ENST00000487172 GGCXP38435 758 aa19.99■□□□□ 0.79
PCOLCE-208ENST00000487172 SLC6A11P48066 632 aa19.99■□□□□ 0.79
PCOLCE-208ENST00000487172 TMEM196Q5HYL7 178 aa19.99■□□□□ 0.79
PCOLCE-208ENST00000487172 CHST9Q7L1S5 443 aa19.99■□□□□ 0.79
PCOLCE-208ENST00000487172 POLNQ7Z5Q5 900 aa19.99■□□□□ 0.79
PCOLCE-208ENST00000487172 CPNE8Q86YQ8 564 aa19.99■□□□□ 0.79
PCOLCE-208ENST00000487172 CFAP52Q8N1V2 620 aa19.99■□□□□ 0.79
PCOLCE-208ENST00000487172 PHTF2Q8N3S3 785 aa19.99■□□□□ 0.79
PCOLCE-208ENST00000487172 FIBINQ8TAL6 211 aa19.99■□□□□ 0.79
PCOLCE-208ENST00000487172 ATRIPQ8WXE1 791 aa19.99■□□□□ 0.79
PCOLCE-208ENST00000487172 PNKPQ96T60 521 aa19.99■□□□□ 0.79
PCOLCE-208ENST00000487172 DEC1Q9P2X7 70 aa19.99■□□□□ 0.79
PCOLCE-208ENST00000487172 SLC27A6Q9Y2P4 619 aa19.99■□□□□ 0.79
PCOLCE-208ENST00000487172 ALG6Q9Y672 507 aa19.99■□□□□ 0.79
PCOLCE-208ENST00000487172 KIAA1549LQ6ZVL6 1849 aa19.98■□□□□ 0.79
PCOLCE-208ENST00000487172 DOCK4Q8N1I0 1966 aa19.98■□□□□ 0.79
PCOLCE-208ENST00000487172 A0A1B0GVM2 712 aa19.98■□□□□ 0.79
PCOLCE-208ENST00000487172 TCAF2A6NFQ2 919 aa19.98■□□□□ 0.79
PCOLCE-208ENST00000487172 FAM72CH0Y354 149 aa19.98■□□□□ 0.79
PCOLCE-208ENST00000487172 SRGAP2O75044 1071 aa19.98■□□□□ 0.79
PCOLCE-208ENST00000487172 CLDN11O75508 207 aa19.98■□□□□ 0.79
PCOLCE-208ENST00000487172 LRIG2O94898 1065 aa19.98■□□□□ 0.79
PCOLCE-208ENST00000487172 LUC7L3O95232 432 aaKnown RBP19.98■□□□□ 0.79
PCOLCE-208ENST00000487172 KRT7P08729 469 aa19.98■□□□□ 0.79
PCOLCE-208ENST00000487172 HOXC13P31276 330 aa19.98■□□□□ 0.79
PCOLCE-208ENST00000487172 NAP1L1P55209 391 aaKnown RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms