RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, human

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRAT1-205	ENST00000473879	PSMB7	Q99436	277 aa		13.76	□□□□□ -0.21
BRAT1-205	ENST00000473879	IER2	Q9BTL4	223 aa		13.76	□□□□□ -0.21
BRAT1-205	ENST00000473879	EBF3	Q9H4W6	596 aa		13.76	□□□□□ -0.21
BRAT1-205	ENST00000473879	FAM204A	Q9H8W3	233 aa		13.76	□□□□□ -0.21
BRAT1-205	ENST00000473879	OSER1	Q9NX31	292 aa		13.76	□□□□□ -0.21
BRAT1-205	ENST00000473879	DUS2	Q9NX74	493 aa	Known RBP	13.76	□□□□□ -0.21
BRAT1-205	ENST00000473879	USP18	Q9UMW8	372 aa		13.76	□□□□□ -0.21
BRAT1-205	ENST00000473879	NAALADL1	Q9UQQ1	740 aa		13.76	□□□□□ -0.21
BRAT1-205	ENST00000473879		M0QYT0	321 aa		13.75	□□□□□ -0.21
BRAT1-205	ENST00000473879	LEFTY2	O00292	366 aa		13.75	□□□□□ -0.21
BRAT1-205	ENST00000473879	ENDOD1	O94919	500 aa		13.75	□□□□□ -0.21
BRAT1-205	ENST00000473879	FYN	P06241	537 aa		13.75	□□□□□ -0.21
BRAT1-205	ENST00000473879	CHRNB1	P11230	501 aa		13.75	□□□□□ -0.21
BRAT1-205	ENST00000473879	MIP	P30301	263 aa		13.75	□□□□□ -0.21
BRAT1-205	ENST00000473879	CXCR5	P32302	372 aa		13.75	□□□□□ -0.21
BRAT1-205	ENST00000473879	PAFAH1B1	P43034	410 aa		13.75	□□□□□ -0.21
BRAT1-205	ENST00000473879	PEX5	P50542	639 aa		13.75	□□□□□ -0.21
BRAT1-205	ENST00000473879	HDAC4	P56524	1084 aa		13.75	□□□□□ -0.21
BRAT1-205	ENST00000473879	SLC25A11	Q02978	314 aa	Known RBP	13.75	□□□□□ -0.21
BRAT1-205	ENST00000473879	DEUP1	Q05D60	604 aa		13.75	□□□□□ -0.21
BRAT1-205	ENST00000473879	HECTD3	Q5T447	861 aa		13.75	□□□□□ -0.21
BRAT1-205	ENST00000473879	DAB2IP	Q5VWQ8	1189 aa		13.75	□□□□□ -0.21
BRAT1-205	ENST00000473879	SYPL2	Q5VXT5	272 aa		13.75	□□□□□ -0.21
BRAT1-205	ENST00000473879	TRIM68	Q6AZZ1	485 aa		13.75	□□□□□ -0.21
BRAT1-205	ENST00000473879	MSANTD2	Q6P1R3	559 aa		13.75	□□□□□ -0.21
BRAT1-205	ENST00000473879	TXNDC11	Q6PKC3	985 aa		13.75	□□□□□ -0.21
BRAT1-205	ENST00000473879	MAMSTR	Q6ZN01	415 aa		13.75	□□□□□ -0.21
BRAT1-205	ENST00000473879	RSRC2	Q7L4I2	434 aa	Known RBP	13.75	□□□□□ -0.21
BRAT1-205	ENST00000473879	TEKT4	Q8WW24	435 aa		13.75	□□□□□ -0.21
BRAT1-205	ENST00000473879	EDEM1	Q92611	657 aa		13.75	□□□□□ -0.21
BRAT1-205	ENST00000473879	RBM41	Q96IZ5	413 aa	Known RBP	13.75	□□□□□ -0.21
BRAT1-205	ENST00000473879	CHRD	Q9H2X0	955 aa		13.75	□□□□□ -0.21
BRAT1-205	ENST00000473879	L2HGDH	Q9H9P8	463 aa		13.75	□□□□□ -0.21
BRAT1-205	ENST00000473879	LMAN1L	Q9HAT1	526 aa		13.75	□□□□□ -0.21
BRAT1-205	ENST00000473879	NMUR1	Q9HB89	426 aa		13.75	□□□□□ -0.21
BRAT1-205	ENST00000473879	FAM86C1	Q9NVL1	165 aa		13.75	□□□□□ -0.21
BRAT1-205	ENST00000473879	CPQ	Q9Y646	472 aa		13.75	□□□□□ -0.21
BRAT1-205	ENST00000473879	CACNA1H	O95180	2353 aa		13.74	□□□□□ -0.21
BRAT1-205	ENST00000473879	OTOL1	A6NHN0	477 aa	Predicted RBP	13.74	□□□□□ -0.21
BRAT1-205	ENST00000473879	PROB1	E7EW31	1015 aa		13.74	□□□□□ -0.21
BRAT1-205	ENST00000473879	COCH	O43405	550 aa		13.74	□□□□□ -0.21
BRAT1-205	ENST00000473879	LAMTOR5	O43504	91 aa		13.74	□□□□□ -0.21
BRAT1-205	ENST00000473879	CEP104	O60308	925 aa		13.74	□□□□□ -0.21
BRAT1-205	ENST00000473879	GREM1	O60565	184 aa		13.74	□□□□□ -0.21
BRAT1-205	ENST00000473879	SRGAP2	O75044	1071 aa		13.74	□□□□□ -0.21
BRAT1-205	ENST00000473879	TRUB2	O95900	331 aa	Known RBP	13.74	□□□□□ -0.21
BRAT1-205	ENST00000473879	KRT1	P04264	644 aa		13.74	□□□□□ -0.21
BRAT1-205	ENST00000473879	MBL2	P11226	248 aa	Predicted RBP	13.74	□□□□□ -0.21
BRAT1-205	ENST00000473879	ARSA	P15289	507 aa		13.74	□□□□□ -0.21
BRAT1-205	ENST00000473879	NBL1	P41271	181 aa		13.74	□□□□□ -0.21
BRAT1-205	ENST00000473879	IFNAR2	P48551	515 aa		13.74	□□□□□ -0.21
BRAT1-205	ENST00000473879	MARCKSL1	P49006	195 aa		13.74	□□□□□ -0.21
BRAT1-205	ENST00000473879	AIF1	P55008	147 aa		13.74	□□□□□ -0.21
BRAT1-205	ENST00000473879	LRRC32	Q14392	662 aa		13.74	□□□□□ -0.21
BRAT1-205	ENST00000473879	EML3	Q32P44	896 aa		13.74	□□□□□ -0.21
BRAT1-205	ENST00000473879	BOLA3	Q53S33	107 aa		13.74	□□□□□ -0.21
BRAT1-205	ENST00000473879	DGKK	Q5KSL6	1271 aa		13.74	□□□□□ -0.21
BRAT1-205	ENST00000473879	SCYL2	Q6P3W7	929 aa		13.74	□□□□□ -0.21
BRAT1-205	ENST00000473879	BNIPL	Q7Z465	357 aa		13.74	□□□□□ -0.21
BRAT1-205	ENST00000473879	DDX42	Q86XP3	938 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
BRAT1-205	ENST00000473879	MAML2	Q8IZL2	1156 aa	Predicted RBP	13.74	□□□□□ -0.21
BRAT1-205	ENST00000473879	CPA6	Q8N4T0	437 aa		13.74	□□□□□ -0.21
BRAT1-205	ENST00000473879	ARFGAP1	Q8N6T3	406 aa		13.74	□□□□□ -0.21
BRAT1-205	ENST00000473879	CEP112	Q8N8E3	955 aa		13.74	□□□□□ -0.21
BRAT1-205	ENST00000473879	EXD1	Q8NHP7	514 aa		13.74	□□□□□ -0.21
BRAT1-205	ENST00000473879	DQX1	Q8TE96	717 aa	Known RBP	13.74	□□□□□ -0.21
BRAT1-205	ENST00000473879	ALG3	Q92685	438 aa		13.74	□□□□□ -0.21
BRAT1-205	ENST00000473879	ATP2A3	Q93084	1043 aa		13.74	□□□□□ -0.21
BRAT1-205	ENST00000473879	SERPINB11	Q96P15	392 aa		13.74	□□□□□ -0.21
BRAT1-205	ENST00000473879	PHOX2B	Q99453	314 aa		13.74	□□□□□ -0.21
BRAT1-205	ENST00000473879	NAP1L3	Q99457	506 aa	Predicted RBP	13.74	□□□□□ -0.21
BRAT1-205	ENST00000473879	ECT2	Q9H8V3	914 aa		13.74	□□□□□ -0.21
BRAT1-205	ENST00000473879	ZWILCH	Q9H900	591 aa		13.74	□□□□□ -0.21
BRAT1-205	ENST00000473879	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
BRAT1-205	ENST00000473879	SPATA6	Q9NWH7	488 aa	Predicted RBP	13.74	□□□□□ -0.21
BRAT1-205	ENST00000473879	DDIT4	Q9NX09	232 aa		13.74	□□□□□ -0.21
BRAT1-205	ENST00000473879	PCSK1N	Q9UHG2	260 aa		13.74	□□□□□ -0.21
BRAT1-205	ENST00000473879	FBXO4	Q9UKT5	387 aa		13.74	□□□□□ -0.21
BRAT1-205	ENST00000473879	F5	P12259	2224 aa		13.74	□□□□□ -0.21
BRAT1-205	ENST00000473879	PGRMC1	O00264	195 aa	Known RBP	13.73	□□□□□ -0.21
BRAT1-205	ENST00000473879	TRDMT1	O14717	391 aa	Known RBP	13.73	□□□□□ -0.21
BRAT1-205	ENST00000473879	MDM4	O15151	490 aa		13.73	□□□□□ -0.21
BRAT1-205	ENST00000473879	IRAK2	O43187	625 aa		13.73	□□□□□ -0.21
BRAT1-205	ENST00000473879	ZRANB2	O95218	330 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
BRAT1-205	ENST00000473879	SP9	P0CG40	484 aa		13.73	□□□□□ -0.21
BRAT1-205	ENST00000473879	RARG	P13631	454 aa		13.73	□□□□□ -0.21
BRAT1-205	ENST00000473879	TCF4	P15884	667 aa		13.73	□□□□□ -0.21
BRAT1-205	ENST00000473879	TFE3	P19532	575 aa	Predicted RBP	13.73	□□□□□ -0.21
BRAT1-205	ENST00000473879	COPS2	P61201	443 aa		13.73	□□□□□ -0.21
BRAT1-205	ENST00000473879	NME3	Q13232	169 aa		13.73	□□□□□ -0.21
BRAT1-205	ENST00000473879	NNT	Q13423	1086 aa		13.73	□□□□□ -0.21
BRAT1-205	ENST00000473879	PON2	Q15165	354 aa		13.73	□□□□□ -0.21
BRAT1-205	ENST00000473879	ZNF528	Q3MIS6	628 aa		13.73	□□□□□ -0.21
BRAT1-205	ENST00000473879	ARL13B	Q3SXY8	428 aa		13.73	□□□□□ -0.21
BRAT1-205	ENST00000473879	SH3PXD2A	Q5TCZ1	1133 aa		13.73	□□□□□ -0.21
BRAT1-205	ENST00000473879	DCAF12L1	Q5VU92	463 aa		13.73	□□□□□ -0.21
BRAT1-205	ENST00000473879	OTUD1	Q5VV17	481 aa	Predicted RBP	13.73	□□□□□ -0.21
BRAT1-205	ENST00000473879	TAC4	Q86UU9	113 aa		13.73	□□□□□ -0.21
BRAT1-205	ENST00000473879	PSTK	Q8IV42	348 aa	Known RBP	13.73	□□□□□ -0.21
BRAT1-205	ENST00000473879	CCDC50	Q8IVM0	306 aa		13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms