RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 TBC1D3IA0A087WXS9 549 aa6.93□□□□□ -1.3
HDAC3-206ENST00000471968 TBC1D3EA0A087X179 549 aa6.93□□□□□ -1.3
HDAC3-206ENST00000471968 TBC1D3KA0A087X1G2 549 aa6.93□□□□□ -1.3
HDAC3-206ENST00000471968 TBC1D3FA6NER0 549 aaPredicted RBP6.93□□□□□ -1.3
HDAC3-206ENST00000471968 C10orf142B7Z368 130 aa6.93□□□□□ -1.3
HDAC3-206ENST00000471968 TBC1D3LB9A6J9 549 aa6.93□□□□□ -1.3
HDAC3-206ENST00000471968 K7ERI5 159 aa6.93□□□□□ -1.3
HDAC3-206ENST00000471968 HAX1O00165 279 aa6.93□□□□□ -1.3
HDAC3-206ENST00000471968 RIOK3O14730 519 aaKnown RBP6.93□□□□□ -1.3
HDAC3-206ENST00000471968 MID1O15344 667 aa6.93□□□□□ -1.3
HDAC3-206ENST00000471968 LATO43561 262 aa6.93□□□□□ -1.3
HDAC3-206ENST00000471968 XPOTO43592 962 aaKnown RBP6.93□□□□□ -1.3
HDAC3-206ENST00000471968 SLC37A4O43826 429 aa6.93□□□□□ -1.3
HDAC3-206ENST00000471968 RAD1O60671 282 aa6.93□□□□□ -1.3
HDAC3-206ENST00000471968 RPLP0P05388 317 aaKnown RBP6.93□□□□□ -1.3
HDAC3-206ENST00000471968 TBC1D3HP0C7X1 549 aa6.93□□□□□ -1.3
HDAC3-206ENST00000471968 CYP3A7P24462 503 aa6.93□□□□□ -1.3
HDAC3-206ENST00000471968 HTR1EP28566 365 aa6.93□□□□□ -1.3
HDAC3-206ENST00000471968 RPIAP49247 311 aa6.93□□□□□ -1.3
HDAC3-206ENST00000471968 ARSDP51689 593 aa6.93□□□□□ -1.3
HDAC3-206ENST00000471968 CCL7P80098 99 aa6.93□□□□□ -1.3
HDAC3-206ENST00000471968 CDK18Q07002 472 aa6.93□□□□□ -1.3
HDAC3-206ENST00000471968 EHHADHQ08426 723 aa6.93□□□□□ -1.3
HDAC3-206ENST00000471968 IFRD2Q12894 506 aaPredicted RBP6.93□□□□□ -1.3
HDAC3-206ENST00000471968 TAF10Q12962 218 aa6.93□□□□□ -1.3
HDAC3-206ENST00000471968 EIF4HQ15056 248 aaKnown RBP6.93□□□□□ -1.3
HDAC3-206ENST00000471968 ECM1Q16610 540 aa6.93□□□□□ -1.3
HDAC3-206ENST00000471968 CFAP221Q4G0U5 840 aa6.93□□□□□ -1.3
HDAC3-206ENST00000471968 C9orf57Q5W0N0 161 aa6.93□□□□□ -1.3
HDAC3-206ENST00000471968 TMEM215Q68D42 235 aa6.93□□□□□ -1.3
HDAC3-206ENST00000471968 TBC1D3GQ6DHY5 549 aa6.93□□□□□ -1.3
HDAC3-206ENST00000471968 TBC1D3CQ6IPX1 549 aa6.93□□□□□ -1.3
HDAC3-206ENST00000471968 MPZL3Q6UWV2 235 aa6.93□□□□□ -1.3
HDAC3-206ENST00000471968 MB21D2Q8IYB1 491 aaPredicted RBP6.93□□□□□ -1.3
HDAC3-206ENST00000471968 SLFN12Q8IYM2 578 aa6.93□□□□□ -1.3
HDAC3-206ENST00000471968 UNC5BQ8IZJ1 945 aa6.93□□□□□ -1.3
HDAC3-206ENST00000471968 TBC1D3Q8IZP1 549 aaPredicted RBP6.93□□□□□ -1.3
HDAC3-206ENST00000471968 TMTC2Q8N394 836 aa6.93□□□□□ -1.3
HDAC3-206ENST00000471968 RBBP8NLQ8NC74 664 aaPredicted RBP6.93□□□□□ -1.3
HDAC3-206ENST00000471968 OR14C36Q8NHC7 312 aa6.93□□□□□ -1.3
HDAC3-206ENST00000471968 CYB5D2Q8WUJ1 264 aa6.93□□□□□ -1.3
HDAC3-206ENST00000471968 PMEPA1Q969W9 287 aa6.93□□□□□ -1.3
HDAC3-206ENST00000471968 TMEM159Q96B96 161 aa6.93□□□□□ -1.3
HDAC3-206ENST00000471968 ARSGQ96EG1 525 aa6.93□□□□□ -1.3
HDAC3-206ENST00000471968 HAPLN3Q96S86 360 aa6.93□□□□□ -1.3
HDAC3-206ENST00000471968 MYOCQ99972 504 aa6.93□□□□□ -1.3
HDAC3-206ENST00000471968 ASF1BQ9NVP2 202 aa6.93□□□□□ -1.3
HDAC3-206ENST00000471968 ARHGAP20Q9P2F6 1191 aa6.93□□□□□ -1.3
HDAC3-206ENST00000471968 DDX25Q9UHL0 483 aaKnown RBP6.93□□□□□ -1.3
HDAC3-206ENST00000471968 SALL4Q9UJQ4 1053 aa6.93□□□□□ -1.3
HDAC3-206ENST00000471968 SCML1Q9UN30 329 aa6.93□□□□□ -1.3
HDAC3-206ENST00000471968 TNRC6AQ8NDV7 1962 aaKnown RBP6.92□□□□□ -1.3
HDAC3-206ENST00000471968 A0A0B4J269 797 aa6.92□□□□□ -1.3
HDAC3-206ENST00000471968 H3BM21 787 aa6.92□□□□□ -1.3
HDAC3-206ENST00000471968 ABLIM1O14639 778 aa6.92□□□□□ -1.3
HDAC3-206ENST00000471968 PRC1O43663 620 aa6.92□□□□□ -1.3
HDAC3-206ENST00000471968 DNAJB5O75953 348 aa6.92□□□□□ -1.3
HDAC3-206ENST00000471968 CCL4P13236 92 aa6.92□□□□□ -1.3
HDAC3-206ENST00000471968 PAX3P23760 479 aa6.92□□□□□ -1.3
HDAC3-206ENST00000471968 ANXA13P27216 316 aa6.92□□□□□ -1.3
HDAC3-206ENST00000471968 PCSK6P29122 969 aa6.92□□□□□ -1.3
HDAC3-206ENST00000471968 PGDP52209 483 aa6.92□□□□□ -1.3
HDAC3-206ENST00000471968 ADPRHP54922 357 aa6.92□□□□□ -1.3
HDAC3-206ENST00000471968 HNRNPKP61978 463 aaKnown RBP eCLIP6.92□□□□□ -1.3
HDAC3-206ENST00000471968 MC1RQ01726 317 aa6.92□□□□□ -1.3
HDAC3-206ENST00000471968 TLE4Q04727 773 aa6.92□□□□□ -1.3
HDAC3-206ENST00000471968 PTK2BQ14289 1009 aa6.92□□□□□ -1.3
HDAC3-206ENST00000471968 PFKFB3Q16875 520 aaPredicted RBP6.92□□□□□ -1.3
HDAC3-206ENST00000471968 INTS6LQ5JSJ4 861 aaKnown RBP6.92□□□□□ -1.3
HDAC3-206ENST00000471968 JMJD6Q6NYC1 403 aaPredicted RBP6.92□□□□□ -1.3
HDAC3-206ENST00000471968 ZNF517Q6ZMY9 492 aaPredicted RBP6.92□□□□□ -1.3
HDAC3-206ENST00000471968 SLC35F3Q8IY50 421 aa6.92□□□□□ -1.3
HDAC3-206ENST00000471968 SDR16C5Q8N3Y7 309 aa6.92□□□□□ -1.3
HDAC3-206ENST00000471968 OR6B3Q8NGW1 331 aa6.92□□□□□ -1.3
HDAC3-206ENST00000471968 BICD2Q8TD16 824 aa6.92□□□□□ -1.3
HDAC3-206ENST00000471968 CCDC12Q8WUD4 166 aaPredicted RBP6.92□□□□□ -1.3
HDAC3-206ENST00000471968 SNRNP40Q96DI7 357 aaKnown RBP6.92□□□□□ -1.3
HDAC3-206ENST00000471968 PIWIL1Q96J94 861 aaKnown RBP6.92□□□□□ -1.3
HDAC3-206ENST00000471968 ZBTB45Q96K62 511 aaPredicted RBP6.92□□□□□ -1.3
HDAC3-206ENST00000471968 SPATA17Q96L03 361 aa6.92□□□□□ -1.3
HDAC3-206ENST00000471968 TTLL2Q9BWV7 592 aa6.92□□□□□ -1.3
HDAC3-206ENST00000471968 MRPL4Q9BYD3 311 aaKnown RBP6.92□□□□□ -1.3
HDAC3-206ENST00000471968 CPEB1Q9BZB8 566 aaKnown RBP6.92□□□□□ -1.3
HDAC3-206ENST00000471968 NACA2Q9H009 215 aa6.92□□□□□ -1.3
HDAC3-206ENST00000471968 POLD4Q9HCU8 107 aa6.92□□□□□ -1.3
HDAC3-206ENST00000471968 DIAPH3Q9NSV4 1193 aa6.92□□□□□ -1.3
HDAC3-206ENST00000471968 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.92□□□□□ -1.3
HDAC3-206ENST00000471968 EHD2Q9NZN4 543 aa6.92□□□□□ -1.3
HDAC3-206ENST00000471968 RABGEF1Q9UJ41 708 aa6.92□□□□□ -1.3
HDAC3-206ENST00000471968 TPX2Q9ULW0 747 aaKnown RBP6.92□□□□□ -1.3
HDAC3-206ENST00000471968 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.92□□□□□ -1.3
HDAC3-206ENST00000471968 MYH10P35580 1976 aa6.91□□□□□ -1.3
HDAC3-206ENST00000471968 LOC101059948A0A1B0GTJ6 334 aa6.91□□□□□ -1.3
HDAC3-206ENST00000471968 A0A1W2PQM1 296 aa6.91□□□□□ -1.3
HDAC3-206ENST00000471968 TTC26A0AVF1 554 aa6.91□□□□□ -1.3
HDAC3-206ENST00000471968 LACTBL1A8MY62 500 aa6.91□□□□□ -1.3
HDAC3-206ENST00000471968 PRAMEF26H0Y7S4 382 aa6.91□□□□□ -1.3
HDAC3-206ENST00000471968 PIRO00625 290 aa6.91□□□□□ -1.3
HDAC3-206ENST00000471968 KCNN4O15554 427 aa6.91□□□□□ -1.3
HDAC3-206ENST00000471968 GREM1O60565 184 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms