RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 PHLDB2Q86SQ0 1253 aa13.36□□□□□ -0.27
COL5A1-206ENST00000465877 MFN1Q8IWA4 741 aa13.36□□□□□ -0.27
COL5A1-206ENST00000465877 CHPFQ8IZ52 775 aa13.36□□□□□ -0.27
COL5A1-206ENST00000465877 LGI2Q8N0V4 545 aa13.36□□□□□ -0.27
COL5A1-206ENST00000465877 EMC1Q8N766 993 aa13.36□□□□□ -0.27
COL5A1-206ENST00000465877 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.36□□□□□ -0.27
COL5A1-206ENST00000465877 C3orf20Q8ND61 904 aa13.36□□□□□ -0.27
COL5A1-206ENST00000465877 CFAP57Q96MR6 1250 aa13.36□□□□□ -0.27
COL5A1-206ENST00000465877 ACOX2Q99424 681 aa13.36□□□□□ -0.27
COL5A1-206ENST00000465877 PRMT1Q99873 361 aaKnown RBP13.36□□□□□ -0.27
COL5A1-206ENST00000465877 NUP58Q9BVL2 599 aa13.36□□□□□ -0.27
COL5A1-206ENST00000465877 HAUS4Q9H6D7 363 aa13.36□□□□□ -0.27
COL5A1-206ENST00000465877 ABCB8Q9NUT2 735 aa13.36□□□□□ -0.27
COL5A1-206ENST00000465877 CACNA2D2Q9NY47 1150 aa13.36□□□□□ -0.27
COL5A1-206ENST00000465877 AIPL1Q9NZN9 384 aa13.36□□□□□ -0.27
COL5A1-206ENST00000465877 STIM2Q9P246 746 aa13.36□□□□□ -0.27
COL5A1-206ENST00000465877 GGA2Q9UJY4 613 aa13.36□□□□□ -0.27
COL5A1-206ENST00000465877 THADAQ6YHU6 1953 aa13.36□□□□□ -0.27
COL5A1-206ENST00000465877 CHD5Q8TDI0 1954 aa13.36□□□□□ -0.27
COL5A1-206ENST00000465877 ITIH6Q6UXX5 1313 aa13.36□□□□□ -0.27
COL5A1-206ENST00000465877 GVINP1Q7Z2Y8 2422 aa13.35□□□□□ -0.27
COL5A1-206ENST00000465877 FAM186AA6NE01 2351 aa13.35□□□□□ -0.27
COL5A1-206ENST00000465877 TCRBV21S2A2A0A5A6 115 aa13.35□□□□□ -0.27
COL5A1-206ENST00000465877 AXIN1O15169 862 aa13.35□□□□□ -0.27
COL5A1-206ENST00000465877 LUC7L3O95232 432 aaKnown RBP13.35□□□□□ -0.27
COL5A1-206ENST00000465877 GYPCP04921 128 aa13.35□□□□□ -0.27
COL5A1-206ENST00000465877 RDXP35241 583 aaKnown RBP13.35□□□□□ -0.27
COL5A1-206ENST00000465877 GGCXP38435 758 aa13.35□□□□□ -0.27
COL5A1-206ENST00000465877 WASP42768 502 aa13.35□□□□□ -0.27
COL5A1-206ENST00000465877 CXCR3P49682 368 aa13.35□□□□□ -0.27
COL5A1-206ENST00000465877 ATXN1P54253 815 aaKnown RBP13.35□□□□□ -0.27
COL5A1-206ENST00000465877 DEUP1Q05D60 604 aa13.35□□□□□ -0.27
COL5A1-206ENST00000465877 C1QBPQ07021 282 aaKnown RBP13.35□□□□□ -0.27
COL5A1-206ENST00000465877 SRSF5Q13243 272 aaKnown RBP13.35□□□□□ -0.27
COL5A1-206ENST00000465877 MTA1Q13330 715 aa13.35□□□□□ -0.27
COL5A1-206ENST00000465877 TDRD12Q587J7 1177 aaKnown RBP13.35□□□□□ -0.27
COL5A1-206ENST00000465877 BRMS1LQ5PSV4 323 aa13.35□□□□□ -0.27
COL5A1-206ENST00000465877 TTC39BQ5VTQ0 682 aaPredicted RBP13.35□□□□□ -0.27
COL5A1-206ENST00000465877 TMEM215Q68D42 235 aa13.35□□□□□ -0.27
COL5A1-206ENST00000465877 SND1Q7KZF4 910 aaKnown RBP eCLIP13.35□□□□□ -0.27
COL5A1-206ENST00000465877 ZNF571Q7Z3V5 609 aaPredicted RBP13.35□□□□□ -0.27
COL5A1-206ENST00000465877 BNIPLQ7Z465 357 aa13.35□□□□□ -0.27
COL5A1-206ENST00000465877 AHI1Q8N157 1196 aa13.35□□□□□ -0.27
COL5A1-206ENST00000465877 CFAP52Q8N1V2 620 aa13.35□□□□□ -0.27
COL5A1-206ENST00000465877 SUMF1Q8NBK3 374 aa13.35□□□□□ -0.27
COL5A1-206ENST00000465877 MDGA1Q8NFP4 955 aa13.35□□□□□ -0.27
COL5A1-206ENST00000465877 JOSD2Q8TAC2 188 aa13.35□□□□□ -0.27
COL5A1-206ENST00000465877 WFIKKN2Q8TEU8 576 aa13.35□□□□□ -0.27
COL5A1-206ENST00000465877 IQCDQ96DY2 449 aa13.35□□□□□ -0.27
COL5A1-206ENST00000465877 GABRG3Q99928 467 aa13.35□□□□□ -0.27
COL5A1-206ENST00000465877 TPSD1Q9BZJ3 242 aa13.35□□□□□ -0.27
COL5A1-206ENST00000465877 CIPCQ9C0C6 399 aa13.35□□□□□ -0.27
COL5A1-206ENST00000465877 POLMQ9NP87 494 aaPredicted RBP13.35□□□□□ -0.27
COL5A1-206ENST00000465877 ARHGEF38Q9NXL2 777 aa13.35□□□□□ -0.27
COL5A1-206ENST00000465877 EBF1Q9UH73 591 aa13.35□□□□□ -0.27
COL5A1-206ENST00000465877 SLC12A6Q9UHW9 1150 aa13.35□□□□□ -0.27
COL5A1-206ENST00000465877 PAXBP1Q9Y5B6 917 aa13.35□□□□□ -0.27
COL5A1-206ENST00000465877 LAMA1P25391 3075 aa13.35□□□□□ -0.27
COL5A1-206ENST00000465877 A0A1B0GVM2 712 aa13.34□□□□□ -0.27
COL5A1-206ENST00000465877 TCAF2A6NFQ2 919 aa13.34□□□□□ -0.27
COL5A1-206ENST00000465877 C2CD4BA6NLJ0 364 aa13.34□□□□□ -0.27
COL5A1-206ENST00000465877 I6L893 689 aaPredicted RBP13.34□□□□□ -0.27
COL5A1-206ENST00000465877 CBFA2T2O43439 604 aa13.34□□□□□ -0.27
COL5A1-206ENST00000465877 PAGE1O75459 146 aa13.34□□□□□ -0.27
COL5A1-206ENST00000465877 ALDH1A2O94788 518 aa13.34□□□□□ -0.27
COL5A1-206ENST00000465877 ADCY5O95622 1261 aa13.34□□□□□ -0.27
COL5A1-206ENST00000465877 PABPC1P11940 636 aaKnown RBP13.34□□□□□ -0.27
COL5A1-206ENST00000465877 SDC4P31431 198 aa13.34□□□□□ -0.27
COL5A1-206ENST00000465877 CD70P32970 193 aa13.34□□□□□ -0.27
COL5A1-206ENST00000465877 CNR2P34972 360 aa13.34□□□□□ -0.27
COL5A1-206ENST00000465877 IL12RB1P42701 662 aa13.34□□□□□ -0.27
COL5A1-206ENST00000465877 KLHL30Q0D2K2 578 aa13.34□□□□□ -0.27
COL5A1-206ENST00000465877 LMAN2Q12907 356 aa13.34□□□□□ -0.27
COL5A1-206ENST00000465877 CDO1Q16878 200 aa13.34□□□□□ -0.27
COL5A1-206ENST00000465877 FUT11Q495W5 492 aa13.34□□□□□ -0.27
COL5A1-206ENST00000465877 RABGAP1LQ5R372 815 aa13.34□□□□□ -0.27
COL5A1-206ENST00000465877 PPP1R2P3Q6NXS1 205 aa13.34□□□□□ -0.27
COL5A1-206ENST00000465877 DNAJC24Q6P3W2 148 aa13.34□□□□□ -0.27
COL5A1-206ENST00000465877 PRR23BQ6ZRT6 265 aa13.34□□□□□ -0.27
COL5A1-206ENST00000465877 CHST9Q7L1S5 443 aa13.34□□□□□ -0.27
COL5A1-206ENST00000465877 RASSF3Q86WH2 238 aa13.34□□□□□ -0.27
COL5A1-206ENST00000465877 CIR1Q86X95 450 aaPredicted RBP13.34□□□□□ -0.27
COL5A1-206ENST00000465877 CARNMT1Q8N4J0 409 aa13.34□□□□□ -0.27
COL5A1-206ENST00000465877 UCMAQ8WVF2 138 aa13.34□□□□□ -0.27
COL5A1-206ENST00000465877 GAB3Q8WWW8 586 aa13.34□□□□□ -0.27
COL5A1-206ENST00000465877 SELENOOQ9BVL4 669 aa13.34□□□□□ -0.27
COL5A1-206ENST00000465877 TKTL2Q9H0I9 626 aa13.34□□□□□ -0.27
COL5A1-206ENST00000465877 ANLNQ9NQW6 1124 aa13.34□□□□□ -0.27
COL5A1-206ENST00000465877 ELOVL2Q9NXB9 296 aa13.34□□□□□ -0.27
COL5A1-206ENST00000465877 TAS2R14Q9NYV8 317 aa13.34□□□□□ -0.27
COL5A1-206ENST00000465877 VANGL2Q9ULK5 521 aa13.34□□□□□ -0.27
COL5A1-206ENST00000465877 RAD54BQ9Y620 910 aa13.34□□□□□ -0.27
COL5A1-206ENST00000465877 HS3ST4Q9Y661 456 aa13.34□□□□□ -0.27
COL5A1-206ENST00000465877 GPR179Q6PRD1 2367 aa13.34□□□□□ -0.27
COL5A1-206ENST00000465877 RIF1Q5UIP0 2472 aaKnown RBP13.33□□□□□ -0.28
COL5A1-206ENST00000465877 A0A1W2PQF6 199 aa13.33□□□□□ -0.28
COL5A1-206ENST00000465877 TCRBV5S1A1TA0A578 114 aa13.33□□□□□ -0.28
COL5A1-206ENST00000465877 TMCO5BA8MYB1 307 aa13.33□□□□□ -0.28
COL5A1-206ENST00000465877 NPC1O15118 1278 aa13.33□□□□□ -0.28
COL5A1-206ENST00000465877 ATMINO43313 823 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms