RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 ZNF484Q5JVG2 852 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 INTS11Q5TA45 600 aaKnown RBP2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 FCRLBQ6BAA4 426 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 WDR93Q6P2C0 686 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 TMEM88Q6PEY1 159 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 ZNF474Q6S9Z5 364 aaPredicted RBP2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 SLC39A5Q6ZMH5 540 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 DCDC5Q6ZRR9 648 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 RTL10Q7L3V2 364 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 SYT13Q7L8C5 426 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 KRT27Q7Z3Y8 459 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 UBE2Q1Q7Z7E8 422 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 CHSY1Q86X52 802 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 P3H2Q8IVL5 708 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 GALNT4Q8N4A0 578 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 TMEM57Q8N5G2 664 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 USP38Q8NB14 1042 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 SEMA6DQ8NFY4 1073 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 CLEC4CQ8WTT0 213 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 AFG1LQ8WV93 481 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 RUBCNQ92622 972 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 AKAP1Q92667 903 aaKnown RBP eCLIP2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 C3orf49Q96BT1 292 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 MAELQ96JY0 434 aaKnown RBP2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 EIF3CQ99613 913 aaKnown RBP2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 HERC2P3Q9BVR0 1158 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 ADGRE3Q9BY15 652 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 BRD8Q9H0E9 1235 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 CHODLQ9H9P2 273 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 PLEKHA2Q9HB19 425 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 USP29Q9HBJ7 922 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 CPNE5Q9HCH3 593 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 SEPSECSQ9HD40 501 aaKnown RBP2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 TXNRD2Q9NNW7 524 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 MLXIPLQ9NP71 852 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 ASB6Q9NWX5 421 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 MTMR4Q9NYA4 1195 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 RRN3Q9NYV6 651 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 TFCP2L1Q9NZI6 479 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 RAB21Q9UL25 225 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 TRPC5Q9UL62 973 aaPredicted RBP2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 DNAJC16Q9Y2G8 782 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 PCDHA10Q9Y5I2 948 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 COPG1Q9Y678 874 aaKnown RBP2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 COX11Q9Y6N1 276 aa2.16□□□□□ -2.06
NUCKS1-202ENST00000464938 RRN3P2A6NIE6 340 aa2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 AGAP5A6NIR3 686 aa2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 TTC34A8MYJ7 566 aa2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 PRRT4C9JH25 899 aa2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 RRHO14718 337 aa2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 SEPT4O43236 478 aa2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 ALDOAP04075 364 aaKnown RBP2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 ENO1P06733 434 aaKnown RBP2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 CYP2D6P10635 497 aa2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 CYP2A6P11509 494 aaPredicted RBP2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 ACP5P13686 325 aa2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 FBLP22087 321 aaKnown RBP2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 AVPR2P30518 371 aa2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 GRK5P34947 590 aa2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 SOX2P48431 317 aa2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 RCAN1P53805 252 aa2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 ADPRHP54922 357 aa2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 ELLP55199 621 aaPredicted RBP2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 SLC37A1P57057 533 aa2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 TUBA4AP68366 448 aa2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 SLC14A1Q13336 389 aa2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 THOC5Q13769 683 aaKnown RBP2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 KCNB1Q14721 858 aa2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 RPS6KA2Q15349 733 aa2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 CNGA3Q16281 694 aa2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 CTXN3Q4LDR2 81 aa2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 WDR45BQ5MNZ6 344 aa2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 CBWD5Q5RIA9 395 aa2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 ANKRD40Q6AI12 368 aa2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 DENND1BQ6P3S1 775 aa2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 FBXO42Q6P3S6 717 aa2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 TMEM65Q6PI78 240 aa2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 VSTM1Q6UX27 236 aa2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 KIAA1324Q6UXG2 1013 aaKnown RBP2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 RANBP10Q6VN20 620 aa2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 ZNF813Q6ZN06 617 aa2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 MMS22LQ6ZRQ5 1243 aa2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 TFAP2DQ7Z6R9 452 aa2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 C2CD5Q86YS7 1000 aa2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 ADGRF3Q8IZF5 1079 aa2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 C8orf58Q8NAV2 365 aa2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 SRFBP1Q8NEF9 429 aaKnown RBP2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 BCAS4Q8TDM0 211 aa2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 WIPF2Q8TF74 440 aaPredicted RBP2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 DPF1Q92782 380 aa2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 CELF1Q92879 486 aaKnown RBP2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 MASTLQ96GX5 879 aa2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 CCDC17Q96LX7 622 aa2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 PPM1MQ96MI6 270 aa2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 COG8Q96MW5 612 aa2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 PIGSQ96S52 555 aa2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 SENP7Q9BQF6 1050 aa2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 REEP2Q9BRK0 252 aa2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 MAF1Q9H063 256 aa2.15□□□□□ -2.07
NUCKS1-202ENST00000464938 R3HDMLQ9H3Y0 253 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms