RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 SPDYCQ5MJ68 293 aa10.55□□□□□ -0.72
SF3A3-204ENST00000462258 FKBP15Q5T1M5 1219 aa10.55□□□□□ -0.72
SF3A3-204ENST00000462258 RAP1GAP2Q684P5 730 aa10.55□□□□□ -0.72
SF3A3-204ENST00000462258 OR6B2Q6IFH4 312 aa10.55□□□□□ -0.72
SF3A3-204ENST00000462258 OLFML1Q6UWY5 402 aa10.55□□□□□ -0.72
SF3A3-204ENST00000462258 SLC36A4Q6YBV0 504 aa10.55□□□□□ -0.72
SF3A3-204ENST00000462258 SLC26A9Q7LBE3 791 aa10.55□□□□□ -0.72
SF3A3-204ENST00000462258 CACUL1Q86Y37 369 aa10.55□□□□□ -0.72
SF3A3-204ENST00000462258 DEFB106AQ8N104 65 aa10.55□□□□□ -0.72
SF3A3-204ENST00000462258 CYB5D2Q8WUJ1 264 aa10.55□□□□□ -0.72
SF3A3-204ENST00000462258 PIGKQ92643 395 aa10.55□□□□□ -0.72
SF3A3-204ENST00000462258 MYEOVQ96EZ4 313 aa10.55□□□□□ -0.72
SF3A3-204ENST00000462258 BTN2A3PQ96KV6 586 aa10.55□□□□□ -0.72
SF3A3-204ENST00000462258 VPS16Q9H269 839 aa10.55□□□□□ -0.72
SF3A3-204ENST00000462258 GANQ9H2C0 597 aa10.55□□□□□ -0.72
SF3A3-204ENST00000462258 STIM2Q9P246 746 aa10.55□□□□□ -0.72
SF3A3-204ENST00000462258 XPO7Q9UIA9 1087 aaKnown RBP10.55□□□□□ -0.72
SF3A3-204ENST00000462258 PCDH15Q96QU1 1955 aa10.55□□□□□ -0.72
SF3A3-204ENST00000462258 NCOR2Q9Y618 2525 aa10.54□□□□□ -0.72
SF3A3-204ENST00000462258 SYNJ2BP-COX16A0A087WUM0 186 aa10.54□□□□□ -0.72
SF3A3-204ENST00000462258 MED19A0JLT2 244 aaPredicted RBP10.54□□□□□ -0.72
SF3A3-204ENST00000462258 LNP1A1A4G5 178 aa10.54□□□□□ -0.72
SF3A3-204ENST00000462258 DCDC2BA2VCK2 349 aa10.54□□□□□ -0.72
SF3A3-204ENST00000462258 PATE3B3GLJ2 98 aa10.54□□□□□ -0.72
SF3A3-204ENST00000462258 KHNYNO15037 678 aaKnown RBP10.54□□□□□ -0.72
SF3A3-204ENST00000462258 TIMM44O43615 452 aa10.54□□□□□ -0.72
SF3A3-204ENST00000462258 LUC7L3O95232 432 aaKnown RBP10.54□□□□□ -0.72
SF3A3-204ENST00000462258 HLA-EP13747 358 aa10.54□□□□□ -0.72
SF3A3-204ENST00000462258 TACR2P21452 398 aa10.54□□□□□ -0.72
SF3A3-204ENST00000462258 CDH5P33151 784 aaPredicted RBP10.54□□□□□ -0.72
SF3A3-204ENST00000462258 DPP6P42658 865 aa10.54□□□□□ -0.72
SF3A3-204ENST00000462258 KLK7P49862 253 aa10.54□□□□□ -0.72
SF3A3-204ENST00000462258 RPS24P62847 133 aaKnown RBP10.54□□□□□ -0.72
SF3A3-204ENST00000462258 CDK17Q00537 523 aa10.54□□□□□ -0.72
SF3A3-204ENST00000462258 LMAN2Q12907 356 aa10.54□□□□□ -0.72
SF3A3-204ENST00000462258 TAF3Q5VWG9 929 aa10.54□□□□□ -0.72
SF3A3-204ENST00000462258 MBLAC2Q68D91 279 aa10.54□□□□□ -0.72
SF3A3-204ENST00000462258 IL31Q6EBC2 164 aa10.54□□□□□ -0.72
SF3A3-204ENST00000462258 KIAA0907Q7Z7F0 614 aaPredicted RBP10.54□□□□□ -0.72
SF3A3-204ENST00000462258 ADIPOR2Q86V24 386 aa10.54□□□□□ -0.72
SF3A3-204ENST00000462258 CCDC117Q8IWD4 279 aaPredicted RBP10.54□□□□□ -0.72
SF3A3-204ENST00000462258 LGI2Q8N0V4 545 aa10.54□□□□□ -0.72
SF3A3-204ENST00000462258 CARNMT1Q8N4J0 409 aa10.54□□□□□ -0.72
SF3A3-204ENST00000462258 ATP6V0D2Q8N8Y2 350 aa10.54□□□□□ -0.72
SF3A3-204ENST00000462258 TMEM35BQ8NCS4 154 aa10.54□□□□□ -0.72
SF3A3-204ENST00000462258 ANKRD20A12PQ8NF67 263 aa10.54□□□□□ -0.72
SF3A3-204ENST00000462258 EPS8L1Q8TE68 723 aa10.54□□□□□ -0.72
SF3A3-204ENST00000462258 STK33Q9BYT3 514 aa10.54□□□□□ -0.72
SF3A3-204ENST00000462258 MKRN2Q9H000 416 aaKnown RBP10.54□□□□□ -0.72
SF3A3-204ENST00000462258 PRDM16Q9HAZ2 1276 aa10.54□□□□□ -0.72
SF3A3-204ENST00000462258 FAM207AQ9NSI2 230 aaPredicted RBP10.54□□□□□ -0.72
SF3A3-204ENST00000462258 FANCLQ9NW38 375 aa10.54□□□□□ -0.72
SF3A3-204ENST00000462258 DDIT4Q9NX09 232 aa10.54□□□□□ -0.72
SF3A3-204ENST00000462258 COX16Q9P0S2 106 aa10.54□□□□□ -0.72
SF3A3-204ENST00000462258 ADAMTS9Q9P2N4 1935 aa10.54□□□□□ -0.72
SF3A3-204ENST00000462258 PI4KAP42356 2102 aa10.54□□□□□ -0.72
SF3A3-204ENST00000462258 FAM170AA1A519 330 aa10.53□□□□□ -0.72
SF3A3-204ENST00000462258 F5H5T6 163 aa10.53□□□□□ -0.72
SF3A3-204ENST00000462258 LSM8O95777 96 aaKnown RBP10.53□□□□□ -0.72
SF3A3-204ENST00000462258 ATP5BP06576 529 aaKnown RBP10.53□□□□□ -0.72
SF3A3-204ENST00000462258 DLDP09622 509 aaKnown RBP10.53□□□□□ -0.72
SF3A3-204ENST00000462258 SLC2A3P11169 496 aa10.53□□□□□ -0.72
SF3A3-204ENST00000462258 POLR2EP19388 210 aaKnown RBP10.53□□□□□ -0.72
SF3A3-204ENST00000462258 ABCB4P21439 1286 aa10.53□□□□□ -0.72
SF3A3-204ENST00000462258 ITPKAP23677 461 aa10.53□□□□□ -0.72
SF3A3-204ENST00000462258 CCR1P32246 355 aa10.53□□□□□ -0.72
SF3A3-204ENST00000462258 HOXD12P35452 270 aa10.53□□□□□ -0.72
SF3A3-204ENST00000462258 COPB1P53618 953 aaKnown RBP10.53□□□□□ -0.72
SF3A3-204ENST00000462258 COPAP53621 1224 aa10.53□□□□□ -0.72
SF3A3-204ENST00000462258 SLC6A3Q01959 620 aa10.53□□□□□ -0.72
SF3A3-204ENST00000462258 EIF4EBP2Q13542 120 aaPredicted RBP10.53□□□□□ -0.72
SF3A3-204ENST00000462258 PTPRNQ16849 979 aa10.53□□□□□ -0.72
SF3A3-204ENST00000462258 TRIM61Q5EBN2 209 aa10.53□□□□□ -0.72
SF3A3-204ENST00000462258 FAM102AQ5T9C2 384 aaPredicted RBP10.53□□□□□ -0.72
SF3A3-204ENST00000462258 STPG1Q5TH74 334 aa10.53□□□□□ -0.72
SF3A3-204ENST00000462258 OTUD1Q5VV17 481 aaPredicted RBP10.53□□□□□ -0.72
SF3A3-204ENST00000462258 PEAR1Q5VY43 1037 aaPredicted RBP10.53□□□□□ -0.72
SF3A3-204ENST00000462258 NOP9Q86U38 636 aaKnown RBP10.53□□□□□ -0.72
SF3A3-204ENST00000462258 ZDHHC17Q8IUH5 632 aa10.53□□□□□ -0.72
SF3A3-204ENST00000462258 SYT12Q8IV01 421 aa10.53□□□□□ -0.72
SF3A3-204ENST00000462258 CFAP52Q8N1V2 620 aa10.53□□□□□ -0.72
SF3A3-204ENST00000462258 DEFB119Q8N690 84 aa10.53□□□□□ -0.72
SF3A3-204ENST00000462258 ZNF366Q8N895 744 aa10.53□□□□□ -0.72
SF3A3-204ENST00000462258 MSANTD4Q8NCY6 345 aa10.53□□□□□ -0.72
SF3A3-204ENST00000462258 ZNF397Q8NF99 534 aaPredicted RBP10.53□□□□□ -0.72
SF3A3-204ENST00000462258 OR2T3Q8NH03 318 aa10.53□□□□□ -0.72
SF3A3-204ENST00000462258 FIBINQ8TAL6 211 aa10.53□□□□□ -0.72
SF3A3-204ENST00000462258 DDX1Q92499 740 aaKnown RBP10.53□□□□□ -0.72
SF3A3-204ENST00000462258 PRCCQ92733 491 aaPredicted RBP10.53□□□□□ -0.72
SF3A3-204ENST00000462258 RNF34Q969K3 372 aa10.53□□□□□ -0.72
SF3A3-204ENST00000462258 SIPA1Q96FS4 1042 aa10.53□□□□□ -0.72
SF3A3-204ENST00000462258 HSPA12BQ96MM6 686 aa10.53□□□□□ -0.72
SF3A3-204ENST00000462258 TMEM245Q9H330 911 aa10.53□□□□□ -0.72
SF3A3-204ENST00000462258 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.53□□□□□ -0.72
SF3A3-204ENST00000462258 USP36Q9P275 1121 aaKnown RBP10.53□□□□□ -0.72
SF3A3-204ENST00000462258 EVLQ9UI08 416 aaPredicted RBP10.53□□□□□ -0.72
SF3A3-204ENST00000462258 PLA2G4CQ9UP65 541 aa10.53□□□□□ -0.72
SF3A3-204ENST00000462258 SPTBN2O15020 2390 aa10.53□□□□□ -0.72
SF3A3-204ENST00000462258 TP53BP1Q12888 1972 aaPredicted RBP10.52□□□□□ -0.72
SF3A3-204ENST00000462258 LGALS16A8MUM7 142 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms