RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 MIS12Q9H081 205 aa21.56■■□□□ 1.04
CPNE1-219ENST00000440240 GAREM1Q9H706 876 aa21.56■■□□□ 1.04
CPNE1-219ENST00000440240 PRSS16Q9NQE7 514 aa21.56■■□□□ 1.04
CPNE1-219ENST00000440240 KLK13Q9UKR3 277 aa21.56■■□□□ 1.04
CPNE1-219ENST00000440240 CKAP5Q14008 2032 aa21.56■■□□□ 1.04
CPNE1-219ENST00000440240 ZZEF1O43149 2961 aa21.56■■□□□ 1.04
CPNE1-219ENST00000440240 KNL1Q8NG31 2342 aa21.56■■□□□ 1.04
CPNE1-219ENST00000440240 GOLGA6L7A0A1B0GV03 622 aa21.55■■□□□ 1.04
CPNE1-219ENST00000440240 TYW5A2RUC4 315 aaKnown RBP21.55■■□□□ 1.04
CPNE1-219ENST00000440240 DNTTP04053 509 aa21.55■■□□□ 1.04
CPNE1-219ENST00000440240 AFF3P51826 1226 aaKnown RBP21.55■■□□□ 1.04
CPNE1-219ENST00000440240 FAM133BQ5BKY9 247 aaKnown RBP21.55■■□□□ 1.04
CPNE1-219ENST00000440240 RAB44Q7Z6P3 723 aaPredicted RBP21.55■■□□□ 1.04
CPNE1-219ENST00000440240 CCDC117Q8IWD4 279 aaPredicted RBP21.55■■□□□ 1.04
CPNE1-219ENST00000440240 SCUBE3Q8IX30 993 aa21.55■■□□□ 1.04
CPNE1-219ENST00000440240 ZNF366Q8N895 744 aa21.55■■□□□ 1.04
CPNE1-219ENST00000440240 C1orf216Q8TAB5 229 aa21.55■■□□□ 1.04
CPNE1-219ENST00000440240 FIBINQ8TAL6 211 aa21.55■■□□□ 1.04
CPNE1-219ENST00000440240 NELFBQ8WX92 580 aa21.55■■□□□ 1.04
CPNE1-219ENST00000440240 SERPINB11Q96P15 392 aa21.55■■□□□ 1.04
CPNE1-219ENST00000440240 BTBD1Q9H0C5 482 aa21.55■■□□□ 1.04
CPNE1-219ENST00000440240 TLR6Q9Y2C9 796 aa21.55■■□□□ 1.04
CPNE1-219ENST00000440240 PPP1R3GB7ZBB8 358 aa21.54■■□□□ 1.04
CPNE1-219ENST00000440240 SLC6A4P31645 630 aa21.54■■□□□ 1.04
CPNE1-219ENST00000440240 CD70P32970 193 aa21.54■■□□□ 1.04
CPNE1-219ENST00000440240 ACSL1P33121 698 aa21.54■■□□□ 1.04
CPNE1-219ENST00000440240 GPD2P43304 727 aa21.54■■□□□ 1.04
CPNE1-219ENST00000440240 ACADSBP45954 432 aa21.54■■□□□ 1.04
CPNE1-219ENST00000440240 SGSHP51688 502 aa21.54■■□□□ 1.04
CPNE1-219ENST00000440240 ST8SIA6P61647 398 aa21.54■■□□□ 1.04
CPNE1-219ENST00000440240 RPS14P62263 151 aaKnown RBP21.54■■□□□ 1.04
CPNE1-219ENST00000440240 KCNH2Q12809 1159 aa21.54■■□□□ 1.04
CPNE1-219ENST00000440240 NNTQ13423 1086 aa21.54■■□□□ 1.04
CPNE1-219ENST00000440240 MFN1Q8IWA4 741 aa21.54■■□□□ 1.04
CPNE1-219ENST00000440240 TRIM59Q8IWR1 403 aa21.54■■□□□ 1.04
CPNE1-219ENST00000440240 HJURPQ8NCD3 748 aaPredicted RBP21.54■■□□□ 1.04
CPNE1-219ENST00000440240 CLEC4CQ8WTT0 213 aa21.54■■□□□ 1.04
CPNE1-219ENST00000440240 TTC17Q96AE7 1141 aa21.54■■□□□ 1.04
CPNE1-219ENST00000440240 TRIM62Q9BVG3 475 aa21.54■■□□□ 1.04
CPNE1-219ENST00000440240 OSGEPQ9NPF4 335 aa21.54■■□□□ 1.04
CPNE1-219ENST00000440240 ST7Q9NRC1 585 aa21.54■■□□□ 1.04
CPNE1-219ENST00000440240 TM7SF3Q9NS93 570 aa21.54■■□□□ 1.04
CPNE1-219ENST00000440240 STIM2Q9P246 746 aa21.54■■□□□ 1.04
CPNE1-219ENST00000440240 APOBEC2Q9Y235 224 aaKnown RBP21.54■■□□□ 1.04
CPNE1-219ENST00000440240 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.54■■□□□ 1.04
CPNE1-219ENST00000440240 SEMA4FO95754 770 aa21.53■■□□□ 1.04
CPNE1-219ENST00000440240 ASLP04424 464 aa21.53■■□□□ 1.04
CPNE1-219ENST00000440240 FYNP06241 537 aa21.53■■□□□ 1.04
CPNE1-219ENST00000440240 RPL34P49207 117 aaKnown RBP21.53■■□□□ 1.04
CPNE1-219ENST00000440240 MARSP56192 900 aaKnown RBP21.53■■□□□ 1.04
CPNE1-219ENST00000440240 SFSWAPQ12872 951 aaKnown RBP21.53■■□□□ 1.04
CPNE1-219ENST00000440240 TEAD4Q15561 434 aa21.53■■□□□ 1.04
CPNE1-219ENST00000440240 HLA-BQ31612 363 aa21.53■■□□□ 1.04
CPNE1-219ENST00000440240 TTC31Q49AM3 519 aaPredicted RBP21.53■■□□□ 1.04
CPNE1-219ENST00000440240 BEND5Q7L4P6 421 aa21.53■■□□□ 1.04
CPNE1-219ENST00000440240 GLRX5Q86SX6 157 aa21.53■■□□□ 1.04
CPNE1-219ENST00000440240 ARHGEF19Q8IW93 802 aa21.53■■□□□ 1.04
CPNE1-219ENST00000440240 WFDC5Q8TCV5 224 aa21.53■■□□□ 1.04
CPNE1-219ENST00000440240 SETD7Q8WTS6 366 aaKnown RBP21.53■■□□□ 1.04
CPNE1-219ENST00000440240 STK32AQ8WU08 396 aa21.53■■□□□ 1.04
CPNE1-219ENST00000440240 ADAMTS14Q8WXS8 1223 aa21.53■■□□□ 1.04
CPNE1-219ENST00000440240 ZCCHC14Q8WYQ9 949 aaKnown RBP21.53■■□□□ 1.04
CPNE1-219ENST00000440240 SNX19Q92543 992 aa21.53■■□□□ 1.04
CPNE1-219ENST00000440240 FAM149B1Q96BN6 582 aa21.53■■□□□ 1.04
CPNE1-219ENST00000440240 C6orf106Q9H6K1 298 aaPredicted RBP21.53■■□□□ 1.04
CPNE1-219ENST00000440240 SGK2Q9HBY8 427 aa21.53■■□□□ 1.04
CPNE1-219ENST00000440240 PCOLCE2Q9UKZ9 415 aa21.53■■□□□ 1.04
CPNE1-219ENST00000440240 SCML1Q9UN30 329 aa21.53■■□□□ 1.04
CPNE1-219ENST00000440240 CNTN6Q9UQ52 1028 aa21.53■■□□□ 1.04
CPNE1-219ENST00000440240 NCKAP1Q9Y2A7 1128 aa21.53■■□□□ 1.04
CPNE1-219ENST00000440240 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.53■■□□□ 1.04
CPNE1-219ENST00000440240 MED7O43513 233 aa21.52■■□□□ 1.04
CPNE1-219ENST00000440240 CBFA2T3O75081 653 aa21.52■■□□□ 1.04
CPNE1-219ENST00000440240 AFPP02771 609 aaKnown RBP21.52■■□□□ 1.04
CPNE1-219ENST00000440240 FTH1P19P0C7X4 201 aa21.52■■□□□ 1.04
CPNE1-219ENST00000440240 BMP6P22004 513 aa21.52■■□□□ 1.04
CPNE1-219ENST00000440240 CSNK1EP49674 416 aaKnown RBP21.52■■□□□ 1.04
CPNE1-219ENST00000440240 MORC3Q14149 939 aa21.52■■□□□ 1.04
CPNE1-219ENST00000440240 SUZ12Q15022 739 aaKnown RBP21.52■■□□□ 1.04
CPNE1-219ENST00000440240 MEA1Q16626 185 aa21.52■■□□□ 1.04
CPNE1-219ENST00000440240 ZNF776Q68DI1 518 aaPredicted RBP21.52■■□□□ 1.04
CPNE1-219ENST00000440240 NADSYN1Q6IA69 706 aa21.52■■□□□ 1.04
CPNE1-219ENST00000440240 DBX2Q6ZNG2 339 aa21.52■■□□□ 1.04
CPNE1-219ENST00000440240 KDM1BQ8NB78 822 aa21.52■■□□□ 1.04
CPNE1-219ENST00000440240 DQX1Q8TE96 717 aaKnown RBP21.52■■□□□ 1.04
CPNE1-219ENST00000440240 SLC39A13Q96H72 371 aa21.52■■□□□ 1.04
CPNE1-219ENST00000440240 FCRL2Q96LA5 508 aaPredicted RBP21.52■■□□□ 1.04
CPNE1-219ENST00000440240 IL21RQ9HBE5 538 aa21.52■■□□□ 1.04
CPNE1-219ENST00000440240 NAALADL1Q9UQQ1 740 aa21.52■■□□□ 1.04
CPNE1-219ENST00000440240 PCDHGB2Q9Y5G2 931 aa21.52■■□□□ 1.04
CPNE1-219ENST00000440240 A0A1B0GVT2 93 aa21.51■■□□□ 1.03
CPNE1-219ENST00000440240 SRRM3A6NNA2 597 aaPredicted RBP21.51■■□□□ 1.03
CPNE1-219ENST00000440240 CAPN9O14815 690 aa21.51■■□□□ 1.03
CPNE1-219ENST00000440240 RNASEH1O60930 286 aaKnown RBP21.51■■□□□ 1.03
CPNE1-219ENST00000440240 FGFR1OPO95684 399 aaKnown RBP21.51■■□□□ 1.03
CPNE1-219ENST00000440240 CALCAP01258 141 aa21.51■■□□□ 1.03
CPNE1-219ENST00000440240 KRT5P13647 590 aa21.51■■□□□ 1.03
CPNE1-219ENST00000440240 BNC1Q01954 994 aa21.51■■□□□ 1.03
CPNE1-219ENST00000440240 CDH18Q13634 790 aa21.51■■□□□ 1.03
CPNE1-219ENST00000440240 MS4A13Q5J8X5 152 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms