RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 CBX3Q13185 183 aa5.74□□□□□ -1.49
RFC3-202ENST00000434425 EFR3AQ14156 821 aa5.74□□□□□ -1.49
RFC3-202ENST00000434425 TRIM25Q14258 630 aaKnown RBP5.74□□□□□ -1.49
RFC3-202ENST00000434425 UBE3CQ15386 1083 aa5.74□□□□□ -1.49
RFC3-202ENST00000434425 SNCBQ16143 134 aa5.74□□□□□ -1.49
RFC3-202ENST00000434425 ADCK5Q3MIX3 580 aa5.74□□□□□ -1.49
RFC3-202ENST00000434425 HSF5Q4G112 596 aaPredicted RBP5.74□□□□□ -1.49
RFC3-202ENST00000434425 SNAP47Q5SQN1 464 aa5.74□□□□□ -1.49
RFC3-202ENST00000434425 C9orf50Q5SZB4 431 aa5.74□□□□□ -1.49
RFC3-202ENST00000434425 ANXA8L1Q5VT79 327 aa5.74□□□□□ -1.49
RFC3-202ENST00000434425 IER5Q5VY09 327 aa5.74□□□□□ -1.49
RFC3-202ENST00000434425 LILRA6Q6PI73 481 aa5.74□□□□□ -1.49
RFC3-202ENST00000434425 ZNF574Q6ZN55 896 aaPredicted RBP5.74□□□□□ -1.49
RFC3-202ENST00000434425 DENND5BQ6ZUT9 1274 aa5.74□□□□□ -1.49
RFC3-202ENST00000434425 R3HCC1LQ7Z5L2 792 aaKnown RBP5.74□□□□□ -1.49
RFC3-202ENST00000434425 PLEKHH3Q7Z736 793 aa5.74□□□□□ -1.49
RFC3-202ENST00000434425 ADCK1Q86TW2 530 aa5.74□□□□□ -1.49
RFC3-202ENST00000434425 MCEMP1Q8IX19 187 aa5.74□□□□□ -1.49
RFC3-202ENST00000434425 SLC15A3Q8IY34 581 aa5.74□□□□□ -1.49
RFC3-202ENST00000434425 FBXW8Q8N3Y1 598 aa5.74□□□□□ -1.49
RFC3-202ENST00000434425 CNNM3Q8NE01 707 aa5.74□□□□□ -1.49
RFC3-202ENST00000434425 HIPK4Q8NE63 616 aa5.74□□□□□ -1.49
RFC3-202ENST00000434425 CDC26Q8NHZ8 85 aa5.74□□□□□ -1.49
RFC3-202ENST00000434425 PPP1R35Q8TAP8 253 aa5.74□□□□□ -1.49
RFC3-202ENST00000434425 SLC7A14Q8TBB6 771 aa5.74□□□□□ -1.49
RFC3-202ENST00000434425 WHAMMQ8TF30 809 aa5.74□□□□□ -1.49
RFC3-202ENST00000434425 DDI1Q8WTU0 396 aa5.74□□□□□ -1.49
RFC3-202ENST00000434425 CACTINQ8WUQ7 758 aaKnown RBP5.74□□□□□ -1.49
RFC3-202ENST00000434425 DEPDC1BQ8WUY9 529 aa5.74□□□□□ -1.49
RFC3-202ENST00000434425 CHTF18Q8WVB6 975 aa5.74□□□□□ -1.49
RFC3-202ENST00000434425 SOCS4Q8WXH5 440 aa5.74□□□□□ -1.49
RFC3-202ENST00000434425 SYN2Q92777 582 aaPredicted RBP5.74□□□□□ -1.49
RFC3-202ENST00000434425 EDC3Q96F86 508 aaKnown RBP5.74□□□□□ -1.49
RFC3-202ENST00000434425 PIWIL1Q96J94 861 aaKnown RBP5.74□□□□□ -1.49
RFC3-202ENST00000434425 CHAMP1Q96JM3 812 aa5.74□□□□□ -1.49
RFC3-202ENST00000434425 PPP1R10Q96QC0 940 aaKnown RBP5.74□□□□□ -1.49
RFC3-202ENST00000434425 SECISBP2Q96T21 854 aaKnown RBP5.74□□□□□ -1.49
RFC3-202ENST00000434425 MNTQ99583 582 aa5.74□□□□□ -1.49
RFC3-202ENST00000434425 LBHD1Q9BQE6 289 aaPredicted RBP5.74□□□□□ -1.49
RFC3-202ENST00000434425 SIKE1Q9BRV8 207 aa5.74□□□□□ -1.49
RFC3-202ENST00000434425 FUCA2Q9BTY2 467 aa5.74□□□□□ -1.49
RFC3-202ENST00000434425 NUSAP1Q9BXS6 441 aaKnown RBP5.74□□□□□ -1.49
RFC3-202ENST00000434425 TTYH1Q9H313 450 aaPredicted RBP5.74□□□□□ -1.49
RFC3-202ENST00000434425 PRDM13Q9H4Q3 707 aa5.74□□□□□ -1.49
RFC3-202ENST00000434425 TFB2MQ9H5Q4 396 aaKnown RBP5.74□□□□□ -1.49
RFC3-202ENST00000434425 RUBCNLQ9H714 662 aa5.74□□□□□ -1.49
RFC3-202ENST00000434425 SCPEP1Q9HB40 452 aa5.74□□□□□ -1.49
RFC3-202ENST00000434425 PRDM6Q9NQX0 595 aa5.74□□□□□ -1.49
RFC3-202ENST00000434425 SLC35D1Q9NTN3 355 aa5.74□□□□□ -1.49
RFC3-202ENST00000434425 HESX1Q9UBX0 185 aa5.74□□□□□ -1.49
RFC3-202ENST00000434425 REV1Q9UBZ9 1251 aa5.74□□□□□ -1.49
RFC3-202ENST00000434425 DACH1Q9UI36 760 aa5.74□□□□□ -1.49
RFC3-202ENST00000434425 CPSF3Q9UKF6 684 aaKnown RBP5.74□□□□□ -1.49
RFC3-202ENST00000434425 SIK3Q9Y2K2 1263 aa5.74□□□□□ -1.49
RFC3-202ENST00000434425 PDS5AQ29RF7 1337 aaKnown RBP5.74□□□□□ -1.49
RFC3-202ENST00000434425 COL2A1P02458 1487 aaPredicted RBP5.74□□□□□ -1.49
RFC3-202ENST00000434425 TRBV23-1A0A0A0MS06 115 aa5.73□□□□□ -1.49
RFC3-202ENST00000434425 NUDT19A8MXV4 375 aa5.73□□□□□ -1.49
RFC3-202ENST00000434425 EIF3CLB5ME19 914 aaKnown RBP5.73□□□□□ -1.49
RFC3-202ENST00000434425 HSBP1L1C9JCN9 74 aa5.73□□□□□ -1.49
RFC3-202ENST00000434425 H0YAE9 185 aa5.73□□□□□ -1.49
RFC3-202ENST00000434425 BUB1O43683 1085 aa5.73□□□□□ -1.49
RFC3-202ENST00000434425 SUSD5O60279 629 aa5.73□□□□□ -1.49
RFC3-202ENST00000434425 ZC3H11AO75152 810 aaKnown RBP eCLIP5.73□□□□□ -1.49
RFC3-202ENST00000434425 SPAG6O75602 509 aa5.73□□□□□ -1.49
RFC3-202ENST00000434425 PNPP00491 289 aa5.73□□□□□ -1.49
RFC3-202ENST00000434425 IVLP07476 585 aa5.73□□□□□ -1.49
RFC3-202ENST00000434425 THBS1P07996 1170 aa5.73□□□□□ -1.49
RFC3-202ENST00000434425 ANXA6P08133 673 aa5.73□□□□□ -1.49
RFC3-202ENST00000434425 ASNSP08243 561 aa5.73□□□□□ -1.49
RFC3-202ENST00000434425 FGF4P08620 206 aa5.73□□□□□ -1.49
RFC3-202ENST00000434425 MYL4P12829 197 aa5.73□□□□□ -1.49
RFC3-202ENST00000434425 PCSK2P16519 638 aa5.73□□□□□ -1.49
RFC3-202ENST00000434425 GLRA2P23416 452 aa5.73□□□□□ -1.49
RFC3-202ENST00000434425 MSNP26038 577 aaKnown RBP5.73□□□□□ -1.49
RFC3-202ENST00000434425 GJB2P29033 226 aa5.73□□□□□ -1.49
RFC3-202ENST00000434425 GSTT1P30711 240 aa5.73□□□□□ -1.49
RFC3-202ENST00000434425 BMI1P35226 326 aa5.73□□□□□ -1.49
RFC3-202ENST00000434425 NNMTP40261 264 aa5.73□□□□□ -1.49
RFC3-202ENST00000434425 ACADSBP45954 432 aa5.73□□□□□ -1.49
RFC3-202ENST00000434425 CBX5P45973 191 aa5.73□□□□□ -1.49
RFC3-202ENST00000434425 PMS2P54278 862 aa5.73□□□□□ -1.49
RFC3-202ENST00000434425 INHBCP55103 352 aa5.73□□□□□ -1.49
RFC3-202ENST00000434425 POLR2GP62487 172 aaKnown RBP eCLIP5.73□□□□□ -1.49
RFC3-202ENST00000434425 TUBA4AP68366 448 aa5.73□□□□□ -1.49
RFC3-202ENST00000434425 ARF5P84085 180 aa5.73□□□□□ -1.49
RFC3-202ENST00000434425 CREB5Q02930 508 aa5.73□□□□□ -1.49
RFC3-202ENST00000434425 TYRO3Q06418 890 aa5.73□□□□□ -1.49
RFC3-202ENST00000434425 RALGDSQ12967 914 aa5.73□□□□□ -1.49
RFC3-202ENST00000434425 CAMK2GQ13555 558 aaPredicted RBP5.73□□□□□ -1.49
RFC3-202ENST00000434425 STARD3Q14849 445 aa5.73□□□□□ -1.49
RFC3-202ENST00000434425 SPCS2Q15005 226 aa5.73□□□□□ -1.49
RFC3-202ENST00000434425 STK38Q15208 465 aa5.73□□□□□ -1.49
RFC3-202ENST00000434425 ME3Q16798 604 aa5.73□□□□□ -1.49
RFC3-202ENST00000434425 ZACNQ401N2 412 aa5.73□□□□□ -1.49
RFC3-202ENST00000434425 CTXN3Q4LDR2 81 aa5.73□□□□□ -1.49
RFC3-202ENST00000434425 CCDC62Q6P9F0 684 aa5.73□□□□□ -1.49
RFC3-202ENST00000434425 C16orf59Q7L2K0 433 aa5.73□□□□□ -1.49
RFC3-202ENST00000434425 NLRP9Q7RTR0 991 aa5.73□□□□□ -1.49
RFC3-202ENST00000434425 BRAPQ7Z569 592 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms