RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 SHBGP04278 402 aa22.76■■□□□ 1.23
VSX1-205ENST00000429762 CSH1P0DML2 217 aa22.76■■□□□ 1.23
VSX1-205ENST00000429762 CSH2P0DML3 217 aa22.76■■□□□ 1.23
VSX1-205ENST00000429762 IRAK1P51617 712 aa22.76■■□□□ 1.23
VSX1-205ENST00000429762 ERVFC1P60507 584 aa22.76■■□□□ 1.23
VSX1-205ENST00000429762 MORF4L2Q15014 288 aa22.76■■□□□ 1.23
VSX1-205ENST00000429762 HEATR6Q6AI08 1181 aaKnown RBP22.76■■□□□ 1.23
VSX1-205ENST00000429762 ZCCHC9Q8N567 271 aaKnown RBP22.76■■□□□ 1.23
VSX1-205ENST00000429762 C17orf80Q9BSJ5 609 aa22.76■■□□□ 1.23
VSX1-205ENST00000429762 RXFP1Q9HBX9 757 aa22.76■■□□□ 1.23
VSX1-205ENST00000429762 MPP6Q9NZW5 540 aa22.76■■□□□ 1.23
VSX1-205ENST00000429762 FNIP2Q9P278 1114 aa22.76■■□□□ 1.23
VSX1-205ENST00000429762 NFS1Q9Y697 457 aa22.76■■□□□ 1.23
VSX1-205ENST00000429762 ZNF840PA6NDX5 716 aa22.75■■□□□ 1.23
VSX1-205ENST00000429762 GRXCR1A8MXD5 290 aa22.75■■□□□ 1.23
VSX1-205ENST00000429762 E9PAM4 449 aa22.75■■□□□ 1.23
VSX1-205ENST00000429762 TGM5O43548 720 aa22.75■■□□□ 1.23
VSX1-205ENST00000429762 APOEP02649 317 aa22.75■■□□□ 1.23
VSX1-205ENST00000429762 DNAJB1P25685 340 aa22.75■■□□□ 1.23
VSX1-205ENST00000429762 SLMAPQ14BN4 828 aa22.75■■□□□ 1.23
VSX1-205ENST00000429762 PRKD1Q15139 912 aaPredicted RBP22.75■■□□□ 1.23
VSX1-205ENST00000429762 MANEALQ5VSG8 457 aa22.75■■□□□ 1.23
VSX1-205ENST00000429762 PLPP4Q5VZY2 271 aa22.75■■□□□ 1.23
VSX1-205ENST00000429762 PPIL6Q8IXY8 311 aa22.75■■□□□ 1.23
VSX1-205ENST00000429762 NAT8LQ8N9F0 302 aa22.75■■□□□ 1.23
VSX1-205ENST00000429762 HTR3CQ8WXA8 447 aa22.75■■□□□ 1.23
VSX1-205ENST00000429762 TBC1D31Q96DN5 1066 aa22.75■■□□□ 1.23
VSX1-205ENST00000429762 TCF25Q9BQ70 676 aa22.75■■□□□ 1.23
VSX1-205ENST00000429762 PABPC3Q9H361 631 aaKnown RBP22.75■■□□□ 1.23
VSX1-205ENST00000429762 ZNF334Q9HCZ1 680 aaPredicted RBP22.75■■□□□ 1.23
VSX1-205ENST00000429762 RAB6BQ9NRW1 208 aa22.75■■□□□ 1.23
VSX1-205ENST00000429762 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.75■■□□□ 1.23
VSX1-205ENST00000429762 VANGL2Q9ULK5 521 aa22.75■■□□□ 1.23
VSX1-205ENST00000429762 NUP205Q92621 2012 aa22.75■■□□□ 1.23
VSX1-205ENST00000429762 CARNS1A5YM72 827 aa22.74■■□□□ 1.23
VSX1-205ENST00000429762 TUBP50607 506 aa22.74■■□□□ 1.23
VSX1-205ENST00000429762 KCNQ1P51787 676 aa22.74■■□□□ 1.23
VSX1-205ENST00000429762 HSP90B2PQ58FF3 399 aa22.74■■□□□ 1.23
VSX1-205ENST00000429762 CEP85LQ5SZL2 805 aa22.74■■□□□ 1.23
VSX1-205ENST00000429762 TCEAL8Q8IYN2 117 aa22.74■■□□□ 1.23
VSX1-205ENST00000429762 ARL8AQ96BM9 186 aa22.74■■□□□ 1.23
VSX1-205ENST00000429762 LBHD1Q9BQE6 289 aaPredicted RBP22.74■■□□□ 1.23
VSX1-205ENST00000429762 NACA2Q9H009 215 aa22.74■■□□□ 1.23
VSX1-205ENST00000429762 PRDM16Q9HAZ2 1276 aa22.74■■□□□ 1.23
VSX1-205ENST00000429762 SAYSD1Q9NPB0 183 aa22.74■■□□□ 1.23
VSX1-205ENST00000429762 NDFIP2Q9NV92 336 aa22.74■■□□□ 1.23
VSX1-205ENST00000429762 PAK5Q9P286 719 aa22.74■■□□□ 1.23
VSX1-205ENST00000429762 HSFX1Q9UBD0 423 aa22.74■■□□□ 1.23
VSX1-205ENST00000429762 METTL18O95568 372 aa22.74■■□□□ 1.23
VSX1-205ENST00000429762 ACSL3O95573 720 aa22.74■■□□□ 1.23
VSX1-205ENST00000429762 ACTN2P35609 894 aa22.74■■□□□ 1.23
VSX1-205ENST00000429762 SLC29A2Q14542 456 aa22.74■■□□□ 1.23
VSX1-205ENST00000429762 FASTKD3Q14CZ7 662 aaKnown RBP22.74■■□□□ 1.23
VSX1-205ENST00000429762 VEPH1Q14D04 833 aa22.74■■□□□ 1.23
VSX1-205ENST00000429762 PDK1Q15118 436 aa22.74■■□□□ 1.23
VSX1-205ENST00000429762 MS4A13Q5J8X5 152 aa22.74■■□□□ 1.23
VSX1-205ENST00000429762 C9orf50Q5SZB4 431 aa22.74■■□□□ 1.23
VSX1-205ENST00000429762 RAP1GAP2Q684P5 730 aa22.74■■□□□ 1.23
VSX1-205ENST00000429762 FAM109BQ6ICB4 259 aaPredicted RBP22.74■■□□□ 1.23
VSX1-205ENST00000429762 BZW1Q7L1Q6 419 aaKnown RBP22.74■■□□□ 1.23
VSX1-205ENST00000429762 DNAJB7Q7Z6W7 309 aaPredicted RBP22.74■■□□□ 1.23
VSX1-205ENST00000429762 DPF3Q92784 378 aa22.74■■□□□ 1.23
VSX1-205ENST00000429762 P2RY11Q96G91 374 aa22.74■■□□□ 1.23
VSX1-205ENST00000429762 C9orf72Q96LT7 481 aa22.74■■□□□ 1.23
VSX1-205ENST00000429762 RBM15Q96T37 977 aaKnown RBP eCLIP22.74■■□□□ 1.23
VSX1-205ENST00000429762 ENTPD7Q9NQZ7 604 aa22.74■■□□□ 1.23
VSX1-205ENST00000429762 SHOC2Q9UQ13 582 aa22.74■■□□□ 1.23
VSX1-205ENST00000429762 SHROOM3Q8TF72 1996 aa22.73■■□□□ 1.23
VSX1-205ENST00000429762 GOLGA6L7A0A1B0GV03 622 aa22.73■■□□□ 1.23
VSX1-205ENST00000429762 C2orf78A6NCI8 922 aa22.73■■□□□ 1.23
VSX1-205ENST00000429762 HIDE1A8MVS5 230 aa22.73■■□□□ 1.23
VSX1-205ENST00000429762 HACD1B0YJ81 288 aa22.73■■□□□ 1.23
VSX1-205ENST00000429762 RIPK2O43353 540 aa22.73■■□□□ 1.23
VSX1-205ENST00000429762 COCHO43405 550 aa22.73■■□□□ 1.23
VSX1-205ENST00000429762 BMPR1AP36894 532 aa22.73■■□□□ 1.23
VSX1-205ENST00000429762 ZNF844Q08AG5 666 aa22.73■■□□□ 1.23
VSX1-205ENST00000429762 DENND2CQ68D51 928 aa22.73■■□□□ 1.23
VSX1-205ENST00000429762 SH3GL2Q99962 352 aa22.73■■□□□ 1.23
VSX1-205ENST00000429762 KLC2Q9H0B6 622 aa22.73■■□□□ 1.23
VSX1-205ENST00000429762 NINJ2Q9NZG7 142 aa22.73■■□□□ 1.23
VSX1-205ENST00000429762 LINC01553A4QN01 128 aa22.72■■□□□ 1.23
VSX1-205ENST00000429762 KCNK1O00180 336 aa22.72■■□□□ 1.23
VSX1-205ENST00000429762 RNF103O00237 685 aa22.72■■□□□ 1.23
VSX1-205ENST00000429762 PPP1R12AO14974 1030 aaPredicted RBP22.72■■□□□ 1.23
VSX1-205ENST00000429762 IGLV3-27P01718 113 aa22.72■■□□□ 1.23
VSX1-205ENST00000429762 SLC2A3P11169 496 aa22.72■■□□□ 1.23
VSX1-205ENST00000429762 GYS2P54840 703 aa22.72■■□□□ 1.23
VSX1-205ENST00000429762 MLLT6P55198 1093 aaPredicted RBP22.72■■□□□ 1.23
VSX1-205ENST00000429762 KYNUQ16719 465 aa22.72■■□□□ 1.23
VSX1-205ENST00000429762 FNBP1LQ5T0N5 605 aa22.72■■□□□ 1.23
VSX1-205ENST00000429762 ARHGAP36Q6ZRI8 547 aa22.72■■□□□ 1.23
VSX1-205ENST00000429762 PCGF5Q86SE9 256 aa22.72■■□□□ 1.23
VSX1-205ENST00000429762 ATP6V0D2Q8N8Y2 350 aa22.72■■□□□ 1.23
VSX1-205ENST00000429762 PDZD8Q8NEN9 1154 aa22.72■■□□□ 1.23
VSX1-205ENST00000429762 CEP295NLQ96MC4 621 aa22.72■■□□□ 1.23
VSX1-205ENST00000429762 KLHL5Q96PQ7 755 aa22.72■■□□□ 1.23
VSX1-205ENST00000429762 ETNK1Q9HBU6 452 aa22.72■■□□□ 1.23
VSX1-205ENST00000429762 TRPM5Q9NZQ8 1165 aa22.72■■□□□ 1.23
VSX1-205ENST00000429762 RNF40O75150 1001 aa22.72■■□□□ 1.23
VSX1-205ENST00000429762 ATP5C1P36542 298 aaKnown RBP22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms