RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 AKT1S1Q96B36 256 aa18.87■□□□□ 0.61
SHANK3-202ENST00000414786 PCDH12Q9NPG4 1184 aa18.87■□□□□ 0.61
SHANK3-202ENST00000414786 CENPXA8MT69 81 aa18.86■□□□□ 0.61
SHANK3-202ENST00000414786 BTN3A1O00481 513 aa18.86■□□□□ 0.61
SHANK3-202ENST00000414786 BCL2L1Q07817 233 aa18.86■□□□□ 0.61
SHANK3-202ENST00000414786 PKN1Q16512 942 aa18.86■□□□□ 0.61
SHANK3-202ENST00000414786 KIAA0408Q6ZU52 694 aa18.86■□□□□ 0.61
SHANK3-202ENST00000414786 MIEF2Q96C03 454 aa18.86■□□□□ 0.61
SHANK3-202ENST00000414786 CALR3Q96L12 384 aaKnown RBP18.86■□□□□ 0.61
SHANK3-202ENST00000414786 PPP1R2P1Q96PQ5 205 aa18.86■□□□□ 0.61
SHANK3-202ENST00000414786 FAM129BQ96TA1 746 aa18.86■□□□□ 0.61
SHANK3-202ENST00000414786 TM6SF2Q9BZW4 377 aa18.86■□□□□ 0.61
SHANK3-202ENST00000414786 FARP2O94887 1054 aaPredicted RBP18.86■□□□□ 0.61
SHANK3-202ENST00000414786 IFNA14P01570 189 aa18.86■□□□□ 0.61
SHANK3-202ENST00000414786 EIF4BP23588 611 aaKnown RBP18.86■□□□□ 0.61
SHANK3-202ENST00000414786 CCR1P32246 355 aa18.86■□□□□ 0.61
SHANK3-202ENST00000414786 SPOCD1Q6ZMY3 1216 aa18.86■□□□□ 0.61
SHANK3-202ENST00000414786 XPNPEP3Q9NQH7 507 aa18.86■□□□□ 0.61
SHANK3-202ENST00000414786 HSD17B3P37058 310 aa18.86■□□□□ 0.61
SHANK3-202ENST00000414786 TBCELQ5QJ74 424 aa18.86■□□□□ 0.61
SHANK3-202ENST00000414786 RERGQ96A58 199 aaPredicted RBP18.86■□□□□ 0.61
SHANK3-202ENST00000414786 SUCOQ9UBS9 1254 aaKnown RBP18.86■□□□□ 0.61
SHANK3-202ENST00000414786 ABRQ12979 859 aa18.86■□□□□ 0.61
SHANK3-202ENST00000414786 DAB2IPQ5VWQ8 1189 aa18.86■□□□□ 0.61
SHANK3-202ENST00000414786 TMEM79Q9BSE2 394 aa18.86■□□□□ 0.61
SHANK3-202ENST00000414786 PCDHA11Q9Y5I1 949 aa18.86■□□□□ 0.61
SHANK3-202ENST00000414786 CCDC154A6NI56 674 aa18.86■□□□□ 0.61
SHANK3-202ENST00000414786 OR56A5P0C7T3 313 aa18.86■□□□□ 0.61
SHANK3-202ENST00000414786 CLK3P49761 638 aaKnown RBP18.86■□□□□ 0.61
SHANK3-202ENST00000414786 SEL1L3Q68CR1 1132 aa18.86■□□□□ 0.61
SHANK3-202ENST00000414786 WBP11Q9Y2W2 641 aaKnown RBP18.86■□□□□ 0.61
SHANK3-202ENST00000414786 MCEMP1Q8IX19 187 aa18.86■□□□□ 0.61
SHANK3-202ENST00000414786 RUSC1Q9BVN2 902 aa18.86■□□□□ 0.61
SHANK3-202ENST00000414786 VIPAS39Q9H9C1 493 aa18.86■□□□□ 0.61
SHANK3-202ENST00000414786 C1orf232A0A0U1RR37 186 aa18.85■□□□□ 0.61
SHANK3-202ENST00000414786 HOXA2O43364 376 aa18.85■□□□□ 0.61
SHANK3-202ENST00000414786 ACER1Q8TDN7 264 aa18.85■□□□□ 0.61
SHANK3-202ENST00000414786 PCDHB2Q9Y5E7 798 aa18.85■□□□□ 0.61
SHANK3-202ENST00000414786 PNMA8CA0A1B0GUJ8 204 aa18.85■□□□□ 0.61
SHANK3-202ENST00000414786 BCLAF3A2AJT9 711 aaKnown RBP18.85■□□□□ 0.61
SHANK3-202ENST00000414786 BGNP21810 368 aa18.85■□□□□ 0.61
SHANK3-202ENST00000414786 SEC24CP53992 1094 aa18.85■□□□□ 0.61
SHANK3-202ENST00000414786 PRR5LQ6MZQ0 368 aa18.85■□□□□ 0.61
SHANK3-202ENST00000414786 SYT12Q8IV01 421 aa18.85■□□□□ 0.61
SHANK3-202ENST00000414786 PRSS58Q8IYP2 241 aa18.85■□□□□ 0.61
SHANK3-202ENST00000414786 EVA1BQ9NVM1 165 aa18.85■□□□□ 0.61
SHANK3-202ENST00000414786 FDX1P10109 184 aa18.85■□□□□ 0.61
SHANK3-202ENST00000414786 GALK1P51570 392 aa18.85■□□□□ 0.61
SHANK3-202ENST00000414786 TKFCQ3LXA3 575 aa18.85■□□□□ 0.61
SHANK3-202ENST00000414786 CNSTQ6PJW8 725 aa18.85■□□□□ 0.61
SHANK3-202ENST00000414786 IDI2Q9BXS1 227 aa18.85■□□□□ 0.61
SHANK3-202ENST00000414786 CAB39LQ9H9S4 337 aa18.85■□□□□ 0.61
SHANK3-202ENST00000414786 HSPA14Q0VDF9 509 aa18.85■□□□□ 0.61
SHANK3-202ENST00000414786 GFOD2Q3B7J2 385 aa18.85■□□□□ 0.61
SHANK3-202ENST00000414786 PLPP4Q5VZY2 271 aa18.85■□□□□ 0.61
SHANK3-202ENST00000414786 PROX1Q92786 737 aa18.85■□□□□ 0.61
SHANK3-202ENST00000414786 NSUN4Q96CB9 384 aaKnown RBP18.85■□□□□ 0.61
SHANK3-202ENST00000414786 A1CFQ9NQ94 594 aaKnown RBP18.85■□□□□ 0.61
SHANK3-202ENST00000414786 OSER1Q9NX31 292 aa18.85■□□□□ 0.61
SHANK3-202ENST00000414786 ALG6Q9Y672 507 aa18.85■□□□□ 0.61
SHANK3-202ENST00000414786 TOP3BO95985 862 aaKnown RBP18.85■□□□□ 0.61
SHANK3-202ENST00000414786 AGTP01019 485 aa18.85■□□□□ 0.61
SHANK3-202ENST00000414786 TBX2Q13207 712 aaPredicted RBP18.85■□□□□ 0.61
SHANK3-202ENST00000414786 PDPK2PQ6A1A2 396 aa18.85■□□□□ 0.61
SHANK3-202ENST00000414786 ACAT2Q9BWD1 397 aa18.85■□□□□ 0.61
SHANK3-202ENST00000414786 TRIM39Q9HCM9 518 aa18.85■□□□□ 0.61
SHANK3-202ENST00000414786 MARK1Q9P0L2 795 aa18.85■□□□□ 0.61
SHANK3-202ENST00000414786 PCDHB5Q9Y5E4 795 aa18.85■□□□□ 0.61
SHANK3-202ENST00000414786 WDR27A2RRH5 827 aa18.85■□□□□ 0.61
SHANK3-202ENST00000414786 LIN7AO14910 233 aaPredicted RBP18.85■□□□□ 0.61
SHANK3-202ENST00000414786 FDFT1P37268 417 aa18.85■□□□□ 0.61
SHANK3-202ENST00000414786 DSG1Q02413 1049 aa18.85■□□□□ 0.61
SHANK3-202ENST00000414786 FMR1Q06787 632 aaKnown RBP eCLIP18.85■□□□□ 0.61
SHANK3-202ENST00000414786 PTPAQ15257 358 aa18.85■□□□□ 0.61
SHANK3-202ENST00000414786 SLC18A3Q16572 532 aa18.85■□□□□ 0.61
SHANK3-202ENST00000414786 LINC00116Q8NCU8 138 aa18.85■□□□□ 0.61
SHANK3-202ENST00000414786 LRRN4Q8WUT4 740 aa18.85■□□□□ 0.61
SHANK3-202ENST00000414786 COMMD8Q9NX08 183 aa18.85■□□□□ 0.61
SHANK3-202ENST00000414786 DAPK2Q9UIK4 370 aa18.85■□□□□ 0.61
SHANK3-202ENST00000414786 TCOF1Q13428 1488 aaKnown RBP18.84■□□□□ 0.61
SHANK3-202ENST00000414786 METP08581 1390 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 DGCR6Q14129 220 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 SERPINA13PQ6UXR4 307 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 DDHD1Q8NEL9 900 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 PRRG3Q9BZD7 231 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 VAV3Q9UKW4 847 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 CES2O00748 559 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 COX7A2P14406 83 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 ATP5F1P24539 256 aaPredicted RBP18.84■□□□□ 0.61
SHANK3-202ENST00000414786 GNA13Q14344 377 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 CHST13Q8NET6 341 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 ZNF563Q8TA94 476 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 APBA2Q99767 749 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 UBE2OQ9C0C9 1292 aaKnown RBP18.84■□□□□ 0.61
SHANK3-202ENST00000414786 ABCC2Q92887 1545 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 PDHBP11177 359 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 ALG11Q2TAA5 492 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 CRTC3Q6UUV7 619 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 IL27RAQ6UWB1 636 aa18.84■□□□□ 0.61
SHANK3-202ENST00000414786 SYDE1Q6ZW31 735 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms