RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 SENP8Q96LD8 212 aa17.32■□□□□ 0.36
NUP50-203ENST00000407019 YY1AP1Q9H869 796 aa17.32■□□□□ 0.36
NUP50-203ENST00000407019 CRTAC1Q9NQ79 661 aa17.32■□□□□ 0.36
NUP50-203ENST00000407019 SLC38A7Q9NVC3 462 aa17.32■□□□□ 0.36
NUP50-203ENST00000407019 PIH1D1Q9NWS0 290 aaKnown RBP17.32■□□□□ 0.36
NUP50-203ENST00000407019 IGSF9Q9P2J2 1179 aa17.32■□□□□ 0.36
NUP50-203ENST00000407019 FCHO1O14526 889 aa17.31■□□□□ 0.36
NUP50-203ENST00000407019 NRP1O14786 923 aa17.31■□□□□ 0.36
NUP50-203ENST00000407019 RARBP10826 455 aa17.31■□□□□ 0.36
NUP50-203ENST00000407019 CALB2P22676 271 aa17.31■□□□□ 0.36
NUP50-203ENST00000407019 HOXC8P31273 242 aa17.31■□□□□ 0.36
NUP50-203ENST00000407019 ADRA1BP35368 520 aa17.31■□□□□ 0.36
NUP50-203ENST00000407019 CCL14Q16627 93 aa17.31■□□□□ 0.36
NUP50-203ENST00000407019 DBN1Q16643 649 aa17.31■□□□□ 0.36
NUP50-203ENST00000407019 FAM91A1Q658Y4 838 aa17.31■□□□□ 0.36
NUP50-203ENST00000407019 KYAT3Q6YP21 454 aaKnown RBP17.31■□□□□ 0.36
NUP50-203ENST00000407019 PDZD4Q76G19 769 aaPredicted RBP17.31■□□□□ 0.36
NUP50-203ENST00000407019 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.31■□□□□ 0.36
NUP50-203ENST00000407019 NTAN1Q96AB6 310 aa17.31■□□□□ 0.36
NUP50-203ENST00000407019 PRR11Q96HE9 360 aaPredicted RBP17.31■□□□□ 0.36
NUP50-203ENST00000407019 MIPEPQ99797 713 aa17.31■□□□□ 0.36
NUP50-203ENST00000407019 SYT15Q9BQS2 421 aa17.31■□□□□ 0.36
NUP50-203ENST00000407019 BTBD10Q9BSF8 475 aa17.31■□□□□ 0.36
NUP50-203ENST00000407019 TSPYL2Q9H2G4 693 aaPredicted RBP17.31■□□□□ 0.36
NUP50-203ENST00000407019 RNPEPL1Q9HAU8 725 aa17.31■□□□□ 0.36
NUP50-203ENST00000407019 XPNPEP3Q9NQH7 507 aa17.31■□□□□ 0.36
NUP50-203ENST00000407019 SYBUQ9NX95 663 aa17.31■□□□□ 0.36
NUP50-203ENST00000407019 SLC17A6Q9P2U8 582 aa17.31■□□□□ 0.36
NUP50-203ENST00000407019 Q9Y3F1 56 aa17.31■□□□□ 0.36
NUP50-203ENST00000407019 PEX11AO75192 247 aa17.3■□□□□ 0.36
NUP50-203ENST00000407019 FYNP06241 537 aa17.3■□□□□ 0.36
NUP50-203ENST00000407019 IGFBP6P24592 240 aaPredicted RBP17.3■□□□□ 0.36
NUP50-203ENST00000407019 DAOAP59103 153 aa17.3■□□□□ 0.36
NUP50-203ENST00000407019 CDK18Q07002 472 aa17.3■□□□□ 0.36
NUP50-203ENST00000407019 STXBP5Q5T5C0 1151 aa17.3■□□□□ 0.36
NUP50-203ENST00000407019 CES4AQ5XG92 561 aa17.3■□□□□ 0.36
NUP50-203ENST00000407019 FAM35AQ86V20 835 aa17.3■□□□□ 0.36
NUP50-203ENST00000407019 CRLF3Q8IUI8 442 aa17.3■□□□□ 0.36
NUP50-203ENST00000407019 ARID3BQ8IVW6 561 aaPredicted RBP17.3■□□□□ 0.36
NUP50-203ENST00000407019 RNF169Q8NCN4 708 aa17.3■□□□□ 0.36
NUP50-203ENST00000407019 CACNG4Q9UBN1 327 aa17.3■□□□□ 0.36
NUP50-203ENST00000407019 RAD54BQ9Y620 910 aa17.3■□□□□ 0.36
NUP50-203ENST00000407019 C9IYK1 514 aa17.3■□□□□ 0.36
NUP50-203ENST00000407019 DIAPH2O60879 1101 aa17.3■□□□□ 0.36
NUP50-203ENST00000407019 GLRA3O75311 464 aa17.3■□□□□ 0.36
NUP50-203ENST00000407019 AP1G2O75843 785 aa17.3■□□□□ 0.36
NUP50-203ENST00000407019 LHX1P48742 406 aa17.3■□□□□ 0.36
NUP50-203ENST00000407019 GJA9P57773 515 aa17.3■□□□□ 0.36
NUP50-203ENST00000407019 SCAPQ12770 1279 aa17.3■□□□□ 0.36
NUP50-203ENST00000407019 FSCN1Q16658 493 aaKnown RBP17.3■□□□□ 0.36
NUP50-203ENST00000407019 TAF2Q6P1X5 1199 aa17.3■□□□□ 0.36
NUP50-203ENST00000407019 PID1Q7Z2X4 250 aa17.3■□□□□ 0.36
NUP50-203ENST00000407019 RASSF3Q86WH2 238 aa17.3■□□□□ 0.36
NUP50-203ENST00000407019 TMEM86AQ8N2M4 240 aa17.3■□□□□ 0.36
NUP50-203ENST00000407019 RSRC1Q96IZ7 334 aaKnown RBP17.3■□□□□ 0.36
NUP50-203ENST00000407019 CADM1Q9BY67 442 aaKnown RBP17.3■□□□□ 0.36
NUP50-203ENST00000407019 WWP1Q9H0M0 922 aa17.3■□□□□ 0.36
NUP50-203ENST00000407019 CNGB3Q9NQW8 809 aa17.3■□□□□ 0.36
NUP50-203ENST00000407019 KLHL8Q9P2G9 620 aaPredicted RBP17.3■□□□□ 0.36
NUP50-203ENST00000407019 TSC2P49815 1807 aa17.3■□□□□ 0.36
NUP50-203ENST00000407019 TRIP12Q14669 1992 aaPredicted RBP17.29■□□□□ 0.36
NUP50-203ENST00000407019 YJEFN3A6XGL0 299 aa17.29■□□□□ 0.36
NUP50-203ENST00000407019 E7ENQ6 273 aa17.29■□□□□ 0.36
NUP50-203ENST00000407019 FAM72CH0Y354 149 aa17.29■□□□□ 0.36
NUP50-203ENST00000407019 M0QZ92 97 aa17.29■□□□□ 0.36
NUP50-203ENST00000407019 TPP1O14773 563 aa17.29■□□□□ 0.36
NUP50-203ENST00000407019 SNNO75324 88 aaPredicted RBP17.29■□□□□ 0.36
NUP50-203ENST00000407019 CELF2O95319 508 aaKnown RBP17.29■□□□□ 0.36
NUP50-203ENST00000407019 TOP3BO95985 862 aaKnown RBP17.29■□□□□ 0.36
NUP50-203ENST00000407019 ERCC2P18074 760 aa17.29■□□□□ 0.36
NUP50-203ENST00000407019 ELF1P32519 619 aa17.29■□□□□ 0.36
NUP50-203ENST00000407019 MLH1P40692 756 aa17.29■□□□□ 0.36
NUP50-203ENST00000407019 TPI1P60174 286 aa17.29■□□□□ 0.36
NUP50-203ENST00000407019 STX3Q13277 289 aa17.29■□□□□ 0.36
NUP50-203ENST00000407019 FAM72AQ5TYM5 149 aa17.29■□□□□ 0.36
NUP50-203ENST00000407019 FAM72DQ6L9T8 149 aa17.29■□□□□ 0.36
NUP50-203ENST00000407019 TTC7BQ86TV6 843 aa17.29■□□□□ 0.36
NUP50-203ENST00000407019 ALYREFQ86V81 257 aaKnown RBP17.29■□□□□ 0.36
NUP50-203ENST00000407019 FAM72BQ86X60 149 aa17.29■□□□□ 0.36
NUP50-203ENST00000407019 TP53INP2Q8IXH6 220 aa17.29■□□□□ 0.36
NUP50-203ENST00000407019 ADAM32Q8TC27 787 aa17.29■□□□□ 0.36
NUP50-203ENST00000407019 SH3TC2Q8TF17 1288 aa17.29■□□□□ 0.36
NUP50-203ENST00000407019 SMOQ99835 787 aa17.29■□□□□ 0.36
NUP50-203ENST00000407019 NMUR2Q9GZQ4 415 aa17.29■□□□□ 0.36
NUP50-203ENST00000407019 WDR6Q9NNW5 1121 aaKnown RBP17.29■□□□□ 0.36
NUP50-203ENST00000407019 MEIS3P2A8K0S8 358 aa17.28■□□□□ 0.36
NUP50-203ENST00000407019 GYG2O15488 501 aa17.28■□□□□ 0.36
NUP50-203ENST00000407019 ALDOAP04075 364 aaKnown RBP17.28■□□□□ 0.36
NUP50-203ENST00000407019 POLBP06746 335 aa17.28■□□□□ 0.36
NUP50-203ENST00000407019 RPSAP08865 295 aaKnown RBP17.28■□□□□ 0.36
NUP50-203ENST00000407019 ESRRAP11474 423 aaPredicted RBP17.28■□□□□ 0.36
NUP50-203ENST00000407019 GM2AP17900 193 aa17.28■□□□□ 0.36
NUP50-203ENST00000407019 CYP2B6P20813 491 aa17.28■□□□□ 0.36
NUP50-203ENST00000407019 RABGGTBP53611 331 aa17.28■□□□□ 0.36
NUP50-203ENST00000407019 MRPS6P82932 125 aaKnown RBP17.28■□□□□ 0.36
NUP50-203ENST00000407019 PURAQ00577 322 aaKnown RBP17.28■□□□□ 0.36
NUP50-203ENST00000407019 SEMA3BQ13214 749 aa17.28■□□□□ 0.36
NUP50-203ENST00000407019 GPRIN1Q7Z2K8 1008 aa17.28■□□□□ 0.36
NUP50-203ENST00000407019 N4BP2L2Q92802 583 aaPredicted RBP17.28■□□□□ 0.36
NUP50-203ENST00000407019 PCED1BQ96HM7 432 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms