RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 TMEM110Q86TL2 294 aa14.4□□□□□ -0.1
SCAF4-202ENST00000399804 NIPA2Q8N8Q9 360 aa14.4□□□□□ -0.1
SCAF4-202ENST00000399804 CD101Q93033 1021 aa14.4□□□□□ -0.1
SCAF4-202ENST00000399804 P2RY11Q96G91 374 aa14.4□□□□□ -0.1
SCAF4-202ENST00000399804 SH3GL2Q99962 352 aa14.4□□□□□ -0.1
SCAF4-202ENST00000399804 SLC4A5Q9BY07 1137 aa14.4□□□□□ -0.1
SCAF4-202ENST00000399804 YJEFN3A6XGL0 299 aa14.4□□□□□ -0.1
SCAF4-202ENST00000399804 ZBTB42B2RXF5 422 aa14.4□□□□□ -0.1
SCAF4-202ENST00000399804 E7ENQ6 273 aa14.4□□□□□ -0.1
SCAF4-202ENST00000399804 SLC10A3P09131 477 aa14.4□□□□□ -0.1
SCAF4-202ENST00000399804 KCNE1P15382 129 aa14.4□□□□□ -0.1
SCAF4-202ENST00000399804 TUFMP49411 452 aaKnown RBP14.4□□□□□ -0.1
SCAF4-202ENST00000399804 RENBPP51606 427 aa14.4□□□□□ -0.1
SCAF4-202ENST00000399804 INCA1Q0VD86 236 aa14.4□□□□□ -0.1
SCAF4-202ENST00000399804 MPP3Q13368 585 aa14.4□□□□□ -0.1
SCAF4-202ENST00000399804 CDH18Q13634 790 aa14.4□□□□□ -0.1
SCAF4-202ENST00000399804 FASTKD3Q14CZ7 662 aaKnown RBP14.4□□□□□ -0.1
SCAF4-202ENST00000399804 TSNAXIP1Q2TAA8 658 aa14.4□□□□□ -0.1
SCAF4-202ENST00000399804 INTS6LQ5JSJ4 861 aaKnown RBP14.4□□□□□ -0.1
SCAF4-202ENST00000399804 LRRC8DQ7L1W4 858 aa14.4□□□□□ -0.1
SCAF4-202ENST00000399804 IFNLR1Q8IU57 520 aaPredicted RBP14.4□□□□□ -0.1
SCAF4-202ENST00000399804 PCDH19Q8TAB3 1148 aa14.4□□□□□ -0.1
SCAF4-202ENST00000399804 TMEM40Q8WWA1 233 aa14.4□□□□□ -0.1
SCAF4-202ENST00000399804 CPT1BQ92523 772 aa14.4□□□□□ -0.1
SCAF4-202ENST00000399804 MTBPQ96DY7 904 aa14.4□□□□□ -0.1
SCAF4-202ENST00000399804 SGF29Q96ES7 293 aa14.4□□□□□ -0.1
SCAF4-202ENST00000399804 PPP1R36Q96LQ0 422 aa14.4□□□□□ -0.1
SCAF4-202ENST00000399804 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.4□□□□□ -0.1
SCAF4-202ENST00000399804 SPECC1L-ADORA2AF8WAN1 911 aa14.4□□□□□ -0.1
SCAF4-202ENST00000399804 GOLGA8TH3BQL2 631 aa14.4□□□□□ -0.1
SCAF4-202ENST00000399804 PAX3P23760 479 aa14.4□□□□□ -0.1
SCAF4-202ENST00000399804 CDH17Q12864 832 aa14.4□□□□□ -0.1
SCAF4-202ENST00000399804 ELMSAN1Q6PJG2 1045 aa14.4□□□□□ -0.1
SCAF4-202ENST00000399804 FUKQ8N0W3 1084 aa14.4□□□□□ -0.1
SCAF4-202ENST00000399804 WDTC1Q8N5D0 677 aa14.4□□□□□ -0.1
SCAF4-202ENST00000399804 ANKRD31Q8N7Z5 1873 aa14.4□□□□□ -0.1
SCAF4-202ENST00000399804 CMASQ8NFW8 434 aaPredicted RBP14.4□□□□□ -0.1
SCAF4-202ENST00000399804 OR52K1Q8NGK4 314 aa14.4□□□□□ -0.1
SCAF4-202ENST00000399804 CALML6Q8TD86 181 aa14.4□□□□□ -0.1
SCAF4-202ENST00000399804 MRPS31Q92665 395 aaKnown RBP14.4□□□□□ -0.1
SCAF4-202ENST00000399804 LRRC39Q96DD0 335 aa14.4□□□□□ -0.1
SCAF4-202ENST00000399804 CINPQ9BW66 212 aaPredicted RBP14.4□□□□□ -0.1
SCAF4-202ENST00000399804 MDM4O15151 490 aa14.39□□□□□ -0.11
SCAF4-202ENST00000399804 MSI1O43347 362 aaKnown RBP14.39□□□□□ -0.11
SCAF4-202ENST00000399804 GJA9P57773 515 aa14.39□□□□□ -0.11
SCAF4-202ENST00000399804 RAD51Q06609 339 aa14.39□□□□□ -0.11
SCAF4-202ENST00000399804 RABGAP1LQ5R372 815 aa14.39□□□□□ -0.11
SCAF4-202ENST00000399804 SLC35F5Q8WV83 523 aa14.39□□□□□ -0.11
SCAF4-202ENST00000399804 USP6NLQ92738 828 aa14.39□□□□□ -0.11
SCAF4-202ENST00000399804 KCTD15Q96SI1 283 aaPredicted RBP14.39□□□□□ -0.11
SCAF4-202ENST00000399804 ACBD6Q9BR61 282 aa14.39□□□□□ -0.11
SCAF4-202ENST00000399804 HIPK3Q9H422 1215 aa14.39□□□□□ -0.11
SCAF4-202ENST00000399804 ZDHHC18Q9NUE0 388 aa14.39□□□□□ -0.11
SCAF4-202ENST00000399804 MYADML2A6NDP7 307 aa14.39□□□□□ -0.11
SCAF4-202ENST00000399804 ZNF135P52742 658 aaPredicted RBP14.39□□□□□ -0.11
SCAF4-202ENST00000399804 CDK16Q00536 496 aa14.39□□□□□ -0.11
SCAF4-202ENST00000399804 ANKRD22Q5VYY1 191 aa14.39□□□□□ -0.11
SCAF4-202ENST00000399804 KAT2BQ92831 832 aa14.39□□□□□ -0.11
SCAF4-202ENST00000399804 FCRL2Q96LA5 508 aaPredicted RBP14.39□□□□□ -0.11
SCAF4-202ENST00000399804 SYT11Q9BT88 431 aa14.39□□□□□ -0.11
SCAF4-202ENST00000399804 OLA1Q9NTK5 396 aaKnown RBP14.39□□□□□ -0.11
SCAF4-202ENST00000399804 NSMCE4AQ9NXX6 385 aa14.39□□□□□ -0.11
SCAF4-202ENST00000399804 FLRT1Q9NZU1 646 aa14.39□□□□□ -0.11
SCAF4-202ENST00000399804 CPSF2Q9P2I0 782 aaKnown RBP14.39□□□□□ -0.11
SCAF4-202ENST00000399804 MYH9P35579 1960 aaKnown RBP14.39□□□□□ -0.11
SCAF4-202ENST00000399804 CBX4O00257 560 aa14.39□□□□□ -0.11
SCAF4-202ENST00000399804 GPR32O75388 356 aa14.39□□□□□ -0.11
SCAF4-202ENST00000399804 GDF10P55107 478 aa14.39□□□□□ -0.11
SCAF4-202ENST00000399804 CST9Q5W186 159 aa14.39□□□□□ -0.11
SCAF4-202ENST00000399804 PRCCQ92733 491 aaPredicted RBP14.39□□□□□ -0.11
SCAF4-202ENST00000399804 VAT1Q99536 393 aa14.39□□□□□ -0.11
SCAF4-202ENST00000399804 FAM96AQ9H5X1 160 aa14.39□□□□□ -0.11
SCAF4-202ENST00000399804 A0A0U1RQF3 1178 aa14.39□□□□□ -0.11
SCAF4-202ENST00000399804 RBM47A0AV96 593 aaKnown RBP14.39□□□□□ -0.11
SCAF4-202ENST00000399804 MOXD2PA6NHM9 499 aa14.39□□□□□ -0.11
SCAF4-202ENST00000399804 SCAMP3O14828 347 aaKnown RBP14.39□□□□□ -0.11
SCAF4-202ENST00000399804 NDUFS3O75489 264 aa14.39□□□□□ -0.11
SCAF4-202ENST00000399804 ABHD2P08910 425 aa14.39□□□□□ -0.11
SCAF4-202ENST00000399804 CYP2C18P33260 490 aa14.39□□□□□ -0.11
SCAF4-202ENST00000399804 NRLP54845 237 aa14.39□□□□□ -0.11
SCAF4-202ENST00000399804 ALDH18A1P54886 795 aaKnown RBP14.39□□□□□ -0.11
SCAF4-202ENST00000399804 DUSP4Q13115 394 aa14.39□□□□□ -0.11
SCAF4-202ENST00000399804 SLC12A1Q13621 1099 aa14.39□□□□□ -0.11
SCAF4-202ENST00000399804 NAA25Q14CX7 972 aa14.39□□□□□ -0.11
SCAF4-202ENST00000399804 TCEAL1Q15170 157 aa14.39□□□□□ -0.11
SCAF4-202ENST00000399804 ACAD11Q709F0 780 aa14.39□□□□□ -0.11
SCAF4-202ENST00000399804 PRDM16Q9HAZ2 1276 aa14.39□□□□□ -0.11
SCAF4-202ENST00000399804 H0Y3Z8 333 aa14.38□□□□□ -0.11
SCAF4-202ENST00000399804 ADCY6O43306 1168 aa14.38□□□□□ -0.11
SCAF4-202ENST00000399804 TSPAN3O60637 253 aa14.38□□□□□ -0.11
SCAF4-202ENST00000399804 ADRA1DP25100 572 aa14.38□□□□□ -0.11
SCAF4-202ENST00000399804 KPNA1P52294 538 aaPredicted RBP14.38□□□□□ -0.11
SCAF4-202ENST00000399804 EPHB3P54753 998 aa14.38□□□□□ -0.11
SCAF4-202ENST00000399804 OXCT1P55809 520 aa14.38□□□□□ -0.11
SCAF4-202ENST00000399804 DAOAP59103 153 aa14.38□□□□□ -0.11
SCAF4-202ENST00000399804 OCRLQ01968 901 aa14.38□□□□□ -0.11
SCAF4-202ENST00000399804 TRIM32Q13049 653 aa14.38□□□□□ -0.11
SCAF4-202ENST00000399804 POLD3Q15054 466 aaPredicted RBP14.38□□□□□ -0.11
SCAF4-202ENST00000399804 RAP1GAP2Q684P5 730 aa14.38□□□□□ -0.11
SCAF4-202ENST00000399804 MON1AQ86VX9 555 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms