RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 TRPV2Q9Y5S1 764 aa5.26□□□□□ -1.57
GABPB1-204ENST00000396464 FPGT-TNNI3KV9GXZ4 949 aa5.26□□□□□ -1.57
GABPB1-204ENST00000396464 MYBBP1AQ9BQG0 1328 aaKnown RBP5.26□□□□□ -1.57
GABPB1-204ENST00000396464 hCG_1809904A0A1W2PP81 198 aa5.25□□□□□ -1.57
GABPB1-204ENST00000396464 A0A1W2PPE2 198 aa5.25□□□□□ -1.57
GABPB1-204ENST00000396464 A0A1W2PR64 198 aa5.25□□□□□ -1.57
GABPB1-204ENST00000396464 TMEM232C9JQI7 657 aa5.25□□□□□ -1.57
GABPB1-204ENST00000396464 RIPK2O43353 540 aa5.25□□□□□ -1.57
GABPB1-204ENST00000396464 NRP2O60462 931 aa5.25□□□□□ -1.57
GABPB1-204ENST00000396464 B4GALT4O60513 344 aa5.25□□□□□ -1.57
GABPB1-204ENST00000396464 FZD7O75084 574 aa5.25□□□□□ -1.57
GABPB1-204ENST00000396464 PALMO75781 387 aa5.25□□□□□ -1.57
GABPB1-204ENST00000396464 PSMD10O75832 226 aa5.25□□□□□ -1.57
GABPB1-204ENST00000396464 BBOX1O75936 387 aa5.25□□□□□ -1.57
GABPB1-204ENST00000396464 PDHA1P08559 390 aa5.25□□□□□ -1.57
GABPB1-204ENST00000396464 PTAFRP25105 342 aa5.25□□□□□ -1.57
GABPB1-204ENST00000396464 ECHS1P30084 290 aa5.25□□□□□ -1.57
GABPB1-204ENST00000396464 BMPR1AP36894 532 aa5.25□□□□□ -1.57
GABPB1-204ENST00000396464 POLGP54098 1239 aaPredicted RBP5.25□□□□□ -1.57
GABPB1-204ENST00000396464 EIF4A1P60842 406 aaKnown RBP5.25□□□□□ -1.57
GABPB1-204ENST00000396464 ICAM4Q14773 271 aa5.25□□□□□ -1.57
GABPB1-204ENST00000396464 C9orf152Q5JTZ5 239 aa5.25□□□□□ -1.57
GABPB1-204ENST00000396464 ZNF585AQ6P3V2 769 aa5.25□□□□□ -1.57
GABPB1-204ENST00000396464 TEPPQ6URK8 271 aa5.25□□□□□ -1.57
GABPB1-204ENST00000396464 MEX3BQ6ZN04 569 aaKnown RBP5.25□□□□□ -1.57
GABPB1-204ENST00000396464 PLEKHM3Q6ZWE6 761 aa5.25□□□□□ -1.57
GABPB1-204ENST00000396464 LPCAT2Q7L5N7 544 aa5.25□□□□□ -1.57
GABPB1-204ENST00000396464 RASGRP3Q8IV61 690 aa5.25□□□□□ -1.57
GABPB1-204ENST00000396464 IQCF2Q8IXL9 164 aa5.25□□□□□ -1.57
GABPB1-204ENST00000396464 PEX5LQ8IYB4 626 aa5.25□□□□□ -1.57
GABPB1-204ENST00000396464 CTCFLQ8NI51 663 aaPredicted RBP5.25□□□□□ -1.57
GABPB1-204ENST00000396464 KIF18AQ8NI77 898 aa5.25□□□□□ -1.57
GABPB1-204ENST00000396464 CTNNBL1Q8WYA6 563 aaPredicted RBP5.25□□□□□ -1.57
GABPB1-204ENST00000396464 PDLIM5Q96HC4 596 aaKnown RBP5.25□□□□□ -1.57
GABPB1-204ENST00000396464 CCDC114Q96M63 670 aa5.25□□□□□ -1.57
GABPB1-204ENST00000396464 MRIQ9BWK5 157 aa5.25□□□□□ -1.57
GABPB1-204ENST00000396464 SSBP3Q9BWW4 388 aaPredicted RBP5.25□□□□□ -1.57
GABPB1-204ENST00000396464 REXO4Q9GZR2 422 aaKnown RBP5.25□□□□□ -1.57
GABPB1-204ENST00000396464 DNAJC18Q9H819 358 aa5.25□□□□□ -1.57
GABPB1-204ENST00000396464 SEMA4BQ9NPR2 832 aaPredicted RBP5.25□□□□□ -1.57
GABPB1-204ENST00000396464 SIRT3Q9NTG7 399 aaPredicted RBP5.25□□□□□ -1.57
GABPB1-204ENST00000396464 UCKL1Q9NWZ5 548 aa5.25□□□□□ -1.57
GABPB1-204ENST00000396464 DDX43Q9NXZ2 648 aaKnown RBP5.25□□□□□ -1.57
GABPB1-204ENST00000396464 LIMA1Q9UHB6 759 aaKnown RBP5.25□□□□□ -1.57
GABPB1-204ENST00000396464 CNTN6Q9UQ52 1028 aa5.25□□□□□ -1.57
GABPB1-204ENST00000396464 TBC1D30Q9Y2I9 924 aa5.25□□□□□ -1.57
GABPB1-204ENST00000396464 KIF3AQ9Y496 699 aa5.25□□□□□ -1.57
GABPB1-204ENST00000396464 KCNE2Q9Y6J6 123 aa5.25□□□□□ -1.57
GABPB1-204ENST00000396464 A0A0A6YYJ9 748 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 GLOD5A6NK44 160 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 H0Y858 1186 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 J3KTA2 159 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 AP3B1O00203 1094 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 CACNB4O00305 520 aaPredicted RBP5.24□□□□□ -1.57
GABPB1-204ENST00000396464 CYR61O00622 381 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 STX6O43752 255 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 NOL3O60936 208 aaKnown RBP5.24□□□□□ -1.57
GABPB1-204ENST00000396464 GUCY1B2O75343 617 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 BCAS2O75934 225 aaPredicted RBP5.24□□□□□ -1.57
GABPB1-204ENST00000396464 GCNT3O95395 438 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 CD1AP06126 327 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 HMOX1P09601 288 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 SUPT20HL2P0C7V6 817 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 GZMAP12544 262 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 FERP16591 822 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 PSMC4P43686 418 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 LMAN1P49257 510 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 SLC11A2P49281 568 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 NT5C2P49902 561 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 NRG3P56975 720 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 EIF2B5Q13144 721 aaKnown RBP5.24□□□□□ -1.57
GABPB1-204ENST00000396464 SLC29A2Q14542 456 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 ZKSCAN8Q15776 578 aaPredicted RBP5.24□□□□□ -1.57
GABPB1-204ENST00000396464 NTRK2Q16620 822 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 MST1LQ2TV78 715 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 SUPT20HL1Q3ZLR7 823 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 CEP55Q53EZ4 464 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 TOR1AIP1Q5JTV8 583 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 GLRA4Q5JXX5 417 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 TTC39AQ5SRH9 613 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 LIPMQ5VYY2 423 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 DGAT2L7PQ6IED9 249 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 NCEH1Q6PIU2 408 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 FAM111BQ6SJ93 734 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 ZDHHC24Q6UX98 284 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 TMC5Q6UXY8 1006 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.24□□□□□ -1.57
GABPB1-204ENST00000396464 ADGRG6Q86SQ4 1221 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 DNAAF5Q86Y56 855 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 CCDC105Q8IYK2 499 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 KLHL36Q8N4N3 616 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 POC5Q8NA72 575 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 IGDCC4Q8TDY8 1250 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 CLEC4DQ8WXI8 215 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 MRPS27Q92552 414 aaKnown RBP5.24□□□□□ -1.57
GABPB1-204ENST00000396464 RBM17Q96I25 401 aaKnown RBP5.24□□□□□ -1.57
GABPB1-204ENST00000396464 HIST1H2AHQ96KK5 128 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 HIST1H2AJQ99878 128 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 HTATIP2Q9BUP3 242 aa5.24□□□□□ -1.57
GABPB1-204ENST00000396464 FAM129AQ9BZQ8 928 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms