RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 EIF4A1P60842 406 aaKnown RBP6.34□□□□□ -1.39
RNU4-39P-201ENST00000362455 SLC4A8Q2Y0W8 1093 aa6.34□□□□□ -1.39
RNU4-39P-201ENST00000362455 ZNF618Q5T7W0 954 aa6.34□□□□□ -1.39
RNU4-39P-201ENST00000362455 LCE3BQ5TA77 95 aa6.34□□□□□ -1.39
RNU4-39P-201ENST00000362455 DPY19L3Q6ZPD9 716 aa6.34□□□□□ -1.39
RNU4-39P-201ENST00000362455 PIK3AP1Q6ZUJ8 805 aa6.34□□□□□ -1.39
RNU4-39P-201ENST00000362455 RHOUQ7L0Q8 258 aa6.34□□□□□ -1.39
RNU4-39P-201ENST00000362455 TRABD2AQ86V40 505 aa6.34□□□□□ -1.39
RNU4-39P-201ENST00000362455 RAB11FIP4Q86YS3 637 aa6.34□□□□□ -1.39
RNU4-39P-201ENST00000362455 XAGE5Q8WWM1 108 aa6.34□□□□□ -1.39
RNU4-39P-201ENST00000362455 ASB12Q8WXK4 309 aa6.34□□□□□ -1.39
RNU4-39P-201ENST00000362455 SDCCAG3Q96C92 435 aa6.34□□□□□ -1.39
RNU4-39P-201ENST00000362455 RSPRY1Q96DX4 576 aa6.34□□□□□ -1.39
RNU4-39P-201ENST00000362455 MCRS1Q96EZ8 462 aa6.34□□□□□ -1.39
RNU4-39P-201ENST00000362455 WDYHV1Q96HA8 205 aa6.34□□□□□ -1.39
RNU4-39P-201ENST00000362455 TTPALQ9BTX7 342 aa6.34□□□□□ -1.39
RNU4-39P-201ENST00000362455 NRDE2Q9H7Z3 1164 aa6.34□□□□□ -1.39
RNU4-39P-201ENST00000362455 KLC4Q9NSK0 619 aa6.34□□□□□ -1.39
RNU4-39P-201ENST00000362455 CRYL1Q9Y2S2 319 aa6.34□□□□□ -1.39
RNU4-39P-201ENST00000362455 TSC22D4Q9Y3Q8 395 aa6.34□□□□□ -1.39
RNU4-39P-201ENST00000362455 PXDNLA1KZ92 1463 aa6.34□□□□□ -1.4
RNU4-39P-201ENST00000362455 NCAPD2Q15021 1401 aa6.33□□□□□ -1.4
RNU4-39P-201ENST00000362455 KIAA0355O15063 1070 aa6.33□□□□□ -1.4
RNU4-39P-201ENST00000362455 TOMM70O94826 608 aa6.33□□□□□ -1.4
RNU4-39P-201ENST00000362455 TK1P04183 234 aa6.33□□□□□ -1.4
RNU4-39P-201ENST00000362455 PTGS2P35354 604 aa6.33□□□□□ -1.4
RNU4-39P-201ENST00000362455 GSTM5P46439 218 aa6.33□□□□□ -1.4
RNU4-39P-201ENST00000362455 SEC24CP53992 1094 aa6.33□□□□□ -1.4
RNU4-39P-201ENST00000362455 ACTR2P61160 394 aa6.33□□□□□ -1.4
RNU4-39P-201ENST00000362455 EFR3AQ14156 821 aa6.33□□□□□ -1.4
RNU4-39P-201ENST00000362455 RPS6KA2Q15349 733 aa6.33□□□□□ -1.4
RNU4-39P-201ENST00000362455 ST3GAL2Q16842 350 aa6.33□□□□□ -1.4
RNU4-39P-201ENST00000362455 CPOQ8IVL8 374 aa6.33□□□□□ -1.4
RNU4-39P-201ENST00000362455 HAS1Q92839 578 aa6.33□□□□□ -1.4
RNU4-39P-201ENST00000362455 FBXL20Q96IG2 436 aa6.33□□□□□ -1.4
RNU4-39P-201ENST00000362455 Q96MF0 132 aa6.33□□□□□ -1.4
RNU4-39P-201ENST00000362455 AIFM2Q9BRQ8 373 aa6.33□□□□□ -1.4
RNU4-39P-201ENST00000362455 ALG8Q9BVK2 526 aa6.33□□□□□ -1.4
RNU4-39P-201ENST00000362455 DPCDQ9BVM2 203 aaPredicted RBP6.33□□□□□ -1.4
RNU4-39P-201ENST00000362455 C1QTNF3Q9BXJ4 246 aa6.33□□□□□ -1.4
RNU4-39P-201ENST00000362455 TWSG1Q9GZX9 223 aa6.33□□□□□ -1.4
RNU4-39P-201ENST00000362455 PRDM16Q9HAZ2 1276 aa6.33□□□□□ -1.4
RNU4-39P-201ENST00000362455 EHD3Q9NZN3 535 aa6.33□□□□□ -1.4
RNU4-39P-201ENST00000362455 NFU1Q9UMS0 254 aa6.33□□□□□ -1.4
RNU4-39P-201ENST00000362455 TUBGCP6Q96RT7 1819 aa6.33□□□□□ -1.4
RNU4-39P-201ENST00000362455 LY75O60449 1722 aa6.33□□□□□ -1.4
RNU4-39P-201ENST00000362455 CHD4Q14839 1912 aa6.33□□□□□ -1.4
RNU4-39P-201ENST00000362455 FLT4P35916 1363 aa6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 TONSLQ96HA7 1378 aa6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 PIPSLA2A3N6 862 aa6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 WDR27A2RRH5 827 aa6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 EFCAB8A8MWE9 144 aa6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 TISP43B9A030 160 aa6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 E7EVH7 732 aa6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 CTIFO43310 598 aaKnown RBP6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 SPRY2O43597 315 aa6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 KRT38O76015 456 aa6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 RXRAP19793 462 aa6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 PRELPP51888 382 aa6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 TGFB2P61812 414 aa6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 DGCR2P98153 550 aa6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 SF3A3Q12874 501 aaKnown RBP eCLIP6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 PTPRRQ15256 657 aa6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 CYP1B1Q16678 543 aa6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 GALNTL6Q49A17 601 aa6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 AASDHQ4L235 1098 aaPredicted RBP6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 ABHD17BQ5VST6 288 aa6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 FAM90A2PQ658T7 463 aa6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 GRHL2Q6ISB3 625 aa6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 CCDC144NLQ6NUI1 221 aa6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 KCNV1Q6PIU1 500 aa6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 NAXEQ8NCW5 288 aa6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 SLC22A17Q8WUG5 538 aa6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 HMGB4Q8WW32 186 aa6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 HERVK_113Q902F9 699 aa6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 CPT1BQ92523 772 aa6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 GOLGA1Q92805 767 aa6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 COG8Q96MW5 612 aa6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 EIF3CQ99613 913 aaKnown RBP6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 PAAF1Q9BRP4 392 aa6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 MECRQ9BV79 373 aa6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 MLST8Q9BVC4 326 aa6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 WDR11Q9BZH6 1224 aa6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 SERHL2Q9H4I8 314 aa6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 G6PC2Q9NQR9 355 aa6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 SLC2A4RGQ9NR83 387 aa6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 NDUFAF4Q9P032 175 aa6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 IFT80Q9P2H3 777 aaPredicted RBP6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 POLKQ9UBT6 870 aa6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 SH2B3Q9UQQ2 575 aa6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 QSER1Q2KHR3 1735 aa6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 TOGARAM1Q9Y4F4 1720 aa6.32□□□□□ -1.4
RNU4-39P-201ENST00000362455 KDRP35968 1356 aa6.31□□□□□ -1.4
RNU4-39P-201ENST00000362455 DOT1LQ8TEK3 1739 aa6.31□□□□□ -1.4
RNU4-39P-201ENST00000362455 GXYLT2A0PJZ3 443 aa6.31□□□□□ -1.4
RNU4-39P-201ENST00000362455 A8MVJ9 347 aa6.31□□□□□ -1.4
RNU4-39P-201ENST00000362455 PEX1O43933 1283 aa6.31□□□□□ -1.4
RNU4-39P-201ENST00000362455 PMPCBO75439 489 aa6.31□□□□□ -1.4
RNU4-39P-201ENST00000362455 NXPH3O95157 252 aa6.31□□□□□ -1.4
RNU4-39P-201ENST00000362455 ONECUT2O95948 504 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms