RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 MVKQ03426 396 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 PPFIA1Q13136 1202 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 BMT2Q1RMZ1 405 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 ZNF423Q2M1K9 1284 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 TTC31Q49AM3 519 aaPredicted RBP5.84□□□□□ -1.47
CD47-201ENST00000355354 RNASEH2BQ5TBB1 312 aaKnown RBP5.84□□□□□ -1.47
CD47-201ENST00000355354 ZNF564Q8TBZ8 553 aaPredicted RBP5.84□□□□□ -1.47
CD47-201ENST00000355354 PHOSPHO2Q8TCD6 241 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 DCAKDQ8WVC6 231 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 CYTH2Q99418 400 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 FDXACB1Q9BRP7 624 aaPredicted RBP5.84□□□□□ -1.47
CD47-201ENST00000355354 EBF3Q9H4W6 596 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 TBC1D22BQ9NU19 505 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 EXD2Q9NVH0 621 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 NMRK1Q9NWW6 199 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.84□□□□□ -1.47
CD47-201ENST00000355354 DTLQ9NZJ0 730 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 CTTNBP2NLQ9P2B4 639 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 FEM1BQ9UK73 627 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 APPL1Q9UKG1 709 aa5.84□□□□□ -1.47
CD47-201ENST00000355354 DNMT3AQ9Y6K1 912 aaPredicted RBP5.84□□□□□ -1.47
CD47-201ENST00000355354 K7ENM7 598 aa5.84□□□□□ -1.48
CD47-201ENST00000355354 TREHO43280 583 aa5.84□□□□□ -1.48
CD47-201ENST00000355354 HLA-DRAP01903 254 aa5.84□□□□□ -1.48
CD47-201ENST00000355354 VIMP08670 466 aaKnown RBP5.84□□□□□ -1.48
CD47-201ENST00000355354 UBTFL6P0CB48 400 aaPredicted RBP5.84□□□□□ -1.48
CD47-201ENST00000355354 PYGBP11216 843 aa5.84□□□□□ -1.48
CD47-201ENST00000355354 ICAM3P32942 547 aa5.84□□□□□ -1.48
CD47-201ENST00000355354 CABS1Q96KC9 395 aa5.84□□□□□ -1.48
CD47-201ENST00000355354 TSPYL2Q9H2G4 693 aaPredicted RBP5.84□□□□□ -1.48
CD47-201ENST00000355354 RNF41Q9H4P4 317 aaPredicted RBP5.84□□□□□ -1.48
CD47-201ENST00000355354 PCDH12Q9NPG4 1184 aa5.84□□□□□ -1.48
CD47-201ENST00000355354 CLIC5Q9NZA1 410 aa5.84□□□□□ -1.48
CD47-201ENST00000355354 CCDC169A6NNP5 214 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 H3BNX3 289 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 TRAFD1O14545 582 aaPredicted RBP5.83□□□□□ -1.48
CD47-201ENST00000355354 PAEPP09466 180 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 OTUD4Q01804 1114 aaKnown RBP5.83□□□□□ -1.48
CD47-201ENST00000355354 BTKQ06187 659 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 SWT1Q5T5J6 900 aaKnown RBP5.83□□□□□ -1.48
CD47-201ENST00000355354 MROH9Q5TGP6 573 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 LAIR2Q6ISS4 152 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 LRRTM3Q86VH5 581 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 DENND6AQ8IWF6 608 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 C7orf57Q8NEG2 295 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.83□□□□□ -1.48
CD47-201ENST00000355354 PRPF31Q8WWY3 499 aaKnown RBP5.83□□□□□ -1.48
CD47-201ENST00000355354 SPDL1Q96EA4 605 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 AGAP3Q96P47 875 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 SRPK1Q96SB4 655 aaKnown RBP5.83□□□□□ -1.48
CD47-201ENST00000355354 ABHD16BQ9H3Z7 469 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 VIPAS39Q9H9C1 493 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 AGO4Q9HCK5 861 aaKnown RBP5.83□□□□□ -1.48
CD47-201ENST00000355354 QPCTLQ9NXS2 382 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 NOD1Q9Y239 953 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 ZNF462Q96JM2 2506 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 CFAP69A5D8W1 941 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 KBTBD13C9JR72 458 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 PGRMC1O00264 195 aaKnown RBP5.83□□□□□ -1.48
CD47-201ENST00000355354 ABCB1P08183 1280 aaPredicted RBP5.83□□□□□ -1.48
CD47-201ENST00000355354 FGFR3P22607 806 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 GRIA3P42263 894 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 BST1Q10588 318 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 LAPTM4AQ15012 233 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 RNF19BQ6ZMZ0 732 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 ZNF687Q8N1G0 1237 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 PGBD5Q8N414 524 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 CEP112Q8N8E3 955 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 MAFAQ8NHW3 353 aaPredicted RBP5.83□□□□□ -1.48
CD47-201ENST00000355354 SCAMP5Q8TAC9 235 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 ANKRD49Q8WVL7 239 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 EID2BQ96D98 161 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 MTFMTQ96DP5 389 aaKnown RBP5.83□□□□□ -1.48
CD47-201ENST00000355354 TEX13BQ9BXU2 312 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 RAB20Q9NX57 234 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.83□□□□□ -1.48
CD47-201ENST00000355354 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.83□□□□□ -1.48
CD47-201ENST00000355354 SHISA7A6NL88 538 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 DGKIO75912 1065 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 POLD2P49005 469 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 SMTNP53814 917 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 LRRC63Q05C16 580 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 KDSRQ06136 332 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 MADCAM1Q13477 382 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 TTLL4Q14679 1199 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 RNF168Q8IYW5 571 aaPredicted RBP5.83□□□□□ -1.48
CD47-201ENST00000355354 TMTC2Q8N394 836 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 SLC35B2Q8TB61 432 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 RFFLQ8WZ73 363 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 KLHL32Q96NJ5 620 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 SLC30A3Q99726 388 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 MIR1-1HGQ9H1L0 117 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 NXF3Q9H4D5 531 aaKnown RBP5.83□□□□□ -1.48
CD47-201ENST00000355354 PARVGQ9HBI0 331 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 TBX20Q9UMR3 447 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 MED16Q9Y2X0 877 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 DAAM1Q9Y4D1 1078 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 DYSFO75923 2080 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 TMEM191CA6NGB0 347 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 PIK3CDO00329 1044 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms