RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 SPATA31D3P0C874 917 aa16.44■□□□□ 0.22
NPHP3-201ENST00000337331 T-ENOLP0DO92 83 aa16.44■□□□□ 0.22
NPHP3-201ENST00000337331 CD97P48960 835 aa16.44■□□□□ 0.22
NPHP3-201ENST00000337331 PTPN11Q06124 597 aaPredicted RBP16.44■□□□□ 0.22
NPHP3-201ENST00000337331 KRT72Q14CN4 511 aa16.44■□□□□ 0.22
NPHP3-201ENST00000337331 SV2CQ496J9 727 aa16.44■□□□□ 0.22
NPHP3-201ENST00000337331 POTEHQ6S545 545 aa16.44■□□□□ 0.22
NPHP3-201ENST00000337331 MFSD7Q6UXD7 560 aa16.44■□□□□ 0.22
NPHP3-201ENST00000337331 SPATA31D4Q6ZUB0 917 aa16.44■□□□□ 0.22
NPHP3-201ENST00000337331 EFHBQ8N7U6 833 aa16.44■□□□□ 0.22
NPHP3-201ENST00000337331 SHCBP1Q8NEM2 672 aa16.44■□□□□ 0.22
NPHP3-201ENST00000337331 CNDP1Q96KN2 507 aa16.44■□□□□ 0.22
NPHP3-201ENST00000337331 NDUFS3O75489 264 aa16.44■□□□□ 0.22
NPHP3-201ENST00000337331 C1QBPQ07021 282 aaKnown RBP16.44■□□□□ 0.22
NPHP3-201ENST00000337331 DCAF4L1Q3SXM0 396 aa16.44■□□□□ 0.22
NPHP3-201ENST00000337331 TAMM41Q96BW9 452 aa16.44■□□□□ 0.22
NPHP3-201ENST00000337331 BTBD9Q96Q07 612 aa16.44■□□□□ 0.22
NPHP3-201ENST00000337331 TRIM54Q9BYV2 358 aa16.44■□□□□ 0.22
NPHP3-201ENST00000337331 ILKAPQ9H0C8 392 aaPredicted RBP16.44■□□□□ 0.22
NPHP3-201ENST00000337331 FAIMQ9NVQ4 179 aa16.44■□□□□ 0.22
NPHP3-201ENST00000337331 MAP3K20Q9NYL2 800 aaKnown RBP16.44■□□□□ 0.22
NPHP3-201ENST00000337331 TEKT2Q9UIF3 430 aa16.44■□□□□ 0.22
NPHP3-201ENST00000337331 FBXO9Q9UK97 447 aaPredicted RBP16.44■□□□□ 0.22
NPHP3-201ENST00000337331 FRMPD4Q14CM0 1322 aa16.44■□□□□ 0.22
NPHP3-201ENST00000337331 ABCC6O95255 1503 aa16.44■□□□□ 0.22
NPHP3-201ENST00000337331 OXSR1O95747 527 aaPredicted RBP16.44■□□□□ 0.22
NPHP3-201ENST00000337331 OAS1P00973 400 aaKnown RBP16.44■□□□□ 0.22
NPHP3-201ENST00000337331 ETS1P14921 441 aa16.44■□□□□ 0.22
NPHP3-201ENST00000337331 RAP1GAPP47736 663 aa16.44■□□□□ 0.22
NPHP3-201ENST00000337331 TAF6P49848 677 aa16.44■□□□□ 0.22
NPHP3-201ENST00000337331 MAP3K10Q02779 954 aa16.44■□□□□ 0.22
NPHP3-201ENST00000337331 RELAQ04206 551 aa16.44■□□□□ 0.22
NPHP3-201ENST00000337331 FBXW8Q8N3Y1 598 aa16.44■□□□□ 0.22
NPHP3-201ENST00000337331 APOL2Q9BQE5 337 aa16.44■□□□□ 0.22
NPHP3-201ENST00000337331 MTG1Q9BT17 334 aaPredicted RBP16.44■□□□□ 0.22
NPHP3-201ENST00000337331 IL1RL2Q9HB29 575 aa16.44■□□□□ 0.22
NPHP3-201ENST00000337331 KCNMB3Q9NPA1 279 aa16.44■□□□□ 0.22
NPHP3-201ENST00000337331 DSEQ9UL01 958 aa16.44■□□□□ 0.22
NPHP3-201ENST00000337331 SIN3BO75182 1162 aa16.43■□□□□ 0.22
NPHP3-201ENST00000337331 GLRA3O75311 464 aa16.43■□□□□ 0.22
NPHP3-201ENST00000337331 CRABP2P29373 138 aa16.43■□□□□ 0.22
NPHP3-201ENST00000337331 PPP3CAQ08209 521 aa16.43■□□□□ 0.22
NPHP3-201ENST00000337331 NOTUMQ6P988 496 aa16.43■□□□□ 0.22
NPHP3-201ENST00000337331 PDSS2Q86YH6 399 aa16.43■□□□□ 0.22
NPHP3-201ENST00000337331 BHLHE22Q8NFJ8 381 aaPredicted RBP16.43■□□□□ 0.22
NPHP3-201ENST00000337331 PCDH9Q9HC56 1237 aa16.43■□□□□ 0.22
NPHP3-201ENST00000337331 CASS4Q9NQ75 786 aa16.43■□□□□ 0.22
NPHP3-201ENST00000337331 PSMD12O00232 456 aaPredicted RBP16.43■□□□□ 0.22
NPHP3-201ENST00000337331 ETFBP38117 255 aa16.43■□□□□ 0.22
NPHP3-201ENST00000337331 CSE1LP55060 971 aaKnown RBP16.43■□□□□ 0.22
NPHP3-201ENST00000337331 ABCE1P61221 599 aaKnown RBP16.43■□□□□ 0.22
NPHP3-201ENST00000337331 GCNT1Q02742 428 aa16.43■□□□□ 0.22
NPHP3-201ENST00000337331 TRIM25Q14258 630 aaKnown RBP16.43■□□□□ 0.22
NPHP3-201ENST00000337331 APOBEC3HQ6NTF7 200 aaKnown RBP16.43■□□□□ 0.22
NPHP3-201ENST00000337331 ZCCHC9Q8N567 271 aaKnown RBP16.43■□□□□ 0.22
NPHP3-201ENST00000337331 FRMD8P1Q9BZ68 369 aaPredicted RBP16.43■□□□□ 0.22
NPHP3-201ENST00000337331 LRRC19Q9H756 370 aa16.43■□□□□ 0.22
NPHP3-201ENST00000337331 SHOC2Q9UQ13 582 aa16.43■□□□□ 0.22
NPHP3-201ENST00000337331 SDR42E2A6NKP2 422 aa16.43■□□□□ 0.22
NPHP3-201ENST00000337331 LAMC2Q13753 1193 aa16.43■□□□□ 0.22
NPHP3-201ENST00000337331 MYLK3Q32MK0 819 aa16.43■□□□□ 0.22
NPHP3-201ENST00000337331 OGFOD2Q6N063 350 aa16.43■□□□□ 0.22
NPHP3-201ENST00000337331 POLNQ7Z5Q5 900 aa16.43■□□□□ 0.22
NPHP3-201ENST00000337331 APOPT1Q96IL0 206 aa16.43■□□□□ 0.22
NPHP3-201ENST00000337331 LATS2Q9NRM7 1088 aa16.43■□□□□ 0.22
NPHP3-201ENST00000337331 UBQLN1Q9UMX0 589 aaKnown RBP16.43■□□□□ 0.22
NPHP3-201ENST00000337331 DNALI1O14645 258 aaPredicted RBP16.42■□□□□ 0.22
NPHP3-201ENST00000337331 PGK2P07205 417 aa16.42■□□□□ 0.22
NPHP3-201ENST00000337331 THRAP10827 490 aa16.42■□□□□ 0.22
NPHP3-201ENST00000337331 RALGDSQ12967 914 aa16.42■□□□□ 0.22
NPHP3-201ENST00000337331 SETD3Q86TU7 594 aaPredicted RBP16.42■□□□□ 0.22
NPHP3-201ENST00000337331 KIAA1257Q9ULG3 409 aa16.42■□□□□ 0.22
NPHP3-201ENST00000337331 PRPF4O43172 522 aaKnown RBP eCLIP16.42■□□□□ 0.22
NPHP3-201ENST00000337331 LSM8O95777 96 aaKnown RBP16.42■□□□□ 0.22
NPHP3-201ENST00000337331 TFE3P19532 575 aaPredicted RBP16.42■□□□□ 0.22
NPHP3-201ENST00000337331 CYP2B6P20813 491 aa16.42■□□□□ 0.22
NPHP3-201ENST00000337331 BCAP31P51572 246 aa16.42■□□□□ 0.22
NPHP3-201ENST00000337331 PDK2Q15119 407 aa16.42■□□□□ 0.22
NPHP3-201ENST00000337331 MYO1HQ8N1T3 1032 aa16.42■□□□□ 0.22
NPHP3-201ENST00000337331 HEPHQ9BQS7 1158 aa16.42■□□□□ 0.22
NPHP3-201ENST00000337331 NAT9Q9BTE0 207 aa16.42■□□□□ 0.22
NPHP3-201ENST00000337331 C1orf50Q9BV19 199 aa16.42■□□□□ 0.22
NPHP3-201ENST00000337331 PSMD13Q9UNM6 376 aa16.42■□□□□ 0.22
NPHP3-201ENST00000337331 SH3PXD2BA1X283 911 aa16.42■□□□□ 0.22
NPHP3-201ENST00000337331 STAG3L1P0CL83 205 aa16.42■□□□□ 0.22
NPHP3-201ENST00000337331 CD151P48509 253 aa16.42■□□□□ 0.22
NPHP3-201ENST00000337331 METTL21CQ5VZV1 264 aa16.42■□□□□ 0.22
NPHP3-201ENST00000337331 CYP2R1Q6VVX0 501 aa16.42■□□□□ 0.22
NPHP3-201ENST00000337331 KYQ8NBH2 561 aa16.42■□□□□ 0.22
NPHP3-201ENST00000337331 EPS8L1Q8TE68 723 aa16.42■□□□□ 0.22
NPHP3-201ENST00000337331 NSMCE4AQ9NXX6 385 aa16.42■□□□□ 0.22
NPHP3-201ENST00000337331 RGL2O15211 777 aa16.42■□□□□ 0.22
NPHP3-201ENST00000337331 CXCL8P10145 99 aa16.42■□□□□ 0.22
NPHP3-201ENST00000337331 MAPTP10636 758 aaKnown RBP16.42■□□□□ 0.22
NPHP3-201ENST00000337331 ELK3P41970 407 aa16.42■□□□□ 0.22
NPHP3-201ENST00000337331 RHBDL3P58872 404 aa16.42■□□□□ 0.22
NPHP3-201ENST00000337331 PEX6Q13608 980 aa16.42■□□□□ 0.22
NPHP3-201ENST00000337331 DENND1BQ6P3S1 775 aa16.42■□□□□ 0.22
NPHP3-201ENST00000337331 PEX5LQ8IYB4 626 aa16.42■□□□□ 0.22
NPHP3-201ENST00000337331 CENPSQ8N2Z9 138 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms