RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 AP4S1Q9Y587 144 aa16.1■□□□□ 0.17
HDAC5-202ENST00000336057 LMO7Q8WWI1 1683 aa16.1■□□□□ 0.17
HDAC5-202ENST00000336057 XRN1Q8IZH2 1706 aaKnown RBP16.09■□□□□ 0.17
HDAC5-202ENST00000336057 EDF1O60869 148 aaKnown RBP16.09■□□□□ 0.17
HDAC5-202ENST00000336057 CHRNB3Q05901 458 aa16.09■□□□□ 0.17
HDAC5-202ENST00000336057 ASTE1Q2TB18 679 aaPredicted RBP16.09■□□□□ 0.17
HDAC5-202ENST00000336057 CACHD1Q5VU97 1274 aa16.09■□□□□ 0.17
HDAC5-202ENST00000336057 PLEKHA7Q6IQ23 1121 aa16.09■□□□□ 0.17
HDAC5-202ENST00000336057 ZNF572Q7Z3I7 529 aaPredicted RBP16.09■□□□□ 0.17
HDAC5-202ENST00000336057 PLD3Q8IV08 490 aa16.09■□□□□ 0.17
HDAC5-202ENST00000336057 TRIM45Q9H8W5 580 aaPredicted RBP16.09■□□□□ 0.17
HDAC5-202ENST00000336057 SCN3BQ9NY72 215 aa16.09■□□□□ 0.17
HDAC5-202ENST00000336057 M0R3G1 203 aa16.09■□□□□ 0.17
HDAC5-202ENST00000336057 APOA1P02647 267 aa16.09■□□□□ 0.17
HDAC5-202ENST00000336057 NOS2P35228 1153 aa16.09■□□□□ 0.17
HDAC5-202ENST00000336057 SKIV2L2P42285 1042 aaKnown RBP16.09■□□□□ 0.17
HDAC5-202ENST00000336057 RENBPP51606 427 aa16.09■□□□□ 0.17
HDAC5-202ENST00000336057 NCALDP61601 193 aa16.09■□□□□ 0.17
HDAC5-202ENST00000336057 PRPF18Q99633 342 aaKnown RBP16.09■□□□□ 0.17
HDAC5-202ENST00000336057 ST6GALNAC4Q9H4F1 302 aa16.09■□□□□ 0.17
HDAC5-202ENST00000336057 ERI2A8K979 691 aaKnown RBP16.09■□□□□ 0.17
HDAC5-202ENST00000336057 DCDC2CA8MYV0 355 aa16.09■□□□□ 0.17
HDAC5-202ENST00000336057 PLSCR1O15162 318 aa16.09■□□□□ 0.17
HDAC5-202ENST00000336057 RECQL4O94761 1208 aa16.09■□□□□ 0.17
HDAC5-202ENST00000336057 UPP2O95045 317 aa16.09■□□□□ 0.17
HDAC5-202ENST00000336057 CCNE2O96020 404 aa16.09■□□□□ 0.17
HDAC5-202ENST00000336057 ME2P23368 584 aa16.09■□□□□ 0.17
HDAC5-202ENST00000336057 OXCT1P55809 520 aa16.09■□□□□ 0.17
HDAC5-202ENST00000336057 TMEM132BQ14DG7 1078 aa16.09■□□□□ 0.17
HDAC5-202ENST00000336057 NFE2Q16621 373 aaPredicted RBP16.09■□□□□ 0.17
HDAC5-202ENST00000336057 RRM2BQ7LG56 351 aa16.09■□□□□ 0.17
HDAC5-202ENST00000336057 VPS37AQ8NEZ2 397 aa16.09■□□□□ 0.17
HDAC5-202ENST00000336057 WNT8BQ93098 351 aa16.09■□□□□ 0.17
HDAC5-202ENST00000336057 COLEC11Q9BWP8 271 aa16.09■□□□□ 0.17
HDAC5-202ENST00000336057 PCDHA11Q9Y5I1 949 aa16.09■□□□□ 0.17
HDAC5-202ENST00000336057 ZMYM2Q9UBW7 1377 aa16.09■□□□□ 0.17
HDAC5-202ENST00000336057 A0A1W2PPM1 405 aa16.09■□□□□ 0.17
HDAC5-202ENST00000336057 GOLGA8TH3BQL2 631 aa16.09■□□□□ 0.17
HDAC5-202ENST00000336057 M0R2N6 131 aa16.09■□□□□ 0.17
HDAC5-202ENST00000336057 C2CD2LO14523 706 aa16.09■□□□□ 0.17
HDAC5-202ENST00000336057 ZSCAN9O15535 394 aaPredicted RBP16.09■□□□□ 0.17
HDAC5-202ENST00000336057 CELF2O95319 508 aaKnown RBP16.09■□□□□ 0.17
HDAC5-202ENST00000336057 ALDH1A3P47895 512 aa16.09■□□□□ 0.17
HDAC5-202ENST00000336057 PCYT1AP49585 367 aa16.09■□□□□ 0.17
HDAC5-202ENST00000336057 PLIN5Q00G26 463 aa16.09■□□□□ 0.17
HDAC5-202ENST00000336057 OVOS1Q6IE37 1185 aa16.09■□□□□ 0.17
HDAC5-202ENST00000336057 CDRT15Q96T59 188 aa16.09■□□□□ 0.17
HDAC5-202ENST00000336057 ZNF670Q9BS34 389 aa16.09■□□□□ 0.17
HDAC5-202ENST00000336057 ABHD16BQ9H3Z7 469 aa16.09■□□□□ 0.17
HDAC5-202ENST00000336057 LRRC4CQ9HCJ2 640 aa16.09■□□□□ 0.17
HDAC5-202ENST00000336057 SLC12A8A0AV02 714 aa16.08■□□□□ 0.17
HDAC5-202ENST00000336057 PSMB4P28070 264 aa16.08■□□□□ 0.17
HDAC5-202ENST00000336057 ADORA2AP29274 412 aa16.08■□□□□ 0.17
HDAC5-202ENST00000336057 ZNF135P52742 658 aaPredicted RBP16.08■□□□□ 0.17
HDAC5-202ENST00000336057 TTC27Q6P3X3 843 aa16.08■□□□□ 0.17
HDAC5-202ENST00000336057 TMC7Q7Z402 723 aa16.08■□□□□ 0.17
HDAC5-202ENST00000336057 HORMAD1Q86X24 394 aa16.08■□□□□ 0.17
HDAC5-202ENST00000336057 USP6NLQ92738 828 aa16.08■□□□□ 0.17
HDAC5-202ENST00000336057 DYRK4Q9NR20 520 aa16.08■□□□□ 0.17
HDAC5-202ENST00000336057 SH3BP1Q9Y3L3 701 aa16.08■□□□□ 0.17
HDAC5-202ENST00000336057 ENTPD5O75356 428 aa16.08■□□□□ 0.16
HDAC5-202ENST00000336057 FAM58BPP0C7Q3 252 aa16.08■□□□□ 0.16
HDAC5-202ENST00000336057 ZFP1Q6P2D0 407 aa16.08■□□□□ 0.16
HDAC5-202ENST00000336057 OTOAQ7RTW8 1153 aa16.08■□□□□ 0.16
HDAC5-202ENST00000336057 PSTKQ8IV42 348 aaKnown RBP16.08■□□□□ 0.16
HDAC5-202ENST00000336057 HSFY1Q96LI6 401 aa16.08■□□□□ 0.16
HDAC5-202ENST00000336057 GLT1D1Q96MS3 346 aa16.08■□□□□ 0.16
HDAC5-202ENST00000336057 TCRBV9S1A1TA0A576 114 aa16.08■□□□□ 0.16
HDAC5-202ENST00000336057 LTFP02788 710 aa16.08■□□□□ 0.16
HDAC5-202ENST00000336057 CRADDP78560 199 aa16.08■□□□□ 0.16
HDAC5-202ENST00000336057 CDH18Q13634 790 aa16.08■□□□□ 0.16
HDAC5-202ENST00000336057 RNF148Q8N7C7 305 aa16.08■□□□□ 0.16
HDAC5-202ENST00000336057 NMD3Q96D46 503 aaKnown RBP16.08■□□□□ 0.16
HDAC5-202ENST00000336057 TMEM109Q9BVC6 243 aa16.08■□□□□ 0.16
HDAC5-202ENST00000336057 ZNF556Q9HAH1 456 aa16.08■□□□□ 0.16
HDAC5-202ENST00000336057 C5orf58C9J3I9 102 aa16.08■□□□□ 0.16
HDAC5-202ENST00000336057 TULP2O00295 520 aa16.08■□□□□ 0.16
HDAC5-202ENST00000336057 RPLP2P05387 115 aaKnown RBP16.08■□□□□ 0.16
HDAC5-202ENST00000336057 CSE1LP55060 971 aaKnown RBP16.08■□□□□ 0.16
HDAC5-202ENST00000336057 CTXN3Q4LDR2 81 aa16.08■□□□□ 0.16
HDAC5-202ENST00000336057 ARCQ7LC44 396 aa16.08■□□□□ 0.16
HDAC5-202ENST00000336057 KIAA0319LQ8IZA0 1049 aa16.08■□□□□ 0.16
HDAC5-202ENST00000336057 EBNA1BP2Q99848 306 aaKnown RBP16.08■□□□□ 0.16
HDAC5-202ENST00000336057 TBL1YQ9BQ87 522 aa16.08■□□□□ 0.16
HDAC5-202ENST00000336057 ULBP1Q9BZM6 244 aa16.08■□□□□ 0.16
HDAC5-202ENST00000336057 CROTQ9UKG9 612 aa16.08■□□□□ 0.16
HDAC5-202ENST00000336057 PCDHB7Q9Y5E2 793 aa16.08■□□□□ 0.16
HDAC5-202ENST00000336057 MED1Q15648 1581 aaPredicted RBP16.07■□□□□ 0.16
HDAC5-202ENST00000336057 PIGNO95427 931 aa16.07■□□□□ 0.16
HDAC5-202ENST00000336057 PTDSS1P48651 473 aaKnown RBP16.07■□□□□ 0.16
HDAC5-202ENST00000336057 TUBP50607 506 aa16.07■□□□□ 0.16
HDAC5-202ENST00000336057 PLPPR4Q7Z2D5 763 aa16.07■□□□□ 0.16
HDAC5-202ENST00000336057 OR52K1Q8NGK4 314 aa16.07■□□□□ 0.16
HDAC5-202ENST00000336057 OR6Y1Q8NGX8 325 aa16.07■□□□□ 0.16
HDAC5-202ENST00000336057 COPS5Q92905 334 aa16.07■□□□□ 0.16
HDAC5-202ENST00000336057 RAD54BQ9Y620 910 aa16.07■□□□□ 0.16
HDAC5-202ENST00000336057 RPL14P50914 215 aaKnown RBP16.07■□□□□ 0.16
HDAC5-202ENST00000336057 FASTKQ14296 549 aaKnown RBP16.07■□□□□ 0.16
HDAC5-202ENST00000336057 IL22Q9GZX6 179 aa16.07■□□□□ 0.16
HDAC5-202ENST00000336057 MTFR1LQ9H019 292 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms