RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 PHACTR1Q9C0D0 580 aa17.48■□□□□ 0.39
TRAPPC11-201ENST00000334690 SCUBE2Q9NQ36 999 aa17.48■□□□□ 0.39
TRAPPC11-201ENST00000334690 TLR8Q9NR97 1041 aaKnown RBP17.48■□□□□ 0.39
TRAPPC11-201ENST00000334690 SPASTQ9UBP0 616 aa17.48■□□□□ 0.39
TRAPPC11-201ENST00000334690 SEPT3Q9UH03 358 aa17.48■□□□□ 0.39
TRAPPC11-201ENST00000334690 A0A0B4J269 797 aa17.48■□□□□ 0.39
TRAPPC11-201ENST00000334690 TUBP50607 506 aa17.48■□□□□ 0.39
TRAPPC11-201ENST00000334690 TBX4P57082 545 aa17.48■□□□□ 0.39
TRAPPC11-201ENST00000334690 RUNX1T1Q06455 604 aa17.48■□□□□ 0.39
TRAPPC11-201ENST00000334690 CRELD2Q6UXH1 353 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC11-201ENST00000334690 ACO2Q99798 780 aaKnown RBP17.48■□□□□ 0.39
TRAPPC11-201ENST00000334690 POLG2Q9UHN1 485 aa17.48■□□□□ 0.39
TRAPPC11-201ENST00000334690 C2CD2Q9Y426 696 aa17.48■□□□□ 0.39
TRAPPC11-201ENST00000334690 PCDHB5Q9Y5E4 795 aa17.48■□□□□ 0.39
TRAPPC11-201ENST00000334690 DAB1O75553 588 aa17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 CKMP06732 381 aa17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 RPL7AP62424 266 aaKnown RBP17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 FUT11Q495W5 492 aa17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 GALNTL6Q49A17 601 aa17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 PLPPR4Q7Z2D5 763 aa17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 SPATA17Q96L03 361 aa17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 IL22Q9GZX6 179 aa17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 RNPEPL1Q9HAU8 725 aa17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 PPP1R11O60927 126 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 SERPIND1P05546 499 aa17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 ME2P23368 584 aa17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 CSTF3Q12996 717 aaKnown RBP17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 BBS7Q8IWZ6 715 aa17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 HASPINQ8TF76 798 aa17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 ENTPD7Q9NQZ7 604 aa17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 VPS28Q9UK41 221 aa17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 DCXO43602 365 aa17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 ETS1P14921 441 aa17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 MLH1P40692 756 aa17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 MMP13P45452 471 aa17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 RHOAP61586 193 aa17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 PCBP1Q15365 356 aaKnown RBP eCLIP17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 GPR141Q7Z602 305 aa17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 ACMSDQ8TDX5 336 aa17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 ZNF670Q9BS34 389 aa17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 MTG1Q9BT17 334 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 SPATA16Q9BXB7 569 aa17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 C2CD2LO14523 706 aa17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 ALOX15BO15296 676 aa17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 DDNO94850 711 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 CALCAP01258 141 aa17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 LRG1P02750 347 aa17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 SCNN1BP51168 640 aa17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 CSE1LP55060 971 aaKnown RBP17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 MSLNQ13421 630 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 MFSD10Q14728 455 aa17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 POU5F2Q8N7G0 328 aa17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 FAM136AQ96C01 138 aa17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 PHF21BQ96EK2 531 aa17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 PURBQ96QR8 312 aaKnown RBP17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 APBA2Q99767 749 aa17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 ULBP1Q9BZM6 244 aa17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 TTYH3Q9C0H2 523 aa17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 CROTQ9UKG9 612 aa17.47■□□□□ 0.39
TRAPPC11-201ENST00000334690 NCF1BA6NI72 391 aaPredicted RBP17.46■□□□□ 0.39
TRAPPC11-201ENST00000334690 NCF1CA8MVU1 366 aaPredicted RBP17.46■□□□□ 0.39
TRAPPC11-201ENST00000334690 NOL4O94818 638 aa17.46■□□□□ 0.39
TRAPPC11-201ENST00000334690 CYP1A1P04798 512 aaPredicted RBP17.46■□□□□ 0.39
TRAPPC11-201ENST00000334690 SLURP2P0DP57 97 aa17.46■□□□□ 0.39
TRAPPC11-201ENST00000334690 NCF1P14598 390 aaPredicted RBP17.46■□□□□ 0.39
TRAPPC11-201ENST00000334690 HLA-DPA1P20036 260 aa17.46■□□□□ 0.39
TRAPPC11-201ENST00000334690 SKIV2L2P42285 1042 aaKnown RBP17.46■□□□□ 0.39
TRAPPC11-201ENST00000334690 BFSP2Q13515 415 aa17.46■□□□□ 0.39
TRAPPC11-201ENST00000334690 TMEM132BQ14DG7 1078 aa17.46■□□□□ 0.39
TRAPPC11-201ENST00000334690 LRRC74BQ6ZQY2 392 aa17.46■□□□□ 0.39
TRAPPC11-201ENST00000334690 PSTKQ8IV42 348 aaKnown RBP17.46■□□□□ 0.39
TRAPPC11-201ENST00000334690 STX19Q8N4C7 294 aa17.46■□□□□ 0.39
TRAPPC11-201ENST00000334690 TTC30BQ8N4P2 665 aa17.46■□□□□ 0.39
TRAPPC11-201ENST00000334690 SNRNP25Q9BV90 132 aaKnown RBP17.46■□□□□ 0.39
TRAPPC11-201ENST00000334690 C10orf88Q9H8K7 445 aa17.46■□□□□ 0.39
TRAPPC11-201ENST00000334690 NMRK2Q9NPI5 230 aa17.46■□□□□ 0.39
TRAPPC11-201ENST00000334690 PIH1D1Q9NWS0 290 aaKnown RBP17.46■□□□□ 0.39
TRAPPC11-201ENST00000334690 TAS2R13Q9NYV9 303 aa17.46■□□□□ 0.39
TRAPPC11-201ENST00000334690 CPA4Q9UI42 421 aa17.46■□□□□ 0.39
TRAPPC11-201ENST00000334690 TRUB2O95900 331 aaKnown RBP17.46■□□□□ 0.39
TRAPPC11-201ENST00000334690 NFICP08651 508 aa17.46■□□□□ 0.39
TRAPPC11-201ENST00000334690 ANKS6Q68DC2 871 aa17.46■□□□□ 0.39
TRAPPC11-201ENST00000334690 PRMT9Q6P2P2 845 aa17.46■□□□□ 0.39
TRAPPC11-201ENST00000334690 ZCCHC23Q6ZST2 131 aa17.46■□□□□ 0.39
TRAPPC11-201ENST00000334690 TLK2Q86UE8 772 aa17.46■□□□□ 0.39
TRAPPC11-201ENST00000334690 ADAM32Q8TC27 787 aa17.46■□□□□ 0.39
TRAPPC11-201ENST00000334690 CATSPER2Q96P56 530 aa17.46■□□□□ 0.39
TRAPPC11-201ENST00000334690 PPP1R10Q96QC0 940 aaKnown RBP17.46■□□□□ 0.39
TRAPPC11-201ENST00000334690 AAASQ9NRG9 546 aa17.46■□□□□ 0.39
TRAPPC11-201ENST00000334690 ARHGEF9O43307 516 aa17.46■□□□□ 0.39
TRAPPC11-201ENST00000334690 MBL2P11226 248 aaPredicted RBP17.46■□□□□ 0.39
TRAPPC11-201ENST00000334690 CACNA2D1P54289 1103 aa17.46■□□□□ 0.39
TRAPPC11-201ENST00000334690 DDX39BQ13838 428 aaKnown RBP17.46■□□□□ 0.39
TRAPPC11-201ENST00000334690 RETSATQ6NUM9 610 aa17.46■□□□□ 0.39
TRAPPC11-201ENST00000334690 CES3Q6UWW8 571 aa17.46■□□□□ 0.39
TRAPPC11-201ENST00000334690 SENP8Q96LD8 212 aa17.46■□□□□ 0.39
TRAPPC11-201ENST00000334690 KREMEN1Q96MU8 473 aa17.46■□□□□ 0.39
TRAPPC11-201ENST00000334690 EMILIN2Q9BXX0 1053 aa17.46■□□□□ 0.39
TRAPPC11-201ENST00000334690 FGFBP2Q9BYJ0 223 aa17.46■□□□□ 0.39
TRAPPC11-201ENST00000334690 EFR3BQ9Y2G0 817 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms