RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Foxm1O08696 760 aa15.17■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Ercc2O08811 760 aaKnown RBP15.17■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Cldn2O88552 230 aa15.17■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Gdpd4Q3TT99 632 aa15.17■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Gm4952Q5FW57 296 aa15.17■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Gpr19Q61121 415 aa15.17■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Tfdp2Q64163 446 aa15.17■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Rxfp1Q6R6I7 758 aa15.17■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Slc39a4Q78IQ7 660 aa15.17■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Olfr1057Q7TR75 315 aa15.17■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Fsd1lQ8BYN5 507 aa15.17■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Pcyox1lQ8C7K6 495 aa15.17■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Fam228aQ8CDW1 299 aa15.17■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Mmgt1Q8K273 131 aaKnown RBP15.17■□□□□ 0.02
Ercc1-201ENSMUST00000003645 SardhQ99LB7 919 aa15.17■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Fam114a1Q9D281 569 aa15.17■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Ubqln5Q9D4I8 510 aa15.17■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Kbtbd12Q9D618 625 aa15.17■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Irx4Q9QY61 515 aa15.17■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Tubb1A2AQ07 451 aa15.16■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Rsrc2A2RTL5 376 aaKnown RBP15.16■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Aldoart1A6ZI46 419 aa15.16■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Usp51B1AY15 661 aa15.16■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Gm5926E9PWJ8 236 aa15.16■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Speer4f2E9Q366 295 aa15.16■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Dpysl2O08553 572 aaKnown RBP15.16■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Sp1O89090 784 aa15.16■□□□□ 0.02
Ercc1-201ENSMUST00000003645 GsrP47791 500 aa15.16■□□□□ 0.02
Ercc1-201ENSMUST00000003645 IvlP48997 467 aa15.16■□□□□ 0.02
Ercc1-201ENSMUST00000003645 TubP50586 505 aa15.16■□□□□ 0.02
Ercc1-201ENSMUST00000003645 E2f2P56931 443 aa15.16■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Lsmem1Q3UQS2 128 aa15.16■□□□□ 0.02
Ercc1-201ENSMUST00000003645 AcrbpQ3V140 540 aa15.16■□□□□ 0.02
Ercc1-201ENSMUST00000003645 FntaQ61239 377 aa15.16■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Ggnbp1Q6K1E7 370 aa15.16■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Gpr17Q6NS65 339 aa15.16■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Tdpoz4Q6YCH2 370 aa15.16■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Olfr26Q7TRB7 308 aa15.16■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Olfr20Q7TRX9 314 aa15.16■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Fnip2Q80TD3 1108 aa15.16■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Ofcc1Q8BGX4 166 aa15.16■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Ubr7Q8BU04 425 aa15.16■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Stx16Q8BVI5 326 aa15.16■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Arhgap12Q8C0D4 838 aa15.16■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Fam129bQ8R1F1 749 aa15.16■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Art3Q8R2G4 371 aa15.16■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Tspan33Q8R3S2 283 aa15.16■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Themis2Q91YX0 663 aa15.16■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Ackr4Q924I3 350 aa15.16■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Slc39a3Q99K24 317 aa15.16■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Aco2Q99KI0 780 aaKnown RBP15.16■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Lrrc17Q9CXD9 443 aa15.16■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Wdr83Q9DAJ4 315 aaKnown RBP15.16■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Prpf4Q9DAW6 521 aaKnown RBP15.16■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Fundc1Q9DB70 155 aa15.16■□□□□ 0.02
Ercc1-201ENSMUST00000003645 PdclQ9DBX2 301 aa15.16■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Olfr933Q9EQA0 308 aa15.16■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Scn8aQ9WTU3 1978 aa15.16■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Apol7bB1AQP7 369 aa15.15■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Card6E9PWH2 1175 aa15.15■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Vmn1r176G3UW31 304 aa15.15■□□□□ 0.02
Ercc1-201ENSMUST00000003645 AfpP02772 605 aa15.15■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Myl4P09541 193 aaKnown RBP15.15■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Becn2P0DM65 447 aa15.15■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Krt19P19001 403 aa15.15■□□□□ 0.02
Ercc1-201ENSMUST00000003645 ZfaP23607 742 aa15.15■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Nfkb1P25799 971 aa15.15■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Kcnj2P35561 428 aa15.15■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Ybx1P62960 322 aaKnown RBP15.15■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Zfp217Q3U0X6 1041 aa15.15■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Apol7eQ3UZ24 369 aa15.15■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Fbxo39Q5NBU5 443 aa15.15■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Taar7eQ5QD09 358 aa15.15■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Ccdc157Q5SPX1 718 aa15.15■□□□□ 0.02
Ercc1-201ENSMUST00000003645 BadQ61337 204 aa15.15■□□□□ 0.02
Ercc1-201ENSMUST00000003645 PtprcapQ64697 197 aa15.15■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Slc39a10Q6P5F6 833 aa15.15■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Rimbp2Q80U40 1072 aa15.15■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Trim6Q8BGE7 488 aa15.15■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Epb41l5Q8BGS1 731 aa15.15■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Q8BHN7 327 aa15.15■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Bend7Q8BSV3 434 aa15.15■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Itpk1Q8BYN3 419 aa15.15■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Afap1l1Q8BZI0 768 aa15.15■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Cd300ldQ8VCH2 221 aa15.15■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Vangl2Q91ZD4 521 aa15.15■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Necab2Q91ZP9 389 aa15.15■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Ubox5Q925F4 539 aa15.15■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Tpd52l2Q9CYZ2 220 aaKnown RBP15.15■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Rexo2Q9D8S4 237 aa15.15■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Tsga13Q9DA17 273 aa15.15■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Cpb2Q9JHH6 422 aa15.15■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Map3k6Q9WTR2 1291 aa15.15■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Gm5538W4VSP6 401 aa15.15■□□□□ 0.02
Ercc1-201ENSMUST00000003645 Vmn2r27D3YUK6 857 aa15.14■□□□□ 0.01
Ercc1-201ENSMUST00000003645 Gm20431E9PY39 371 aa15.14■□□□□ 0.01
Ercc1-201ENSMUST00000003645 Gm3460E9QAI8 215 aa15.14■□□□□ 0.01
Ercc1-201ENSMUST00000003645 Mllt10O54826 1068 aa15.14■□□□□ 0.01
Ercc1-201ENSMUST00000003645 LgmnO89017 435 aa15.14■□□□□ 0.01
Ercc1-201ENSMUST00000003645 Marcksl1P28667 200 aa15.14■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 38 ms