RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 YY1P25490 414 aa12.15□□□□□ -0.47
C11orf54-215ENST00000617482 GRM5P41594 1212 aa12.15□□□□□ -0.47
C11orf54-215ENST00000617482 SLC1A6P48664 564 aa12.15□□□□□ -0.47
C11orf54-215ENST00000617482 SNX16P57768 344 aa12.15□□□□□ -0.47
C11orf54-215ENST00000617482 PDE1BQ01064 536 aa12.15□□□□□ -0.47
C11orf54-215ENST00000617482 WASHC5Q12768 1159 aa12.15□□□□□ -0.47
C11orf54-215ENST00000617482 R3HDM1Q15032 1099 aaKnown RBP12.15□□□□□ -0.47
C11orf54-215ENST00000617482 ZNF618Q5T7W0 954 aa12.15□□□□□ -0.47
C11orf54-215ENST00000617482 C1orf146Q5VVC0 180 aa12.15□□□□□ -0.47
C11orf54-215ENST00000617482 MBLAC2Q68D91 279 aa12.15□□□□□ -0.47
C11orf54-215ENST00000617482 NAIF1Q69YI7 327 aaPredicted RBP12.15□□□□□ -0.47
C11orf54-215ENST00000617482 PACS1Q6VY07 963 aa12.15□□□□□ -0.47
C11orf54-215ENST00000617482 KYAT3Q6YP21 454 aaKnown RBP12.15□□□□□ -0.47
C11orf54-215ENST00000617482 ARCQ7LC44 396 aa12.15□□□□□ -0.47
C11orf54-215ENST00000617482 ZDHHC17Q8IUH5 632 aa12.15□□□□□ -0.47
C11orf54-215ENST00000617482 WDR75Q8IWA0 830 aaKnown RBP12.15□□□□□ -0.47
C11orf54-215ENST00000617482 POU5F2Q8N7G0 328 aa12.15□□□□□ -0.47
C11orf54-215ENST00000617482 CCNYQ8ND76 341 aa12.15□□□□□ -0.47
C11orf54-215ENST00000617482 PIWIL2Q8TC59 973 aaKnown RBP12.15□□□□□ -0.47
C11orf54-215ENST00000617482 GCOM2Q9BZD3 368 aaPredicted RBP12.15□□□□□ -0.47
C11orf54-215ENST00000617482 ZNF212Q9UDV6 495 aa12.15□□□□□ -0.47
C11orf54-215ENST00000617482 A0A0A0MRY4 1105 aa12.14□□□□□ -0.47
C11orf54-215ENST00000617482 H3BRB1 525 aa12.14□□□□□ -0.47
C11orf54-215ENST00000617482 DGKIO75912 1065 aa12.14□□□□□ -0.47
C11orf54-215ENST00000617482 F7P08709 466 aaPredicted RBP12.14□□□□□ -0.47
C11orf54-215ENST00000617482 ERVK-10P10266 1014 aa12.14□□□□□ -0.47
C11orf54-215ENST00000617482 FGF3P11487 239 aaPredicted RBP12.14□□□□□ -0.47
C11orf54-215ENST00000617482 ARL4AP40617 200 aa12.14□□□□□ -0.47
C11orf54-215ENST00000617482 ADCYAP1R1P41586 468 aa12.14□□□□□ -0.47
C11orf54-215ENST00000617482 SLC25A3Q00325 362 aa12.14□□□□□ -0.47
C11orf54-215ENST00000617482 OLIG2Q13516 323 aa12.14□□□□□ -0.47
C11orf54-215ENST00000617482 TTLL12Q14166 644 aaPredicted RBP12.14□□□□□ -0.47
C11orf54-215ENST00000617482 TEDDM1Q5T9Z0 273 aa12.14□□□□□ -0.47
C11orf54-215ENST00000617482 ATG14Q6ZNE5 492 aa12.14□□□□□ -0.47
C11orf54-215ENST00000617482 SLC26A9Q7LBE3 791 aa12.14□□□□□ -0.47
C11orf54-215ENST00000617482 RSPH3Q86UC2 560 aa12.14□□□□□ -0.47
C11orf54-215ENST00000617482 ERO1BQ86YB8 467 aa12.14□□□□□ -0.47
C11orf54-215ENST00000617482 NT5DC4Q86YG4 428 aa12.14□□□□□ -0.47
C11orf54-215ENST00000617482 C10orf107Q8IVU9 208 aa12.14□□□□□ -0.47
C11orf54-215ENST00000617482 SULF1Q8IWU6 871 aa12.14□□□□□ -0.47
C11orf54-215ENST00000617482 GPC2Q8N158 579 aa12.14□□□□□ -0.47
C11orf54-215ENST00000617482 RAB3IL1Q8TBN0 382 aa12.14□□□□□ -0.47
C11orf54-215ENST00000617482 ARNTL2Q8WYA1 636 aa12.14□□□□□ -0.47
C11orf54-215ENST00000617482 FAM149B1Q96BN6 582 aa12.14□□□□□ -0.47
C11orf54-215ENST00000617482 SPATA13Q96N96 652 aa12.14□□□□□ -0.47
C11orf54-215ENST00000617482 C16orf70Q9BSU1 422 aa12.14□□□□□ -0.47
C11orf54-215ENST00000617482 PPP1R12CQ9BZL4 782 aa12.14□□□□□ -0.47
C11orf54-215ENST00000617482 SHCBP1LQ9BZQ2 653 aa12.14□□□□□ -0.47
C11orf54-215ENST00000617482 TUT1Q9H6E5 874 aaKnown RBP12.14□□□□□ -0.47
C11orf54-215ENST00000617482 PNPOQ9NVS9 261 aa12.14□□□□□ -0.47
C11orf54-215ENST00000617482 GJD2Q9UKL4 321 aa12.14□□□□□ -0.47
C11orf54-215ENST00000617482 SCN1AP35498 2009 aa12.14□□□□□ -0.47
C11orf54-215ENST00000617482 TRIP11Q15643 1979 aa12.14□□□□□ -0.47
C11orf54-215ENST00000617482 ASB14A6NK59 587 aa12.13□□□□□ -0.47
C11orf54-215ENST00000617482 ZNF487B1APH4 448 aa12.13□□□□□ -0.47
C11orf54-215ENST00000617482 RNF103O00237 685 aa12.13□□□□□ -0.47
C11orf54-215ENST00000617482 MAP3K13O43283 966 aa12.13□□□□□ -0.47
C11orf54-215ENST00000617482 MFSD11O43934 449 aa12.13□□□□□ -0.47
C11orf54-215ENST00000617482 ALDH1A2O94788 518 aa12.13□□□□□ -0.47
C11orf54-215ENST00000617482 ANPEPP15144 967 aa12.13□□□□□ -0.47
C11orf54-215ENST00000617482 AKAP5P24588 427 aa12.13□□□□□ -0.47
C11orf54-215ENST00000617482 CNTFP26441 200 aa12.13□□□□□ -0.47
C11orf54-215ENST00000617482 HOXA11P31270 313 aaPredicted RBP12.13□□□□□ -0.47
C11orf54-215ENST00000617482 GNL1P36915 607 aaPredicted RBP12.13□□□□□ -0.47
C11orf54-215ENST00000617482 MLH1P40692 756 aa12.13□□□□□ -0.47
C11orf54-215ENST00000617482 IREB2P48200 963 aaKnown RBP12.13□□□□□ -0.47
C11orf54-215ENST00000617482 PITX1P78337 314 aaPredicted RBP12.13□□□□□ -0.47
C11orf54-215ENST00000617482 SATB1Q01826 763 aa12.13□□□□□ -0.47
C11orf54-215ENST00000617482 BST2Q10589 180 aaKnown RBP12.13□□□□□ -0.47
C11orf54-215ENST00000617482 MARCH8Q5T0T0 291 aa12.13□□□□□ -0.47
C11orf54-215ENST00000617482 VWA5B1Q5TIE3 1220 aa12.13□□□□□ -0.47
C11orf54-215ENST00000617482 IRGCQ6NXR0 463 aa12.13□□□□□ -0.47
C11orf54-215ENST00000617482 TAPT1Q6NXT6 567 aa12.13□□□□□ -0.47
C11orf54-215ENST00000617482 NET1Q7Z628 596 aaPredicted RBP12.13□□□□□ -0.47
C11orf54-215ENST00000617482 TP53INP2Q8IXH6 220 aa12.13□□□□□ -0.47
C11orf54-215ENST00000617482 ANKRD52Q8NB46 1076 aa12.13□□□□□ -0.47
C11orf54-215ENST00000617482 SLC2A14Q8TDB8 520 aa12.13□□□□□ -0.47
C11orf54-215ENST00000617482 CDKL2Q92772 493 aa12.13□□□□□ -0.47
C11orf54-215ENST00000617482 DCPSQ96C86 337 aaKnown RBP12.13□□□□□ -0.47
C11orf54-215ENST00000617482 P2RY11Q96G91 374 aa12.13□□□□□ -0.47
C11orf54-215ENST00000617482 ATXN7L3BQ96GX2 97 aa12.13□□□□□ -0.47
C11orf54-215ENST00000617482 FAM49AQ9H0Q0 323 aaPredicted RBP12.13□□□□□ -0.47
C11orf54-215ENST00000617482 ZNF358Q9NW07 568 aa12.13□□□□□ -0.47
C11orf54-215ENST00000617482 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.13□□□□□ -0.47
C11orf54-215ENST00000617482 MORF4L1Q9UBU8 362 aa12.13□□□□□ -0.47
C11orf54-215ENST00000617482 APOBEC2Q9Y235 224 aaKnown RBP12.13□□□□□ -0.47
C11orf54-215ENST00000617482 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.13□□□□□ -0.47
C11orf54-215ENST00000617482 CCDC189A1A4V9 331 aa12.13□□□□□ -0.47
C11orf54-215ENST00000617482 ARHGAP42A6NI28 874 aa12.13□□□□□ -0.47
C11orf54-215ENST00000617482 F8W8V4 182 aa12.13□□□□□ -0.47
C11orf54-215ENST00000617482 CREB3O43889 395 aa12.13□□□□□ -0.47
C11orf54-215ENST00000617482 PLIN3O60664 434 aa12.13□□□□□ -0.47
C11orf54-215ENST00000617482 ITGA2BP08514 1039 aa12.13□□□□□ -0.47
C11orf54-215ENST00000617482 PSMB4P28070 264 aa12.13□□□□□ -0.47
C11orf54-215ENST00000617482 GTF2A2P52657 109 aa12.13□□□□□ -0.47
C11orf54-215ENST00000617482 ACTR3P61158 418 aa12.13□□□□□ -0.47
C11orf54-215ENST00000617482 NIPAL4Q0D2K0 466 aa12.13□□□□□ -0.47
C11orf54-215ENST00000617482 ZRSR2Q15696 482 aaKnown RBP12.13□□□□□ -0.47
C11orf54-215ENST00000617482 DNAL1Q4LDG9 190 aa12.13□□□□□ -0.47
C11orf54-215ENST00000617482 DCAF6Q58WW2 860 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms