RNA–Protein interactions for RNA: ENST00000602263.5

FARP1-240, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 867 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-240ENST00000602263 COBLL1Q53SF7 1204 aa10.91□□□□□ -0.66
FARP1-240ENST00000602263 CHST9Q7L1S5 443 aa10.91□□□□□ -0.66
FARP1-240ENST00000602263 FAM124AQ86V42 546 aa10.91□□□□□ -0.66
FARP1-240ENST00000602263 AHI1Q8N157 1196 aa10.91□□□□□ -0.66
FARP1-240ENST00000602263 CHCHD4Q8N4Q1 142 aa10.91□□□□□ -0.66
FARP1-240ENST00000602263 ZNF557Q8N988 423 aaPredicted RBP10.91□□□□□ -0.66
FARP1-240ENST00000602263 UBA3Q8TBC4 463 aa10.91□□□□□ -0.66
FARP1-240ENST00000602263 KCTD13Q8WZ19 329 aa10.91□□□□□ -0.66
FARP1-240ENST00000602263 SNX19Q92543 992 aa10.91□□□□□ -0.66
FARP1-240ENST00000602263 GOLGA1Q92805 767 aa10.91□□□□□ -0.66
FARP1-240ENST00000602263 TMA16Q96EY4 203 aaKnown RBP10.91□□□□□ -0.66
FARP1-240ENST00000602263 CAMK1GQ96NX5 476 aa10.91□□□□□ -0.66
FARP1-240ENST00000602263 GSDMAQ96QA5 445 aa10.91□□□□□ -0.66
FARP1-240ENST00000602263 LHX5Q9H2C1 402 aa10.91□□□□□ -0.66
FARP1-240ENST00000602263 GDPD2Q9HCC8 539 aa10.91□□□□□ -0.66
FARP1-240ENST00000602263 ABCB8Q9NUT2 735 aa10.91□□□□□ -0.66
FARP1-240ENST00000602263 GGA2Q9UJY4 613 aa10.91□□□□□ -0.66
FARP1-240ENST00000602263 STOML2Q9UJZ1 356 aa10.91□□□□□ -0.66
FARP1-240ENST00000602263 COQ4Q9Y3A0 265 aa10.91□□□□□ -0.66
FARP1-240ENST00000602263 NYNRINQ9P2P1 1898 aaKnown RBP10.91□□□□□ -0.66
FARP1-240ENST00000602263 PLXNB3Q9ULL4 1909 aa10.9□□□□□ -0.66
FARP1-240ENST00000602263 LAMA5O15230 3695 aa10.9□□□□□ -0.66
FARP1-240ENST00000602263 TYW5A2RUC4 315 aaKnown RBP10.9□□□□□ -0.66
FARP1-240ENST00000602263 SRRM3A6NNA2 597 aaPredicted RBP10.9□□□□□ -0.66
FARP1-240ENST00000602263 YJEFN3A6XGL0 299 aa10.9□□□□□ -0.66
FARP1-240ENST00000602263 E7ENQ6 273 aa10.9□□□□□ -0.66
FARP1-240ENST00000602263 O00370 1275 aa10.9□□□□□ -0.66
FARP1-240ENST00000602263 PSMA7O14818 248 aa10.9□□□□□ -0.66
FARP1-240ENST00000602263 MSI1O43347 362 aaKnown RBP10.9□□□□□ -0.66
FARP1-240ENST00000602263 ATP5BP06576 529 aaKnown RBP10.9□□□□□ -0.66
FARP1-240ENST00000602263 FTH1P19P0C7X4 201 aa10.9□□□□□ -0.66
FARP1-240ENST00000602263 PABPC1P11940 636 aaKnown RBP10.9□□□□□ -0.66
FARP1-240ENST00000602263 HLA-EP13747 358 aa10.9□□□□□ -0.66
FARP1-240ENST00000602263 LCP1P13796 627 aa10.9□□□□□ -0.66
FARP1-240ENST00000602263 HLA-FP30511 346 aa10.9□□□□□ -0.66
FARP1-240ENST00000602263 SLC11A2P49281 568 aa10.9□□□□□ -0.66
FARP1-240ENST00000602263 CETN1Q12798 172 aa10.9□□□□□ -0.66
FARP1-240ENST00000602263 CAMK2GQ13555 558 aaPredicted RBP10.9□□□□□ -0.66
FARP1-240ENST00000602263 TEAD4Q15561 434 aa10.9□□□□□ -0.66
FARP1-240ENST00000602263 TTC31Q49AM3 519 aaPredicted RBP10.9□□□□□ -0.66
FARP1-240ENST00000602263 ADGRF1Q5T601 910 aa10.9□□□□□ -0.66
FARP1-240ENST00000602263 NUGGCQ68CJ6 796 aa10.9□□□□□ -0.66
FARP1-240ENST00000602263 TMEM215Q68D42 235 aa10.9□□□□□ -0.66
FARP1-240ENST00000602263 ANKRD40Q6AI12 368 aa10.9□□□□□ -0.66
FARP1-240ENST00000602263 TMEM270Q6UE05 265 aa10.9□□□□□ -0.66
FARP1-240ENST00000602263 LCLAT1Q6UWP7 414 aa10.9□□□□□ -0.66
FARP1-240ENST00000602263 BHLHA9Q7RTU4 235 aa10.9□□□□□ -0.66
FARP1-240ENST00000602263 RAB44Q7Z6P3 723 aaPredicted RBP10.9□□□□□ -0.66
FARP1-240ENST00000602263 ZC3H3Q8IXZ2 948 aaKnown RBP10.9□□□□□ -0.66
FARP1-240ENST00000602263 SCML4Q8N228 414 aa10.9□□□□□ -0.66
FARP1-240ENST00000602263 RBBP8NLQ8NC74 664 aaPredicted RBP10.9□□□□□ -0.66
FARP1-240ENST00000602263 SETD7Q8WTS6 366 aaKnown RBP10.9□□□□□ -0.66
FARP1-240ENST00000602263 CYB5D2Q8WUJ1 264 aa10.9□□□□□ -0.66
FARP1-240ENST00000602263 IRGQQ8WZA9 623 aa10.9□□□□□ -0.66
FARP1-240ENST00000602263 SMARCE1Q969G3 411 aa10.9□□□□□ -0.66
FARP1-240ENST00000602263 NT5C1BQ96P26 610 aa10.9□□□□□ -0.66
FARP1-240ENST00000602263 DDX50Q9BQ39 737 aaKnown RBP10.9□□□□□ -0.66
FARP1-240ENST00000602263 IRX2Q9BZI1 471 aaPredicted RBP10.9□□□□□ -0.66
FARP1-240ENST00000602263 GAREM1Q9H706 876 aa10.9□□□□□ -0.66
FARP1-240ENST00000602263 METTL14Q9HCE5 456 aaKnown RBP10.9□□□□□ -0.66
FARP1-240ENST00000602263 EIF2B4Q9UI10 523 aaKnown RBP10.9□□□□□ -0.66
FARP1-240ENST00000602263 RALYQ9UKM9 306 aaKnown RBP10.9□□□□□ -0.66
FARP1-240ENST00000602263 APOBEC2Q9Y235 224 aaKnown RBP10.9□□□□□ -0.66
FARP1-240ENST00000602263 BAHCC1Q9P281 2608 aa10.89□□□□□ -0.67
FARP1-240ENST00000602263 FAM221BA6H8Z2 402 aa10.89□□□□□ -0.67
FARP1-240ENST00000602263 M0QYV0 167 aa10.89□□□□□ -0.67
FARP1-240ENST00000602263 IRAK2O43187 625 aa10.89□□□□□ -0.67
FARP1-240ENST00000602263 DNTTP04053 509 aa10.89□□□□□ -0.67
FARP1-240ENST00000602263 PAEPP09466 180 aa10.89□□□□□ -0.67
FARP1-240ENST00000602263 DLDP09622 509 aaKnown RBP10.89□□□□□ -0.67
FARP1-240ENST00000602263 ZNF883P0CG24 379 aa10.89□□□□□ -0.67
FARP1-240ENST00000602263 POLR2EP19388 210 aaKnown RBP10.89□□□□□ -0.67
FARP1-240ENST00000602263 RGS7P49802 495 aa10.89□□□□□ -0.67
FARP1-240ENST00000602263 AFF3P51826 1226 aaKnown RBP10.89□□□□□ -0.67
FARP1-240ENST00000602263 DAOAP59103 153 aa10.89□□□□□ -0.67
FARP1-240ENST00000602263 ZBTB16Q05516 673 aa10.89□□□□□ -0.67
FARP1-240ENST00000602263 STILQ15468 1287 aa10.89□□□□□ -0.67
FARP1-240ENST00000602263 CCDC40Q4G0X9 1142 aa10.89□□□□□ -0.67
FARP1-240ENST00000602263 MPP7Q5T2T1 576 aa10.89□□□□□ -0.67
FARP1-240ENST00000602263 MBLAC2Q68D91 279 aa10.89□□□□□ -0.67
FARP1-240ENST00000602263 MSANTD2Q6P1R3 559 aa10.89□□□□□ -0.67
FARP1-240ENST00000602263 CCDC117Q8IWD4 279 aaPredicted RBP10.89□□□□□ -0.67
FARP1-240ENST00000602263 UNC45BQ8IWX7 931 aa10.89□□□□□ -0.67
FARP1-240ENST00000602263 FMR1NBQ8N0W7 255 aaPredicted RBP10.89□□□□□ -0.67
FARP1-240ENST00000602263 PPM1KQ8N3J5 372 aa10.89□□□□□ -0.67
FARP1-240ENST00000602263 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.89□□□□□ -0.67
FARP1-240ENST00000602263 ADAMTS14Q8WXS8 1223 aa10.89□□□□□ -0.67
FARP1-240ENST00000602263 SLC35C1Q96A29 364 aa10.89□□□□□ -0.67
FARP1-240ENST00000602263 BTBD1Q9H0C5 482 aa10.89□□□□□ -0.67
FARP1-240ENST00000602263 TMEM245Q9H330 911 aa10.89□□□□□ -0.67
FARP1-240ENST00000602263 TM7SF3Q9NS93 570 aa10.89□□□□□ -0.67
FARP1-240ENST00000602263 SUN2Q9UH99 717 aa10.89□□□□□ -0.67
FARP1-240ENST00000602263 PCOLCE2Q9UKZ9 415 aa10.89□□□□□ -0.67
FARP1-240ENST00000602263 PCDHB4Q9Y5E5 795 aa10.89□□□□□ -0.67
FARP1-240ENST00000602263 NBEAQ8NFP9 2946 aa10.88□□□□□ -0.67
FARP1-240ENST00000602263 TRIM49BA6NDI0 452 aa10.88□□□□□ -0.67
FARP1-240ENST00000602263 FLRT2O43155 660 aa10.88□□□□□ -0.67
FARP1-240ENST00000602263 TBL1XO60907 577 aa10.88□□□□□ -0.67
FARP1-240ENST00000602263 FBXO21O94952 628 aa10.88□□□□□ -0.67
FARP1-240ENST00000602263 SEMA4FO95754 770 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms