RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 TMPRSS6Q8IU80 811 aa18.32■□□□□ 0.52
SHKBP1-203ENST00000594298 PRCCQ92733 491 aaPredicted RBP18.32■□□□□ 0.52
SHKBP1-203ENST00000594298 PLD4Q96BZ4 506 aa18.32■□□□□ 0.52
SHKBP1-203ENST00000594298 SIPA1Q96FS4 1042 aa18.32■□□□□ 0.52
SHKBP1-203ENST00000594298 ARID3AQ99856 593 aa18.32■□□□□ 0.52
SHKBP1-203ENST00000594298 TUBGCP2Q9BSJ2 902 aa18.32■□□□□ 0.52
SHKBP1-203ENST00000594298 TMEM63CQ9P1W3 806 aa18.32■□□□□ 0.52
SHKBP1-203ENST00000594298 SLC12A8A0AV02 714 aa18.31■□□□□ 0.52
SHKBP1-203ENST00000594298 MEI4A8MW99 385 aa18.31■□□□□ 0.52
SHKBP1-203ENST00000594298 C7P10643 843 aa18.31■□□□□ 0.52
SHKBP1-203ENST00000594298 COPAP53621 1224 aa18.31■□□□□ 0.52
SHKBP1-203ENST00000594298 KCNJ12Q14500 433 aa18.31■□□□□ 0.52
SHKBP1-203ENST00000594298 TRIP6Q15654 476 aaKnown RBP18.31■□□□□ 0.52
SHKBP1-203ENST00000594298 KLHL40Q2TBA0 621 aa18.31■□□□□ 0.52
SHKBP1-203ENST00000594298 VWA3BQ502W6 1294 aa18.31■□□□□ 0.52
SHKBP1-203ENST00000594298 ENOSF1Q7L5Y1 443 aa18.31■□□□□ 0.52
SHKBP1-203ENST00000594298 BHLHA9Q7RTU4 235 aa18.31■□□□□ 0.52
SHKBP1-203ENST00000594298 NAXDQ8IW45 347 aa18.31■□□□□ 0.52
SHKBP1-203ENST00000594298 CHCHD4Q8N4Q1 142 aa18.31■□□□□ 0.52
SHKBP1-203ENST00000594298 ANKRD20A12PQ8NF67 263 aa18.31■□□□□ 0.52
SHKBP1-203ENST00000594298 CAMK1GQ96NX5 476 aa18.31■□□□□ 0.52
SHKBP1-203ENST00000594298 GPR174Q9BXC1 333 aa18.31■□□□□ 0.52
SHKBP1-203ENST00000594298 CLEC4EQ9ULY5 219 aa18.31■□□□□ 0.52
SHKBP1-203ENST00000594298 PCDHB4Q9Y5E5 795 aa18.31■□□□□ 0.52
SHKBP1-203ENST00000594298 METTL12A8MUP2 240 aa18.3■□□□□ 0.52
SHKBP1-203ENST00000594298 ZBED1O96006 694 aa18.3■□□□□ 0.52
SHKBP1-203ENST00000594298 PRKCHP24723 683 aa18.3■□□□□ 0.52
SHKBP1-203ENST00000594298 PI4KAP42356 2102 aa18.3■□□□□ 0.52
SHKBP1-203ENST00000594298 TKTL1P51854 596 aa18.3■□□□□ 0.52
SHKBP1-203ENST00000594298 ZNF445P59923 1031 aa18.3■□□□□ 0.52
SHKBP1-203ENST00000594298 TYRO3Q06418 890 aa18.3■□□□□ 0.52
SHKBP1-203ENST00000594298 EXOC3L4Q17RC7 722 aa18.3■□□□□ 0.52
SHKBP1-203ENST00000594298 SGO2Q562F6 1265 aa18.3■□□□□ 0.52
SHKBP1-203ENST00000594298 DCAF12L1Q5VU92 463 aa18.3■□□□□ 0.52
SHKBP1-203ENST00000594298 TMEM215Q68D42 235 aa18.3■□□□□ 0.52
SHKBP1-203ENST00000594298 SMYD5Q6GMV2 418 aa18.3■□□□□ 0.52
SHKBP1-203ENST00000594298 GLRX5Q86SX6 157 aa18.3■□□□□ 0.52
SHKBP1-203ENST00000594298 DDI1Q8WTU0 396 aa18.3■□□□□ 0.52
SHKBP1-203ENST00000594298 ADAMTS14Q8WXS8 1223 aa18.3■□□□□ 0.52
SHKBP1-203ENST00000594298 NUP58Q9BVL2 599 aa18.3■□□□□ 0.52
SHKBP1-203ENST00000594298 PCED1AQ9H1Q7 454 aa18.3■□□□□ 0.52
SHKBP1-203ENST00000594298 NDST4Q9H3R1 872 aa18.3■□□□□ 0.52
SHKBP1-203ENST00000594298 SAMSN1Q9NSI8 373 aaKnown RBP18.3■□□□□ 0.52
SHKBP1-203ENST00000594298 OLA1Q9NTK5 396 aaKnown RBP18.3■□□□□ 0.52
SHKBP1-203ENST00000594298 STOML2Q9UJZ1 356 aa18.3■□□□□ 0.52
SHKBP1-203ENST00000594298 CEP192Q8TEP8 1941 aa18.29■□□□□ 0.52
SHKBP1-203ENST00000594298 GON4LQ3T8J9 2241 aa18.29■□□□□ 0.52
SHKBP1-203ENST00000594298 PES1O00541 588 aaKnown RBP18.29■□□□□ 0.52
SHKBP1-203ENST00000594298 XPO1O14980 1071 aaKnown RBP18.29■□□□□ 0.52
SHKBP1-203ENST00000594298 BCAT2O15382 392 aaPredicted RBP18.29■□□□□ 0.52
SHKBP1-203ENST00000594298 CBFA2T3O75081 653 aa18.29■□□□□ 0.52
SHKBP1-203ENST00000594298 CAPNS1P04632 268 aa18.29■□□□□ 0.52
SHKBP1-203ENST00000594298 PAEPP09466 180 aa18.29■□□□□ 0.52
SHKBP1-203ENST00000594298 ZNF883P0CG24 379 aa18.29■□□□□ 0.52
SHKBP1-203ENST00000594298 VDRP11473 427 aa18.29■□□□□ 0.52
SHKBP1-203ENST00000594298 CD19P15391 556 aa18.29■□□□□ 0.52
SHKBP1-203ENST00000594298 MYL5Q02045 173 aa18.29■□□□□ 0.52
SHKBP1-203ENST00000594298 PDE4CQ08493 712 aa18.29■□□□□ 0.52
SHKBP1-203ENST00000594298 SKOR2Q2VWA4 1001 aaPredicted RBP18.29■□□□□ 0.52
SHKBP1-203ENST00000594298 MPPE1Q53F39 396 aa18.29■□□□□ 0.52
SHKBP1-203ENST00000594298 TCP11X2Q5H9J9 407 aa18.29■□□□□ 0.52
SHKBP1-203ENST00000594298 TMEM270Q6UE05 265 aa18.29■□□□□ 0.52
SHKBP1-203ENST00000594298 RRAGAQ7L523 313 aa18.29■□□□□ 0.52
SHKBP1-203ENST00000594298 UBR7Q8N806 425 aa18.29■□□□□ 0.52
SHKBP1-203ENST00000594298 ULBP1Q9BZM6 244 aa18.29■□□□□ 0.52
SHKBP1-203ENST00000594298 CIPCQ9C0C6 399 aa18.29■□□□□ 0.52
SHKBP1-203ENST00000594298 UBE2TQ9NPD8 197 aaPredicted RBP18.29■□□□□ 0.52
SHKBP1-203ENST00000594298 HESX1Q9UBX0 185 aa18.29■□□□□ 0.52
SHKBP1-203ENST00000594298 HBS1LQ9Y450 684 aaKnown RBP18.29■□□□□ 0.52
SHKBP1-203ENST00000594298 PCDHB9Q9Y5E1 797 aa18.29■□□□□ 0.52
SHKBP1-203ENST00000594298 PCNX2A6NKB5 2137 aa18.29■□□□□ 0.52
SHKBP1-203ENST00000594298 SPEGQ15772 3267 aa18.29■□□□□ 0.52
SHKBP1-203ENST00000594298 MYH10P35580 1976 aa18.28■□□□□ 0.52
SHKBP1-203ENST00000594298 LATS1O95835 1130 aa18.28■□□□□ 0.52
SHKBP1-203ENST00000594298 EPHX1P07099 455 aa18.28■□□□□ 0.52
SHKBP1-203ENST00000594298 ACADMP11310 421 aa18.28■□□□□ 0.52
SHKBP1-203ENST00000594298 HOXD9P28356 352 aaPredicted RBP18.28■□□□□ 0.52
SHKBP1-203ENST00000594298 HARS2P49590 506 aaKnown RBP18.28■□□□□ 0.52
SHKBP1-203ENST00000594298 BCAT1P54687 386 aa18.28■□□□□ 0.52
SHKBP1-203ENST00000594298 CAMK2GQ13555 558 aaPredicted RBP18.28■□□□□ 0.52
SHKBP1-203ENST00000594298 STILQ15468 1287 aa18.28■□□□□ 0.52
SHKBP1-203ENST00000594298 HSP90AA4PQ58FG1 418 aa18.28■□□□□ 0.52
SHKBP1-203ENST00000594298 TRIM65Q6PJ69 517 aa18.28■□□□□ 0.52
SHKBP1-203ENST00000594298 IL27RAQ6UWB1 636 aa18.28■□□□□ 0.52
SHKBP1-203ENST00000594298 SERPINA13PQ6UXR4 307 aa18.28■□□□□ 0.52
SHKBP1-203ENST00000594298 C11orf57Q6ZUT1 292 aaPredicted RBP18.28■□□□□ 0.52
SHKBP1-203ENST00000594298 ARHGEF19Q8IW93 802 aa18.28■□□□□ 0.52
SHKBP1-203ENST00000594298 ZCCHC9Q8N567 271 aaKnown RBP18.28■□□□□ 0.52
SHKBP1-203ENST00000594298 OR2T3Q8NH03 318 aa18.28■□□□□ 0.52
SHKBP1-203ENST00000594298 C1orf216Q8TAB5 229 aa18.28■□□□□ 0.52
SHKBP1-203ENST00000594298 SORCS1Q8WY21 1168 aa18.28■□□□□ 0.52
SHKBP1-203ENST00000594298 CRACR2AQ9BSW2 395 aa18.28■□□□□ 0.52
SHKBP1-203ENST00000594298 TSPAN16Q9UKR8 245 aa18.28■□□□□ 0.52
SHKBP1-203ENST00000594298 ADAMTS9Q9P2N4 1935 aa18.27■□□□□ 0.52
SHKBP1-203ENST00000594298 TULP2O00295 520 aa18.27■□□□□ 0.52
SHKBP1-203ENST00000594298 FTH1P19P0C7X4 201 aa18.27■□□□□ 0.52
SHKBP1-203ENST00000594298 SLC9A1P19634 815 aa18.27■□□□□ 0.52
SHKBP1-203ENST00000594298 HLA-FP30511 346 aa18.27■□□□□ 0.52
SHKBP1-203ENST00000594298 ARID5AQ03989 594 aa18.27■□□□□ 0.52
SHKBP1-203ENST00000594298 BST2Q10589 180 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms