RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 UQCRFS1P1P0C7P4 283 aa6.1□□□□□ -1.43
SF3B3-214ENST00000572365 GNAT2P19087 354 aa6.1□□□□□ -1.43
SF3B3-214ENST00000572365 CNR2P34972 360 aa6.1□□□□□ -1.43
SF3B3-214ENST00000572365 NRIP1P48552 1158 aa6.1□□□□□ -1.43
SF3B3-214ENST00000572365 RAP2BP61225 183 aa6.1□□□□□ -1.43
SF3B3-214ENST00000572365 CAMK1Q14012 370 aa6.1□□□□□ -1.43
SF3B3-214ENST00000572365 UBXN2BQ14CS0 331 aa6.1□□□□□ -1.43
SF3B3-214ENST00000572365 PWP2Q15269 919 aaKnown RBP6.1□□□□□ -1.43
SF3B3-214ENST00000572365 EXOC8Q8IYI6 725 aa6.1□□□□□ -1.43
SF3B3-214ENST00000572365 MDGA1Q8NFP4 955 aa6.1□□□□□ -1.43
SF3B3-214ENST00000572365 OR52N2Q8NGI0 321 aa6.1□□□□□ -1.43
SF3B3-214ENST00000572365 DEPTORQ8TB45 409 aa6.1□□□□□ -1.43
SF3B3-214ENST00000572365 ST8SIA2Q92186 375 aa6.1□□□□□ -1.43
SF3B3-214ENST00000572365 TFAP2CQ92754 450 aa6.1□□□□□ -1.43
SF3B3-214ENST00000572365 SGCZQ96LD1 299 aa6.1□□□□□ -1.43
SF3B3-214ENST00000572365 OR14A2Q96R54 314 aa6.1□□□□□ -1.43
SF3B3-214ENST00000572365 CPEB1Q9BZB8 566 aaKnown RBP6.1□□□□□ -1.43
SF3B3-214ENST00000572365 UNKQ9C0B0 810 aaKnown RBP6.1□□□□□ -1.43
SF3B3-214ENST00000572365 ADAM7Q9H2U9 754 aa6.1□□□□□ -1.43
SF3B3-214ENST00000572365 MFSD1Q9H3U5 465 aa6.1□□□□□ -1.43
SF3B3-214ENST00000572365 BRD9Q9H8M2 597 aa6.1□□□□□ -1.43
SF3B3-214ENST00000572365 GPR35Q9HC97 309 aa6.1□□□□□ -1.43
SF3B3-214ENST00000572365 A1CFQ9NQ94 594 aaKnown RBP6.1□□□□□ -1.43
SF3B3-214ENST00000572365 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.1□□□□□ -1.43
SF3B3-214ENST00000572365 FBXO34Q9NWN3 711 aa6.1□□□□□ -1.43
SF3B3-214ENST00000572365 FNIP2Q9P278 1114 aa6.1□□□□□ -1.43
SF3B3-214ENST00000572365 CPNE7Q9UBL6 633 aa6.1□□□□□ -1.43
SF3B3-214ENST00000572365 CORO2BQ9UQ03 480 aa6.1□□□□□ -1.43
SF3B3-214ENST00000572365 HDAC5Q9UQL6 1122 aa6.1□□□□□ -1.43
SF3B3-214ENST00000572365 SH3BP1Q9Y3L3 701 aa6.1□□□□□ -1.43
SF3B3-214ENST00000572365 DAAM1Q9Y4D1 1078 aa6.1□□□□□ -1.43
SF3B3-214ENST00000572365 PLXNA4Q9HCM2 1894 aa6.1□□□□□ -1.43
SF3B3-214ENST00000572365 CNOT1A5YKK6 2376 aaKnown RBP6.1□□□□□ -1.43
SF3B3-214ENST00000572365 KIAA1671Q9BY89 1806 aa6.09□□□□□ -1.43
SF3B3-214ENST00000572365 PRR5-ARHGAP8B1AHC4 643 aa6.09□□□□□ -1.43
SF3B3-214ENST00000572365 F5H6K3 240 aa6.09□□□□□ -1.43
SF3B3-214ENST00000572365 KPNA5O15131 536 aa6.09□□□□□ -1.43
SF3B3-214ENST00000572365 IPO13O94829 963 aaKnown RBP6.09□□□□□ -1.43
SF3B3-214ENST00000572365 GLP2RO95838 553 aa6.09□□□□□ -1.43
SF3B3-214ENST00000572365 NDUFB10O96000 172 aa6.09□□□□□ -1.43
SF3B3-214ENST00000572365 PLATP00750 562 aa6.09□□□□□ -1.43
SF3B3-214ENST00000572365 WEE2P0C1S8 567 aa6.09□□□□□ -1.43
SF3B3-214ENST00000572365 ZSCAN22P10073 491 aaPredicted RBP6.09□□□□□ -1.43
SF3B3-214ENST00000572365 BRAFP15056 766 aa6.09□□□□□ -1.43
SF3B3-214ENST00000572365 ATXN1P54253 815 aaKnown RBP6.09□□□□□ -1.43
SF3B3-214ENST00000572365 SUMO3P55854 103 aaPredicted RBP6.09□□□□□ -1.43
SF3B3-214ENST00000572365 HTRA4P83105 476 aaPredicted RBP6.09□□□□□ -1.43
SF3B3-214ENST00000572365 KLRC3Q07444 240 aa6.09□□□□□ -1.43
SF3B3-214ENST00000572365 ZNF543Q08ER8 600 aa6.09□□□□□ -1.43
SF3B3-214ENST00000572365 FOXL1Q12952 345 aa6.09□□□□□ -1.43
SF3B3-214ENST00000572365 G3BP1Q13283 466 aaKnown RBP eCLIP6.09□□□□□ -1.432e-7■■□□□ 13.5
SF3B3-214ENST00000572365 ANGPT1Q15389 498 aa6.09□□□□□ -1.43
SF3B3-214ENST00000572365 DUSP28Q4G0W2 176 aa6.09□□□□□ -1.43
SF3B3-214ENST00000572365 CCDC158Q5M9N0 1113 aa6.09□□□□□ -1.43
SF3B3-214ENST00000572365 ZFYVE27Q5T4F4 411 aa6.09□□□□□ -1.43
SF3B3-214ENST00000572365 C10orf62Q5T681 223 aaPredicted RBP6.09□□□□□ -1.43
SF3B3-214ENST00000572365 ATXN7L2Q5T6C5 722 aaPredicted RBP6.09□□□□□ -1.43
SF3B3-214ENST00000572365 TCTN3Q6NUS6 607 aa6.09□□□□□ -1.43
SF3B3-214ENST00000572365 XRRA1Q6P2D8 792 aa6.09□□□□□ -1.43
SF3B3-214ENST00000572365 SESTD1Q86VW0 696 aa6.09□□□□□ -1.43
SF3B3-214ENST00000572365 LCORLQ8N3X6 602 aa6.09□□□□□ -1.43
SF3B3-214ENST00000572365 OR2C3Q8N628 320 aa6.09□□□□□ -1.43
SF3B3-214ENST00000572365 GIMAP8Q8ND71 665 aaPredicted RBP6.09□□□□□ -1.43
SF3B3-214ENST00000572365 OR6B3Q8NGW1 331 aa6.09□□□□□ -1.43
SF3B3-214ENST00000572365 CYP2W1Q8TAV3 490 aa6.09□□□□□ -1.43
SF3B3-214ENST00000572365 FEZF2Q8TBJ5 459 aa6.09□□□□□ -1.43
SF3B3-214ENST00000572365 ARPC5LQ9BPX5 153 aa6.09□□□□□ -1.43
SF3B3-214ENST00000572365 CPPED1Q9BRF8 314 aaPredicted RBP6.09□□□□□ -1.43
SF3B3-214ENST00000572365 XYLT2Q9H1B5 865 aa6.09□□□□□ -1.43
SF3B3-214ENST00000572365 GSTO2Q9H4Y5 243 aa6.09□□□□□ -1.43
SF3B3-214ENST00000572365 SLAMF7Q9NQ25 335 aa6.09□□□□□ -1.43
SF3B3-214ENST00000572365 RNF146Q9NTX7 359 aa6.09□□□□□ -1.43
SF3B3-214ENST00000572365 HDAC6Q9UBN7 1215 aa6.09□□□□□ -1.43
SF3B3-214ENST00000572365 CLIP2Q9UDT6 1046 aa6.09□□□□□ -1.43
SF3B3-214ENST00000572365 DMTF1Q9Y222 760 aa6.09□□□□□ -1.43
SF3B3-214ENST00000572365 SNX13Q9Y5W8 968 aa6.09□□□□□ -1.43
SF3B3-214ENST00000572365 GCN1Q92616 2671 aaKnown RBP6.08□□□□□ -1.44
SF3B3-214ENST00000572365 FLNBO75369 2602 aaKnown RBP6.08□□□□□ -1.44
SF3B3-214ENST00000572365 DSPP15924 2871 aaKnown RBP6.08□□□□□ -1.44
SF3B3-214ENST00000572365 PNMA6EA0A0J9YXQ4 647 aa6.08□□□□□ -1.44
SF3B3-214ENST00000572365 ASB14A6NK59 587 aa6.08□□□□□ -1.44
SF3B3-214ENST00000572365 IFRD1O00458 451 aaPredicted RBP6.08□□□□□ -1.44
SF3B3-214ENST00000572365 MFAP3LO75121 409 aa6.08□□□□□ -1.44
SF3B3-214ENST00000572365 LMNAP02545 664 aaKnown RBP6.08□□□□□ -1.44
SF3B3-214ENST00000572365 CXCL10P02778 98 aa6.08□□□□□ -1.44
SF3B3-214ENST00000572365 SETSIPP0DME0 302 aa6.08□□□□□ -1.44
SF3B3-214ENST00000572365 BMP7P18075 431 aa6.08□□□□□ -1.44
SF3B3-214ENST00000572365 ICAM3P32942 547 aa6.08□□□□□ -1.44
SF3B3-214ENST00000572365 MSX2P35548 267 aaPredicted RBP6.08□□□□□ -1.44
SF3B3-214ENST00000572365 BMPR1AP36894 532 aa6.08□□□□□ -1.44
SF3B3-214ENST00000572365 THPOP40225 353 aa6.08□□□□□ -1.44
SF3B3-214ENST00000572365 NOMO3P69849 1222 aa6.08□□□□□ -1.44
SF3B3-214ENST00000572365 HABP2Q14520 560 aaPredicted RBP6.08□□□□□ -1.44
SF3B3-214ENST00000572365 ELAVL1Q15717 326 aaKnown RBP6.08□□□□□ -1.44
SF3B3-214ENST00000572365 EFCAB12Q6NXP0 572 aa6.08□□□□□ -1.44
SF3B3-214ENST00000572365 NFRKBQ6P4R8 1299 aa6.08□□□□□ -1.44
SF3B3-214ENST00000572365 RASGRP2Q7LDG7 609 aa6.08□□□□□ -1.44
SF3B3-214ENST00000572365 ELOA2Q8IYF1 753 aaPredicted RBP6.08□□□□□ -1.44
SF3B3-214ENST00000572365 FUKQ8N0W3 1084 aa6.08□□□□□ -1.44
SF3B3-214ENST00000572365 AOPEPQ8N6M6 819 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms