RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 SART1O43290 800 aaKnown RBP15.23■□□□□ 0.03
FANCA-220ENST00000566409 IGLV3-25P01717 112 aa15.23■□□□□ 0.03
FANCA-220ENST00000566409 PRKCSHP14314 528 aaPredicted RBP15.23■□□□□ 0.03
FANCA-220ENST00000566409 PRKCHP24723 683 aa15.23■□□□□ 0.03
FANCA-220ENST00000566409 YWHAZP63104 245 aaKnown RBP15.23■□□□□ 0.03
FANCA-220ENST00000566409 NNTQ13423 1086 aa15.23■□□□□ 0.03
FANCA-220ENST00000566409 BYSLQ13895 437 aaKnown RBP15.23■□□□□ 0.03
FANCA-220ENST00000566409 KCNJ12Q14500 433 aa15.23■□□□□ 0.03
FANCA-220ENST00000566409 EIF4HQ15056 248 aaKnown RBP15.23■□□□□ 0.03
FANCA-220ENST00000566409 STPG1Q5TH74 334 aa15.23■□□□□ 0.03
FANCA-220ENST00000566409 RBM43Q6ZSC3 357 aaKnown RBP15.23■□□□□ 0.03
FANCA-220ENST00000566409 CYP2U1Q7Z449 544 aa15.23■□□□□ 0.03
FANCA-220ENST00000566409 FAM114A1Q8IWE2 563 aa15.23■□□□□ 0.03
FANCA-220ENST00000566409 FAM71AQ8IYT1 594 aa15.23■□□□□ 0.03
FANCA-220ENST00000566409 DEFB119Q8N690 84 aa15.23■□□□□ 0.03
FANCA-220ENST00000566409 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.23■□□□□ 0.03
FANCA-220ENST00000566409 PIGKQ92643 395 aa15.23■□□□□ 0.03
FANCA-220ENST00000566409 LMLNQ96KR4 655 aa15.23■□□□□ 0.03
FANCA-220ENST00000566409 PRICKLE1Q96MT3 831 aaPredicted RBP15.23■□□□□ 0.03
FANCA-220ENST00000566409 CIPCQ9C0C6 399 aa15.23■□□□□ 0.03
FANCA-220ENST00000566409 ABCB8Q9NUT2 735 aa15.23■□□□□ 0.03
FANCA-220ENST00000566409 XPO7Q9UIA9 1087 aaKnown RBP15.23■□□□□ 0.03
FANCA-220ENST00000566409 CYP8B1Q9UNU6 501 aa15.23■□□□□ 0.03
FANCA-220ENST00000566409 NPC1O15118 1278 aa15.22■□□□□ 0.03
FANCA-220ENST00000566409 TIMM44O43615 452 aa15.22■□□□□ 0.03
FANCA-220ENST00000566409 TBL1XO60907 577 aa15.22■□□□□ 0.03
FANCA-220ENST00000566409 CD70P32970 193 aa15.22■□□□□ 0.03
FANCA-220ENST00000566409 SLC11A2P49281 568 aa15.22■□□□□ 0.03
FANCA-220ENST00000566409 ZNF445P59923 1031 aa15.22■□□□□ 0.03
FANCA-220ENST00000566409 RPS24P62847 133 aaKnown RBP15.22■□□□□ 0.03
FANCA-220ENST00000566409 IRX4P78413 519 aa15.22■□□□□ 0.03
FANCA-220ENST00000566409 PTPRNQ16849 979 aa15.22■□□□□ 0.03
FANCA-220ENST00000566409 TCP11X2Q5H9J9 407 aa15.22■□□□□ 0.03
FANCA-220ENST00000566409 CT47A1Q5JQC4 288 aaPredicted RBP15.22■□□□□ 0.03
FANCA-220ENST00000566409 SPDYCQ5MJ68 293 aa15.22■□□□□ 0.03
FANCA-220ENST00000566409 MPP7Q5T2T1 576 aa15.22■□□□□ 0.03
FANCA-220ENST00000566409 KLHDC7AQ5VTJ3 777 aa15.22■□□□□ 0.03
FANCA-220ENST00000566409 CYB5D2Q8WUJ1 264 aa15.22■□□□□ 0.03
FANCA-220ENST00000566409 PPP1R13BQ96KQ4 1090 aa15.22■□□□□ 0.03
FANCA-220ENST00000566409 SERPINB11Q96P15 392 aa15.22■□□□□ 0.03
FANCA-220ENST00000566409 NAA15Q9BXJ9 866 aaKnown RBP15.22■□□□□ 0.03
FANCA-220ENST00000566409 NUCKS1Q9H1E3 243 aaKnown RBP15.22■□□□□ 0.03
FANCA-220ENST00000566409 LHX5Q9H2C1 402 aa15.22■□□□□ 0.03
FANCA-220ENST00000566409 POPDC2Q9HBU9 364 aa15.22■□□□□ 0.03
FANCA-220ENST00000566409 PLCB1Q9NQ66 1216 aa15.22■□□□□ 0.03
FANCA-220ENST00000566409 DACH1Q9UI36 760 aa15.22■□□□□ 0.03
FANCA-220ENST00000566409 FHOD1Q9Y613 1164 aa15.22■□□□□ 0.03
FANCA-220ENST00000566409 KNL1Q8NG31 2342 aa15.22■□□□□ 0.03
FANCA-220ENST00000566409 EPG5Q9HCE0 2579 aa15.22■□□□□ 0.03
FANCA-220ENST00000566409 IRAK2O43187 625 aa15.21■□□□□ 0.03
FANCA-220ENST00000566409 TRUB2O95900 331 aaKnown RBP15.21■□□□□ 0.03
FANCA-220ENST00000566409 HLA-EP13747 358 aa15.21■□□□□ 0.03
FANCA-220ENST00000566409 ITPKAP23677 461 aa15.21■□□□□ 0.03
FANCA-220ENST00000566409 COPAP53621 1224 aa15.21■□□□□ 0.03
FANCA-220ENST00000566409 RPL6Q02878 288 aaKnown RBP15.21■□□□□ 0.03
FANCA-220ENST00000566409 PTK2Q05397 1052 aa15.21■□□□□ 0.03
FANCA-220ENST00000566409 DRAP1Q14919 205 aaPredicted RBP15.21■□□□□ 0.03
FANCA-220ENST00000566409 ZC3H12AQ5D1E8 599 aaKnown RBP15.21■□□□□ 0.03
FANCA-220ENST00000566409 MS4A13Q5J8X5 152 aa15.21■□□□□ 0.03
FANCA-220ENST00000566409 PEAR1Q5VY43 1037 aaPredicted RBP15.21■□□□□ 0.03
FANCA-220ENST00000566409 SMYD5Q6GMV2 418 aa15.21■□□□□ 0.03
FANCA-220ENST00000566409 CHST9Q7L1S5 443 aa15.21■□□□□ 0.03
FANCA-220ENST00000566409 SLC41A1Q8IVJ1 513 aa15.21■□□□□ 0.03
FANCA-220ENST00000566409 C1orf131Q8NDD1 294 aaKnown RBP15.21■□□□□ 0.03
FANCA-220ENST00000566409 ENOX1Q8TC92 643 aaKnown RBP15.21■□□□□ 0.03
FANCA-220ENST00000566409 UCMAQ8WVF2 138 aa15.21■□□□□ 0.03
FANCA-220ENST00000566409 SLC2A13Q96QE2 648 aa15.21■□□□□ 0.03
FANCA-220ENST00000566409 IRX2Q9BZI1 471 aaPredicted RBP15.21■□□□□ 0.03
FANCA-220ENST00000566409 TMEM245Q9H330 911 aa15.21■□□□□ 0.03
FANCA-220ENST00000566409 PRDM16Q9HAZ2 1276 aa15.21■□□□□ 0.03
FANCA-220ENST00000566409 GGA2Q9UJY4 613 aa15.21■□□□□ 0.03
FANCA-220ENST00000566409 PILRBQ9UKJ0 227 aa15.21■□□□□ 0.03
FANCA-220ENST00000566409 NFE2L3Q9Y4A8 694 aa15.21■□□□□ 0.03
FANCA-220ENST00000566409 ATXN2Q99700 1313 aaKnown RBP15.2■□□□□ 0.02
FANCA-220ENST00000566409 CDX4O14627 284 aaPredicted RBP15.2■□□□□ 0.02
FANCA-220ENST00000566409 CAPN9O14815 690 aa15.2■□□□□ 0.02
FANCA-220ENST00000566409 KHNYNO15037 678 aaKnown RBP15.2■□□□□ 0.02
FANCA-220ENST00000566409 ZNF217O75362 1048 aa15.2■□□□□ 0.02
FANCA-220ENST00000566409 GRAP2O75791 330 aa15.2■□□□□ 0.02
FANCA-220ENST00000566409 ERBB2P04626 1255 aa15.2■□□□□ 0.02
FANCA-220ENST00000566409 PABPC1P11940 636 aaKnown RBP15.2■□□□□ 0.02
FANCA-220ENST00000566409 EEF1GP26641 437 aaKnown RBP15.2■□□□□ 0.02
FANCA-220ENST00000566409 STARD3Q14849 445 aa15.2■□□□□ 0.02
FANCA-220ENST00000566409 PTPN20Q4JDL3 420 aa15.2■□□□□ 0.02
FANCA-220ENST00000566409 DCAF6Q58WW2 860 aa15.2■□□□□ 0.02
FANCA-220ENST00000566409 FSCBQ5H9T9 825 aa15.2■□□□□ 0.02
FANCA-220ENST00000566409 PPM1JQ5JR12 505 aa15.2■□□□□ 0.02
FANCA-220ENST00000566409 CDKAL1Q5VV42 579 aa15.2■□□□□ 0.02
FANCA-220ENST00000566409 LYSMD4Q5XG99 296 aa15.2■□□□□ 0.02
FANCA-220ENST00000566409 MBLAC2Q68D91 279 aa15.2■□□□□ 0.02
FANCA-220ENST00000566409 OLFML1Q6UWY5 402 aa15.2■□□□□ 0.02
FANCA-220ENST00000566409 KIAA1324Q6UXG2 1013 aaKnown RBP15.2■□□□□ 0.02
FANCA-220ENST00000566409 FAM183BPQ6ZVS7 135 aa15.2■□□□□ 0.02
FANCA-220ENST00000566409 METTL3Q86U44 580 aaKnown RBP15.2■□□□□ 0.02
FANCA-220ENST00000566409 TMPRSS6Q8IU80 811 aa15.2■□□□□ 0.02
FANCA-220ENST00000566409 SYT12Q8IV01 421 aa15.2■□□□□ 0.02
FANCA-220ENST00000566409 DEFB106AQ8N104 65 aa15.2■□□□□ 0.02
FANCA-220ENST00000566409 CFAP52Q8N1V2 620 aa15.2■□□□□ 0.02
FANCA-220ENST00000566409 ZNF366Q8N895 744 aa15.2■□□□□ 0.02
FANCA-220ENST00000566409 FIBINQ8TAL6 211 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms