RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 YWHAZP63104 245 aaKnown RBP9.73□□□□□ -0.85
YBX3-218ENST00000546298 PTK2Q05397 1052 aa9.73□□□□□ -0.85
YBX3-218ENST00000546298 EXOC3L4Q17RC7 722 aa9.73□□□□□ -0.85
YBX3-218ENST00000546298 UAP1L1Q3KQV9 507 aa9.73□□□□□ -0.85
YBX3-218ENST00000546298 FNDC3BQ53EP0 1204 aaKnown RBP9.73□□□□□ -0.85
YBX3-218ENST00000546298 PIK3R6Q5UE93 754 aa9.73□□□□□ -0.85
YBX3-218ENST00000546298 MBLAC2Q68D91 279 aa9.73□□□□□ -0.85
YBX3-218ENST00000546298 DENND1BQ6P3S1 775 aa9.73□□□□□ -0.85
YBX3-218ENST00000546298 TMEM110Q86TL2 294 aa9.73□□□□□ -0.85
YBX3-218ENST00000546298 MFN1Q8IWA4 741 aa9.73□□□□□ -0.85
YBX3-218ENST00000546298 RGL4Q8IZJ4 473 aa9.73□□□□□ -0.85
YBX3-218ENST00000546298 HDDC3Q8N4P3 179 aa9.73□□□□□ -0.85
YBX3-218ENST00000546298 DEFB119Q8N690 84 aa9.73□□□□□ -0.85
YBX3-218ENST00000546298 CADM4Q8NFZ8 388 aa9.73□□□□□ -0.85
YBX3-218ENST00000546298 OR2T3Q8NH03 318 aa9.73□□□□□ -0.85
YBX3-218ENST00000546298 CLEC4CQ8WTT0 213 aa9.73□□□□□ -0.85
YBX3-218ENST00000546298 ERLEC1Q96DZ1 483 aa9.73□□□□□ -0.85
YBX3-218ENST00000546298 HSPA12BQ96MM6 686 aa9.73□□□□□ -0.85
YBX3-218ENST00000546298 NOX5Q96PH1 765 aa9.73□□□□□ -0.85
YBX3-218ENST00000546298 NUP58Q9BVL2 599 aa9.73□□□□□ -0.85
YBX3-218ENST00000546298 SLC32A1Q9H598 525 aa9.73□□□□□ -0.85
YBX3-218ENST00000546298 THAP9Q9H5L6 903 aa9.73□□□□□ -0.85
YBX3-218ENST00000546298 ABCB8Q9NUT2 735 aa9.73□□□□□ -0.85
YBX3-218ENST00000546298 WSB2Q9NYS7 404 aaPredicted RBP9.73□□□□□ -0.85
YBX3-218ENST00000546298 APEX2Q9UBZ4 518 aa9.73□□□□□ -0.85
YBX3-218ENST00000546298 SUN2Q9UH99 717 aa9.73□□□□□ -0.85
YBX3-218ENST00000546298 SLC12A6Q9UHW9 1150 aa9.73□□□□□ -0.85
YBX3-218ENST00000546298 NAALADL1Q9UQQ1 740 aa9.73□□□□□ -0.85
YBX3-218ENST00000546298 NFE2L3Q9Y4A8 694 aa9.73□□□□□ -0.85
YBX3-218ENST00000546298 ATG2BQ96BY7 2078 aa9.73□□□□□ -0.85
YBX3-218ENST00000546298 NCOR2Q9Y618 2525 aa9.73□□□□□ -0.85
YBX3-218ENST00000546298 GOLGA6L7A0A1B0GV03 622 aa9.72□□□□□ -0.85
YBX3-218ENST00000546298 MEI4A8MW99 385 aa9.72□□□□□ -0.85
YBX3-218ENST00000546298 MOCS3O95396 460 aa9.72□□□□□ -0.85
YBX3-218ENST00000546298 CALCAP01258 141 aa9.72□□□□□ -0.85
YBX3-218ENST00000546298 ASLP04424 464 aa9.72□□□□□ -0.85
YBX3-218ENST00000546298 GLI1P08151 1106 aa9.72□□□□□ -0.85
YBX3-218ENST00000546298 DLDP09622 509 aaKnown RBP9.72□□□□□ -0.85
YBX3-218ENST00000546298 SLC2A3P11169 496 aa9.72□□□□□ -0.85
YBX3-218ENST00000546298 PRKCHP24723 683 aa9.72□□□□□ -0.85
YBX3-218ENST00000546298 MAPK8P45983 427 aa9.72□□□□□ -0.85
YBX3-218ENST00000546298 TPMTP51580 245 aa9.72□□□□□ -0.85
YBX3-218ENST00000546298 BPIFB4P59827 614 aa9.72□□□□□ -0.85
YBX3-218ENST00000546298 ST8SIA6P61647 398 aa9.72□□□□□ -0.85
YBX3-218ENST00000546298 CDK17Q00537 523 aa9.72□□□□□ -0.85
YBX3-218ENST00000546298 ZBTB16Q05516 673 aa9.72□□□□□ -0.85
YBX3-218ENST00000546298 SFSWAPQ12872 951 aaKnown RBP9.72□□□□□ -0.85
YBX3-218ENST00000546298 MTA1Q13330 715 aa9.72□□□□□ -0.85
YBX3-218ENST00000546298 CAMK2GQ13555 558 aaPredicted RBP9.72□□□□□ -0.85
YBX3-218ENST00000546298 MAN2A1Q16706 1144 aa9.72□□□□□ -0.85
YBX3-218ENST00000546298 ARHGAP44Q17R89 818 aa9.72□□□□□ -0.85
YBX3-218ENST00000546298 CT47A1Q5JQC4 288 aaPredicted RBP9.72□□□□□ -0.85
YBX3-218ENST00000546298 EFHC1Q5JVL4 640 aa9.72□□□□□ -0.85
YBX3-218ENST00000546298 SH3PXD2AQ5TCZ1 1133 aa9.72□□□□□ -0.85
YBX3-218ENST00000546298 TMEM215Q68D42 235 aa9.72□□□□□ -0.85
YBX3-218ENST00000546298 PSAPL1Q6NUJ1 521 aa9.72□□□□□ -0.85
YBX3-218ENST00000546298 RFWD3Q6PCD5 774 aa9.72□□□□□ -0.85
YBX3-218ENST00000546298 KIAA0907Q7Z7F0 614 aaPredicted RBP9.72□□□□□ -0.85
YBX3-218ENST00000546298 ADIPOR2Q86V24 386 aa9.72□□□□□ -0.85
YBX3-218ENST00000546298 SLC41A1Q8IVJ1 513 aa9.72□□□□□ -0.85
YBX3-218ENST00000546298 FIBINQ8TAL6 211 aa9.72□□□□□ -0.85
YBX3-218ENST00000546298 SORCS1Q8WY21 1168 aa9.72□□□□□ -0.85
YBX3-218ENST00000546298 SHC3Q92529 594 aa9.72□□□□□ -0.85
YBX3-218ENST00000546298 TOE1Q96GM8 510 aaKnown RBP9.72□□□□□ -0.85
YBX3-218ENST00000546298 SLC39A13Q96H72 371 aa9.72□□□□□ -0.85
YBX3-218ENST00000546298 FCRL2Q96LA5 508 aaPredicted RBP9.72□□□□□ -0.85
YBX3-218ENST00000546298 GTPBP2Q9BX10 602 aaKnown RBP9.72□□□□□ -0.85
YBX3-218ENST00000546298 MKRN2Q9H000 416 aaKnown RBP9.72□□□□□ -0.85
YBX3-218ENST00000546298 PCED1AQ9H1Q7 454 aa9.72□□□□□ -0.85
YBX3-218ENST00000546298 SLC6A17Q9H1V8 727 aa9.72□□□□□ -0.85
YBX3-218ENST00000546298 CLSTN2Q9H4D0 955 aa9.72□□□□□ -0.85
YBX3-218ENST00000546298 POPDC2Q9HBU9 364 aa9.72□□□□□ -0.85
YBX3-218ENST00000546298 CAPN10Q9HC96 672 aa9.72□□□□□ -0.85
YBX3-218ENST00000546298 ASNSD1Q9NWL6 643 aa9.72□□□□□ -0.85
YBX3-218ENST00000546298 STIM2Q9P246 746 aa9.72□□□□□ -0.85
YBX3-218ENST00000546298 USP36Q9P275 1121 aaKnown RBP9.72□□□□□ -0.85
YBX3-218ENST00000546298 TJP2Q9UDY2 1190 aa9.72□□□□□ -0.85
YBX3-218ENST00000546298 ANGPTL2Q9UKU9 493 aa9.72□□□□□ -0.85
YBX3-218ENST00000546298 ZNF292O60281 2723 aa9.72□□□□□ -0.85
YBX3-218ENST00000546298 SPTBN2O15020 2390 aa9.71□□□□□ -0.85
YBX3-218ENST00000546298 METTL12A8MUP2 240 aa9.71□□□□□ -0.86
YBX3-218ENST00000546298 UPK3BL1B0FP48 263 aa9.71□□□□□ -0.86
YBX3-218ENST00000546298 UPK3BL2E5RIL1 263 aa9.71□□□□□ -0.86
YBX3-218ENST00000546298 E5RJQ4 531 aa9.71□□□□□ -0.86
YBX3-218ENST00000546298 ARHGAP33O14559 1287 aa9.71□□□□□ -0.86
YBX3-218ENST00000546298 PAPSS1O43252 624 aaPredicted RBP9.71□□□□□ -0.86
YBX3-218ENST00000546298 OPHN1O60890 802 aa9.71□□□□□ -0.86
YBX3-218ENST00000546298 TRUB2O95900 331 aaKnown RBP9.71□□□□□ -0.86
YBX3-218ENST00000546298 IGLV3-19P01714 112 aa9.71□□□□□ -0.86
YBX3-218ENST00000546298 FYNP06241 537 aa9.71□□□□□ -0.86
YBX3-218ENST00000546298 PON1P27169 355 aa9.71□□□□□ -0.86
YBX3-218ENST00000546298 PMLP29590 882 aa9.71□□□□□ -0.86
YBX3-218ENST00000546298 SLC6A4P31645 630 aa9.71□□□□□ -0.86
YBX3-218ENST00000546298 KRT9P35527 623 aa9.71□□□□□ -0.86
YBX3-218ENST00000546298 SHC2P98077 582 aa9.71□□□□□ -0.86
YBX3-218ENST00000546298 PDCLQ13371 301 aa9.71□□□□□ -0.86
YBX3-218ENST00000546298 CDH18Q13634 790 aa9.71□□□□□ -0.86
YBX3-218ENST00000546298 HNRNPDQ14103 355 aaKnown RBP9.71□□□□□ -0.86
YBX3-218ENST00000546298 PLEKHG6Q3KR16 790 aa9.71□□□□□ -0.86
YBX3-218ENST00000546298 TTC31Q49AM3 519 aaPredicted RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms