RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 BYSLQ13895 437 aaKnown RBP10.12□□□□□ -0.79
TNFRSF1A-214ENST00000543048 TAF5Q15542 800 aa10.12□□□□□ -0.79
TNFRSF1A-214ENST00000543048 PIK3R6Q5UE93 754 aa10.12□□□□□ -0.79
TNFRSF1A-214ENST00000543048 SYPL2Q5VXT5 272 aa10.12□□□□□ -0.79
TNFRSF1A-214ENST00000543048 EGFLAMQ63HQ2 1017 aa10.12□□□□□ -0.79
TNFRSF1A-214ENST00000543048 OR6B2Q6IFH4 312 aa10.12□□□□□ -0.79
TNFRSF1A-214ENST00000543048 ANO7Q6IWH7 933 aa10.12□□□□□ -0.79
TNFRSF1A-214ENST00000543048 KBTBD6Q86V97 674 aa10.12□□□□□ -0.79
TNFRSF1A-214ENST00000543048 C11orf74Q86VG3 221 aa10.12□□□□□ -0.79
TNFRSF1A-214ENST00000543048 PACS2Q86VP3 889 aa10.12□□□□□ -0.79
TNFRSF1A-214ENST00000543048 PASD1Q8IV76 773 aa10.12□□□□□ -0.79
TNFRSF1A-214ENST00000543048 CHPFQ8IZ52 775 aa10.12□□□□□ -0.79
TNFRSF1A-214ENST00000543048 PGBD3Q8N328 593 aa10.12□□□□□ -0.79
TNFRSF1A-214ENST00000543048 TMEM35BQ8NCS4 154 aa10.12□□□□□ -0.79
TNFRSF1A-214ENST00000543048 DQX1Q8TE96 717 aaKnown RBP10.12□□□□□ -0.79
TNFRSF1A-214ENST00000543048 FCRL2Q96LA5 508 aaPredicted RBP10.12□□□□□ -0.79
TNFRSF1A-214ENST00000543048 CPXM1Q96SM3 734 aa10.12□□□□□ -0.79
TNFRSF1A-214ENST00000543048 NAT10Q9H0A0 1025 aaKnown RBP10.12□□□□□ -0.79
TNFRSF1A-214ENST00000543048 ASNSD1Q9NWL6 643 aa10.12□□□□□ -0.79
TNFRSF1A-214ENST00000543048 ELOVL2Q9NXB9 296 aa10.12□□□□□ -0.79
TNFRSF1A-214ENST00000543048 TMEM63CQ9P1W3 806 aa10.12□□□□□ -0.79
TNFRSF1A-214ENST00000543048 SLC12A6Q9UHW9 1150 aa10.12□□□□□ -0.79
TNFRSF1A-214ENST00000543048 CLEC4EQ9ULY5 219 aa10.12□□□□□ -0.79
TNFRSF1A-214ENST00000543048 CEP83Q9Y592 693 aa10.12□□□□□ -0.79
TNFRSF1A-214ENST00000543048 FHOD1Q9Y613 1164 aa10.12□□□□□ -0.79
TNFRSF1A-214ENST00000543048 GOLGA6L7A0A1B0GV03 622 aa10.11□□□□□ -0.79
TNFRSF1A-214ENST00000543048 DCLK1O15075 740 aa10.11□□□□□ -0.79
TNFRSF1A-214ENST00000543048 TRUB2O95900 331 aaKnown RBP10.11□□□□□ -0.79
TNFRSF1A-214ENST00000543048 HOXB2P14652 356 aa10.11□□□□□ -0.79
TNFRSF1A-214ENST00000543048 CYP11B1P15538 503 aa10.11□□□□□ -0.79
TNFRSF1A-214ENST00000543048 GBP1P32455 592 aa10.11□□□□□ -0.79
TNFRSF1A-214ENST00000543048 CDK17Q00537 523 aa10.11□□□□□ -0.79
TNFRSF1A-214ENST00000543048 SLC6A3Q01959 620 aa10.11□□□□□ -0.79
TNFRSF1A-214ENST00000543048 TYRO3Q06418 890 aa10.11□□□□□ -0.79
TNFRSF1A-214ENST00000543048 SPEM2Q0P670 501 aa10.11□□□□□ -0.79
TNFRSF1A-214ENST00000543048 GEN1Q17RS7 908 aa10.11□□□□□ -0.79
TNFRSF1A-214ENST00000543048 PLK5Q496M5 336 aa10.11□□□□□ -0.79
TNFRSF1A-214ENST00000543048 DCAF6Q58WW2 860 aa10.11□□□□□ -0.79
TNFRSF1A-214ENST00000543048 MPP7Q5T2T1 576 aa10.11□□□□□ -0.79
TNFRSF1A-214ENST00000543048 ANKS1BQ7Z6G8 1248 aa10.11□□□□□ -0.79
TNFRSF1A-214ENST00000543048 ZDHHC17Q8IUH5 632 aa10.11□□□□□ -0.79
TNFRSF1A-214ENST00000543048 DEFB106AQ8N104 65 aa10.11□□□□□ -0.79
TNFRSF1A-214ENST00000543048 OLIG1Q8TAK6 271 aa10.11□□□□□ -0.79
TNFRSF1A-214ENST00000543048 ADAM32Q8TC27 787 aa10.11□□□□□ -0.79
TNFRSF1A-214ENST00000543048 HMGB4Q8WW32 186 aa10.11□□□□□ -0.79
TNFRSF1A-214ENST00000543048 SLC39A13Q96H72 371 aa10.11□□□□□ -0.79
TNFRSF1A-214ENST00000543048 ACOX2Q99424 681 aa10.11□□□□□ -0.79
TNFRSF1A-214ENST00000543048 TPSD1Q9BZJ3 242 aa10.11□□□□□ -0.79
TNFRSF1A-214ENST00000543048 DUSP15Q9H1R2 295 aaPredicted RBP10.11□□□□□ -0.79
TNFRSF1A-214ENST00000543048 SYNCQ9H7C4 482 aa10.11□□□□□ -0.79
TNFRSF1A-214ENST00000543048 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.11□□□□□ -0.79
TNFRSF1A-214ENST00000543048 BCCIPQ9P287 314 aaKnown RBP eCLIP10.11□□□□□ -0.79
TNFRSF1A-214ENST00000543048 THAP10Q9P2Z0 257 aaPredicted RBP10.11□□□□□ -0.79
TNFRSF1A-214ENST00000543048 TJP2Q9UDY2 1190 aa10.11□□□□□ -0.79
TNFRSF1A-214ENST00000543048 INVSQ9Y283 1065 aa10.11□□□□□ -0.79
TNFRSF1A-214ENST00000543048 DAAM1Q9Y4D1 1078 aa10.11□□□□□ -0.79
TNFRSF1A-214ENST00000543048 DOCK4Q8N1I0 1966 aa10.11□□□□□ -0.79
TNFRSF1A-214ENST00000543048 TNRC6BQ9UPQ9 1833 aaKnown RBP10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 A0A1W2PQF6 199 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 TCRBV21S2A2A0A5A6 115 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 SMTNL1A8MU46 457 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 PRR5-ARHGAP8B1AHC4 643 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 WASH3PC4AMC7 463 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 TBL1XO60907 577 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 HSF2BPO75031 334 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 EPN2O95208 641 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 IGLV3-25P01717 112 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 APOEP02649 317 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 SLC2A3P11169 496 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 ZNF18P17022 549 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 SDHBP21912 280 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 HOXD9P28356 352 aaPredicted RBP10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 SLC6A4P31645 630 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 CDH5P33151 784 aaPredicted RBP10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 NOS2P35228 1153 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 GABRB2P47870 512 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 ID4P47928 161 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 KLK7P49862 253 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 POLR2FP61218 127 aaKnown RBP10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 ARHGAP8P85298 464 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 UBXN1Q04323 297 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 NCAPHQ15003 741 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 ELF2Q15723 593 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 CSRP2Q16527 193 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 FAM133BQ5BKY9 247 aaKnown RBP10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 ZC3H12AQ5D1E8 599 aaKnown RBP10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 NADSYN1Q6IA69 706 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 RFWD3Q6PCD5 774 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 FAM183BPQ6ZVS7 135 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 TAC4Q86UU9 113 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 ERICH1Q86X53 443 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 ZNF677Q86XU0 584 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 ATP6V0D2Q8N8Y2 350 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 ZNF557Q8N988 423 aaPredicted RBP10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 C1orf131Q8NDD1 294 aaKnown RBP10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 ZNF397Q8NF99 534 aaPredicted RBP10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 MDGA1Q8NFP4 955 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 WFIKKN2Q8TEU8 576 aa10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 IPO4Q8TEX9 1081 aaKnown RBP10.1□□□□□ -0.79
TNFRSF1A-214ENST00000543048 DDX1Q92499 740 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms