RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 FOCADQ5VW36 1801 aa2.42□□□□□ -2.02
TRAV1-1-201ENST00000542354 TRBV23OR9-2A0A075B6M9 112 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 A0A1W2PNU3 283 aaPredicted RBP2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 ARHGEF37A1IGU5 675 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 NOTOA8MTQ0 251 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 K7EQS6 105 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 SGK1O00141 431 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 PRRG1O14668 218 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 FFAR3O14843 346 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 ADAMTS3O15072 1205 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 ATP2C2O75185 946 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 TADA2AO75478 443 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 CYP7B1O75881 506 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 ZNF205O95201 554 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 STBD1O95210 358 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 PRAMEF1O95521 474 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 KLF8O95600 359 aaPredicted RBP2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 PLATP00750 562 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 UQCRFS1P1P0C7P4 283 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 PEPDP12955 493 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 IGFBP6P24592 240 aaPredicted RBP2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 MARK3P27448 753 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 CD6P30203 668 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 OR1D2P34982 312 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 GJA4P35212 333 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 IL15P40933 162 aaPredicted RBP2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 DAB2P98082 770 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 KCNA1Q09470 495 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 GRIK3Q13003 919 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 CAMK2GQ13555 558 aaPredicted RBP2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 CNGB1Q14028 1251 aaPredicted RBP2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 SART3Q15020 963 aaKnown RBP2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 PLCB4Q15147 1175 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 TEAD2Q15562 447 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 PSMD5Q16401 504 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 BBS9Q3SYG4 887 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 LONRF3Q496Y0 759 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 HS1BP3Q53T59 392 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 RRP12Q5JTH9 1297 aaKnown RBP2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 DCAF12L1Q5VU92 463 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 RCSD1Q6JBY9 416 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 CC2D1AQ6P1N0 951 aaPredicted RBP2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 FUT10Q6P4F1 479 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 PRSS55Q6UWB4 352 aaPredicted RBP2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 BNC2Q6ZN30 1099 aaPredicted RBP2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 REC114Q7Z4M0 266 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 ADAT2Q7Z6V5 191 aaKnown RBP2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 B3GNT8Q7Z7M8 397 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 LSRQ86X29 649 aaPredicted RBP2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 CEP97Q8IW35 865 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 WDR63Q8IWG1 891 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 CPA6Q8N4T0 437 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 ALLCQ8N6M5 410 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 IL17RCQ8NAC3 791 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 SLC16A11Q8NCK7 471 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 PHC3Q8NDX5 983 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 SIMC1Q8NDZ2 872 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 SAP25Q8TEE9 199 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 FNIP1Q8TF40 1166 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 ALG3Q92685 438 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 LENG9Q96B70 501 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 SKA1Q96BD8 255 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 PGBD4Q96DM1 585 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 ATXN7L3BQ96GX2 97 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 LCORQ96JN0 433 aaPredicted RBP2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 NEUROD6Q96NK8 337 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 ELF4Q99607 663 aaPredicted RBP2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 LNPKQ9C0E8 428 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 OSBPL2Q9H1P3 480 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 RANBP17Q9H2T7 1088 aaKnown RBP2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 SMARCAD1Q9H4L7 1026 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 HPS4Q9NQG7 708 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 ASAH2Q9NR71 780 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 CCM2LQ9NUG4 571 aaPredicted RBP2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 MARCH5Q9NX47 278 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 ERVK13-1Q9NX77 482 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 IMPACTQ9P2X3 320 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 EIF2B4Q9UI10 523 aaKnown RBP2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 CROTQ9UKG9 612 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 EDARQ9UNE0 448 aa2.41□□□□□ -2.02
TRAV1-1-201ENST00000542354 RP1P56715 2156 aa2.4□□□□□ -2.02
TRAV1-1-201ENST00000542354 CCDC187A0A096LP49 1063 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 A0A1B0GUH1 482 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 ZNF891A8MT65 544 aaPredicted RBP2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 M0R2C6 588 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 OVOL3O00110 214 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 MATN3O15232 486 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 NVLO15381 856 aaKnown RBP2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 ZNF623O75123 536 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 PPP6R2O75170 966 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 MOSPD3O75425 235 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 ALDH1L1O75891 902 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 VENTXO95231 258 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 TTLL1O95922 423 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 CYP2D6P10635 497 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 HSPD1P10809 573 aaKnown RBP2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 ZNF20P17024 532 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 EGR1P18146 543 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 GABRG2P18507 467 aa2.4□□□□□ -2.03
TRAV1-1-201ENST00000542354 MCCP23508 829 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms