RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 TRIM54Q9BYV2 358 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 GTPBP4Q9BZE4 634 aaKnown RBP1.01□□□□□ -2.25
COPB1-212ENST00000534771 ZCWPW1Q9H0M4 648 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 TMX1Q9H3N1 280 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 AAMDCQ9H7C9 122 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 SAP30LQ9HAJ7 183 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 ASNSD1Q9NWL6 643 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 STAP2Q9UGK3 403 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 RIMKLBQ9ULI2 386 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 FZD10Q9ULW2 581 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 TBX22Q9Y458 520 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 SPEF1Q9Y4P9 236 aa1.01□□□□□ -2.25
COPB1-212ENST00000534771 EVPLQ92817 2033 aa1□□□□□ -2.25
COPB1-212ENST00000534771 EMSYQ7Z589 1322 aa1□□□□□ -2.25
COPB1-212ENST00000534771 AQP7P3A6NL99 342 aa1□□□□□ -2.25
COPB1-212ENST00000534771 PYCARD-AS1I3L0S3 204 aa1□□□□□ -2.25
COPB1-212ENST00000534771 RHODO00212 210 aa1□□□□□ -2.25
COPB1-212ENST00000534771 RRP9O43818 475 aaKnown RBP1□□□□□ -2.25
COPB1-212ENST00000534771 MARCH6O60337 910 aa1□□□□□ -2.25
COPB1-212ENST00000534771 LMX1BO60663 402 aa1□□□□□ -2.25
COPB1-212ENST00000534771 SNUPNO95149 360 aaKnown RBP1□□□□□ -2.25
COPB1-212ENST00000534771 IL33O95760 270 aa1□□□□□ -2.25
COPB1-212ENST00000534771 TBX6O95947 436 aaPredicted RBP1□□□□□ -2.25
COPB1-212ENST00000534771 PAK4O96013 591 aaPredicted RBP1□□□□□ -2.25
COPB1-212ENST00000534771 LCATP04180 440 aa1□□□□□ -2.25
COPB1-212ENST00000534771 KITP10721 976 aa1□□□□□ -2.25
COPB1-212ENST00000534771 NPR1P16066 1061 aa1□□□□□ -2.25
COPB1-212ENST00000534771 TPH1P17752 444 aa1□□□□□ -2.25
COPB1-212ENST00000534771 VCAM1P19320 739 aa1□□□□□ -2.25
COPB1-212ENST00000534771 NTSR1P30989 418 aa1□□□□□ -2.25
COPB1-212ENST00000534771 GLIPR1P48060 266 aa1□□□□□ -2.25
COPB1-212ENST00000534771 RFX5P48382 616 aaPredicted RBP1□□□□□ -2.25
COPB1-212ENST00000534771 DGKQP52824 942 aa1□□□□□ -2.25
COPB1-212ENST00000534771 ERVK11-1P61568 191 aa1□□□□□ -2.25
COPB1-212ENST00000534771 RAE1P78406 368 aaKnown RBP1□□□□□ -2.25
COPB1-212ENST00000534771 ARHGEF7Q14155 803 aa1□□□□□ -2.25
COPB1-212ENST00000534771 GPR18Q14330 331 aa1□□□□□ -2.25
COPB1-212ENST00000534771 SLC29A2Q14542 456 aa1□□□□□ -2.25
COPB1-212ENST00000534771 CLCA4Q14CN2 919 aa1□□□□□ -2.25
COPB1-212ENST00000534771 PGM5Q15124 567 aa1□□□□□ -2.25
COPB1-212ENST00000534771 SLC1A5Q15758 541 aa1□□□□□ -2.25
COPB1-212ENST00000534771 ANXA2RQ3ZCQ2 193 aa1□□□□□ -2.25
COPB1-212ENST00000534771 DNTTIP2Q5QJE6 756 aaKnown RBP1□□□□□ -2.25
COPB1-212ENST00000534771 PLEKHA7Q6IQ23 1121 aa1□□□□□ -2.25
COPB1-212ENST00000534771 GRHL2Q6ISB3 625 aa1□□□□□ -2.25
COPB1-212ENST00000534771 DHRS13Q6UX07 377 aa1□□□□□ -2.25
COPB1-212ENST00000534771 DGLUCYQ7Z3D6 616 aa1□□□□□ -2.25
COPB1-212ENST00000534771 EXOC3L1Q86VI1 746 aa1□□□□□ -2.25
COPB1-212ENST00000534771 GPSM1Q86YR5 675 aa1□□□□□ -2.25
COPB1-212ENST00000534771 DENND1CQ8IV53 801 aa1□□□□□ -2.25
COPB1-212ENST00000534771 DDX51Q8N8A6 666 aaKnown RBP eCLIP1□□□□□ -2.25
COPB1-212ENST00000534771 LMNTD1Q8N9Z9 388 aa1□□□□□ -2.25
COPB1-212ENST00000534771 GABPB2Q8TAK5 448 aaPredicted RBP1□□□□□ -2.25
COPB1-212ENST00000534771 ADAMTS14Q8WXS8 1223 aa1□□□□□ -2.25
COPB1-212ENST00000534771 MTMR8Q96EF0 704 aa1□□□□□ -2.25
COPB1-212ENST00000534771 C1GALT1C1Q96EU7 318 aa1□□□□□ -2.25
COPB1-212ENST00000534771 HSPBAP1Q96EW2 488 aa1□□□□□ -2.25
COPB1-212ENST00000534771 ZNF845Q96IR2 970 aaPredicted RBP1□□□□□ -2.25
COPB1-212ENST00000534771 MAP3K14Q99558 947 aa1□□□□□ -2.25
COPB1-212ENST00000534771 TRMT61BQ9BVS5 477 aaKnown RBP1□□□□□ -2.25
COPB1-212ENST00000534771 RNF26Q9BY78 433 aaPredicted RBP1□□□□□ -2.25
COPB1-212ENST00000534771 DPH1Q9BZG8 443 aa1□□□□□ -2.25
COPB1-212ENST00000534771 TRIM2Q9C040 744 aa1□□□□□ -2.25
COPB1-212ENST00000534771 DHX36Q9H2U1 1008 aaKnown RBP1□□□□□ -2.25
COPB1-212ENST00000534771 ABHD16BQ9H3Z7 469 aa1□□□□□ -2.25
COPB1-212ENST00000534771 FAM83DQ9H4H8 585 aa1□□□□□ -2.25
COPB1-212ENST00000534771 MAP6D1Q9H9H5 199 aa1□□□□□ -2.25
COPB1-212ENST00000534771 SMURF2Q9HAU4 748 aa1□□□□□ -2.25
COPB1-212ENST00000534771 ERVK-5Q9HDB9 667 aa1□□□□□ -2.25
COPB1-212ENST00000534771 KRCC1Q9NPI7 259 aaPredicted RBP1□□□□□ -2.25
COPB1-212ENST00000534771 ABHD10Q9NUJ1 306 aa1□□□□□ -2.25
COPB1-212ENST00000534771 DONSONQ9NYP3 566 aa1□□□□□ -2.25
COPB1-212ENST00000534771 TBC1D14Q9P2M4 693 aa1□□□□□ -2.25
COPB1-212ENST00000534771 DKK4Q9UBT3 224 aa1□□□□□ -2.25
COPB1-212ENST00000534771 SLC27A6Q9Y2P4 619 aa1□□□□□ -2.25
COPB1-212ENST00000534771 ATP8A1Q9Y2Q0 1164 aa1□□□□□ -2.25
COPB1-212ENST00000534771 PRKAB1Q9Y478 270 aa1□□□□□ -2.25
COPB1-212ENST00000534771 PAXBP1Q9Y5B6 917 aa1□□□□□ -2.25
COPB1-212ENST00000534771 COL15A1P39059 1388 aa0.99□□□□□ -2.25
COPB1-212ENST00000534771 WASHC2CQ9Y4E1 1318 aa0.99□□□□□ -2.25
COPB1-212ENST00000534771 A0A1B0GU03 582 aa0.99□□□□□ -2.25
COPB1-212ENST00000534771 MBD3L4A6NDZ8 208 aaPredicted RBP0.99□□□□□ -2.25
COPB1-212ENST00000534771 MBD3L3A6NE82 208 aaPredicted RBP0.99□□□□□ -2.25
COPB1-212ENST00000534771 FOXO6A8MYZ6 492 aa0.99□□□□□ -2.25
COPB1-212ENST00000534771 RAB27BO00194 218 aa0.99□□□□□ -2.25
COPB1-212ENST00000534771 KATNA1O75449 491 aa0.99□□□□□ -2.25
COPB1-212ENST00000534771 WDR47O94967 919 aa0.99□□□□□ -2.25
COPB1-212ENST00000534771 NFATC1O95644 943 aa0.99□□□□□ -2.25
COPB1-212ENST00000534771 WNT1P04628 370 aa0.99□□□□□ -2.25
COPB1-212ENST00000534771 RNF224P0DH78 156 aa0.99□□□□□ -2.25
COPB1-212ENST00000534771 KRT5P13647 590 aa0.99□□□□□ -2.25
COPB1-212ENST00000534771 DAOP14920 347 aa0.99□□□□□ -2.25
COPB1-212ENST00000534771 ZNF12P17014 697 aa0.99□□□□□ -2.25
COPB1-212ENST00000534771 BTF3P20290 206 aaKnown RBP0.99□□□□□ -2.25
COPB1-212ENST00000534771 ANOS1P23352 680 aa0.99□□□□□ -2.25
COPB1-212ENST00000534771 YY1P25490 414 aa0.99□□□□□ -2.25
COPB1-212ENST00000534771 IGHMBP2P38935 993 aaKnown RBP0.99□□□□□ -2.25
COPB1-212ENST00000534771 AGTR2P50052 363 aa0.99□□□□□ -2.25
COPB1-212ENST00000534771 CPT1AP50416 773 aa0.99□□□□□ -2.25
COPB1-212ENST00000534771 COPAP53621 1224 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms