RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 STXBP5LQ9Y2K9 1186 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 HBS1LQ9Y450 684 aaKnown RBP7.77□□□□□ -1.17
HDAC3-216ENST00000523088 PCDHB3Q9Y5E6 796 aa7.77□□□□□ -1.17
HDAC3-216ENST00000523088 FRMPD2Q68DX3 1309 aaPredicted RBP7.77□□□□□ -1.17
HDAC3-216ENST00000523088 A0A1W2PQ67 120 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 SOWAHBA6NEL2 793 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 B4E1Z4 1266 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 DDX39AO00148 427 aaKnown RBP7.76□□□□□ -1.17
HDAC3-216ENST00000523088 FBP2O00757 339 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 RGS13O14921 159 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 SNPHO15079 494 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 HNRNPRO43390 633 aaKnown RBP7.76□□□□□ -1.17
HDAC3-216ENST00000523088 ICMTO60725 284 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 KRT75O95678 551 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 TIMP1P01033 207 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 IL6P05231 212 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 ANXA6P08133 673 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 PFKMP08237 780 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 GSTM1P09488 218 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 SUPT20HL2P0C7V6 817 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 EDNRBP24530 442 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 GNA11P29992 359 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 ACSL1P33121 698 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 GRIK1P39086 918 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 HNMTP50135 292 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 RPS6P62753 249 aaKnown RBP7.76□□□□□ -1.17
HDAC3-216ENST00000523088 TUBB2AQ13885 445 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 BAATQ14032 418 aaPredicted RBP7.76□□□□□ -1.17
HDAC3-216ENST00000523088 TTLL4Q14679 1199 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 NCAPHQ15003 741 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 PFKFB3Q16875 520 aaPredicted RBP7.76□□□□□ -1.17
HDAC3-216ENST00000523088 PARP6Q2NL67 630 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 CENPPQ6IPU0 288 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 MFSD5Q6N075 450 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 WDR73Q6P4I2 378 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.76□□□□□ -1.17
HDAC3-216ENST00000523088 UNC45BQ8IWX7 931 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 RASEFQ8IZ41 740 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 DEFB123Q8N688 67 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 TTC13Q8NBP0 860 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 FBXO15Q8NCQ5 510 aaPredicted RBP7.76□□□□□ -1.17
HDAC3-216ENST00000523088 NCOA7Q8NI08 942 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 FNDC8Q8TC99 324 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 NELFBQ8WX92 580 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 BADQ92934 168 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 DEPDC7Q96QD5 511 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 VPS35Q96QK1 796 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 WDR24Q96S15 920 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 TUBB2BQ9BVA1 445 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 ASPSCR1Q9BZE9 553 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 PAIP1Q9H074 479 aaKnown RBP7.76□□□□□ -1.17
HDAC3-216ENST00000523088 TMEM168Q9H0V1 697 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 LHX5Q9H2C1 402 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 ATP13A3Q9H7F0 1226 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 LIN7BQ9HAP6 207 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 MRPL40Q9NQ50 206 aaKnown RBP7.76□□□□□ -1.17
HDAC3-216ENST00000523088 SERINC1Q9NRX5 453 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 WWOXQ9NZC7 414 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 CTTNBP2NLQ9P2B4 639 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 HSFX1Q9UBD0 423 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 EGFL7Q9UHF1 273 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 FAM153AQ9UHL3 310 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 ANGPTL2Q9UKU9 493 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 SNX7Q9UNH6 387 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 DTX4Q9Y2E6 619 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 AP3M1Q9Y2T2 418 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 IFT52Q9Y366 437 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 PCDHGA2Q9Y5H1 932 aa7.76□□□□□ -1.17
HDAC3-216ENST00000523088 ZFP37Q9Y6Q3 630 aaPredicted RBP7.76□□□□□ -1.17
HDAC3-216ENST00000523088 TANC1Q9C0D5 1861 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 SOX1O00570 391 aaPredicted RBP7.75□□□□□ -1.17
HDAC3-216ENST00000523088 NFIBO00712 420 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 PFDN6O15212 129 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 KCNN4O15554 427 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 TLR5O60602 858 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 SRGAP2O75044 1071 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 DNAJB5O75953 348 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 ENDOD1O94919 500 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 SEC31AO94979 1220 aaKnown RBP7.75□□□□□ -1.17
HDAC3-216ENST00000523088 LARGE1O95461 756 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 SEC24BO95487 1268 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 CRTAMO95727 393 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 POLBP06746 335 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 GSTA1P08263 222 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 SRGAP2BP0DMP2 458 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 SELLP14151 372 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 ITGAXP20702 1163 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 SP100P23497 879 aaPredicted RBP7.75□□□□□ -1.17
HDAC3-216ENST00000523088 PTX3P26022 381 aaPredicted RBP7.75□□□□□ -1.17
HDAC3-216ENST00000523088 CALML3P27482 149 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 HLA-FP30511 346 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 PKLRP30613 574 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 SCNN1AP37088 669 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 HTR2BP41595 481 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 MAGEA11P43364 429 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 CPA2P48052 419 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 STARP49675 285 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 CDK7P50613 346 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 KCNJ10P78508 379 aa7.75□□□□□ -1.17
HDAC3-216ENST00000523088 KRT17Q04695 432 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms