RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 MAGEA3P43357 314 aa26.69■■□□□ 1.86
COL13A1-214ENST00000522165 SLC5A3P53794 718 aa26.69■■□□□ 1.86
COL13A1-214ENST00000522165 YWHAGP61981 247 aaKnown RBP eCLIP26.69■■□□□ 1.86
COL13A1-214ENST00000522165 GPNMBQ14956 572 aa26.69■■□□□ 1.86
COL13A1-214ENST00000522165 ZNF534Q76KX8 674 aa26.69■■□□□ 1.86
COL13A1-214ENST00000522165 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.69■■□□□ 1.86
COL13A1-214ENST00000522165 NKIRAS1Q9NYS0 192 aa26.69■■□□□ 1.86
COL13A1-214ENST00000522165 GGA2Q9UJY4 613 aa26.69■■□□□ 1.86
COL13A1-214ENST00000522165 PIAS1O75925 651 aa26.68■■□□□ 1.86
COL13A1-214ENST00000522165 STK10O94804 968 aaKnown RBP26.68■■□□□ 1.86
COL13A1-214ENST00000522165 FDFT1P37268 417 aa26.68■■□□□ 1.86
COL13A1-214ENST00000522165 ZNF135P52742 658 aaPredicted RBP26.68■■□□□ 1.86
COL13A1-214ENST00000522165 DENND5BQ6ZUT9 1274 aa26.68■■□□□ 1.86
COL13A1-214ENST00000522165 PDZD4Q76G19 769 aaPredicted RBP26.68■■□□□ 1.86
COL13A1-214ENST00000522165 LRRC39Q96DD0 335 aa26.68■■□□□ 1.86
COL13A1-214ENST00000522165 FERMT1Q9BQL6 677 aa26.68■■□□□ 1.86
COL13A1-214ENST00000522165 ELAC1Q9H777 363 aaKnown RBP26.68■■□□□ 1.86
COL13A1-214ENST00000522165 RAD54BQ9Y620 910 aa26.68■■□□□ 1.86
COL13A1-214ENST00000522165 RNF103O00237 685 aa26.67■■□□□ 1.86
COL13A1-214ENST00000522165 ENPP3O14638 875 aa26.67■■□□□ 1.86
COL13A1-214ENST00000522165 OPHN1O60890 802 aa26.67■■□□□ 1.86
COL13A1-214ENST00000522165 IGLV3-25P01717 112 aa26.67■■□□□ 1.86
COL13A1-214ENST00000522165 MSH2P43246 934 aa26.67■■□□□ 1.86
COL13A1-214ENST00000522165 BFSP2Q13515 415 aa26.67■■□□□ 1.86
COL13A1-214ENST00000522165 TP53INP2Q8IXH6 220 aa26.67■■□□□ 1.86
COL13A1-214ENST00000522165 FAM126BQ8IXS8 530 aa26.67■■□□□ 1.86
COL13A1-214ENST00000522165 LRRC34Q8IZ02 419 aa26.67■■□□□ 1.86
COL13A1-214ENST00000522165 CCNYQ8ND76 341 aa26.67■■□□□ 1.86
COL13A1-214ENST00000522165 DCAKDQ8WVC6 231 aa26.67■■□□□ 1.86
COL13A1-214ENST00000522165 SEZ6LQ9BYH1 1024 aa26.67■■□□□ 1.86
COL13A1-214ENST00000522165 MLXIPLQ9NP71 852 aa26.67■■□□□ 1.86
COL13A1-214ENST00000522165 FAM169AQ9Y6X4 670 aa26.67■■□□□ 1.86
COL13A1-214ENST00000522165 FAM47DPA6NHR8 397 aa26.67■■□□□ 1.86
COL13A1-214ENST00000522165 DCP1BQ8IZD4 617 aaKnown RBP26.67■■□□□ 1.86
COL13A1-214ENST00000522165 DBF4BQ8NFT6 615 aa26.67■■□□□ 1.86
COL13A1-214ENST00000522165 KIF9Q9HAQ2 790 aa26.67■■□□□ 1.86
COL13A1-214ENST00000522165 OR12D3Q9UGF7 316 aa26.67■■□□□ 1.86
COL13A1-214ENST00000522165 PRPF4O43172 522 aaKnown RBP eCLIP26.66■■□□□ 1.86
COL13A1-214ENST00000522165 EIF4EBP2Q13542 120 aaPredicted RBP26.66■■□□□ 1.86
COL13A1-214ENST00000522165 PLEKHG4Q58EX7 1191 aa26.66■■□□□ 1.86
COL13A1-214ENST00000522165 MICALCLQ6ZW33 695 aa26.66■■□□□ 1.86
COL13A1-214ENST00000522165 COLGALT1Q8NBJ5 622 aa26.66■■□□□ 1.86
COL13A1-214ENST00000522165 CKAP2Q8WWK9 683 aa26.66■■□□□ 1.86
COL13A1-214ENST00000522165 CFAP36Q96G28 342 aa26.66■■□□□ 1.86
COL13A1-214ENST00000522165 SEC16BQ96JE7 1060 aa26.66■■□□□ 1.86
COL13A1-214ENST00000522165 SMC6Q96SB8 1091 aa26.66■■□□□ 1.86
COL13A1-214ENST00000522165 EPAS1Q99814 870 aa26.66■■□□□ 1.86
COL13A1-214ENST00000522165 ABCC13Q9NSE7 274 aa26.66■■□□□ 1.86
COL13A1-214ENST00000522165 ZC3H7BQ9UGR2 993 aaKnown RBP26.66■■□□□ 1.86
COL13A1-214ENST00000522165 SNX10Q9Y5X0 201 aa26.66■■□□□ 1.86
COL13A1-214ENST00000522165 TADA2AO75478 443 aa26.66■■□□□ 1.86
COL13A1-214ENST00000522165 WASHC5Q12768 1159 aa26.66■■□□□ 1.86
COL13A1-214ENST00000522165 IFRD2Q12894 506 aaPredicted RBP26.66■■□□□ 1.86
COL13A1-214ENST00000522165 GKAP1Q5VSY0 366 aaPredicted RBP26.66■■□□□ 1.86
COL13A1-214ENST00000522165 XAB2Q9HCS7 855 aaKnown RBP26.66■■□□□ 1.86
COL13A1-214ENST00000522165 A0A1W2PPM1 405 aa26.65■■□□□ 1.86
COL13A1-214ENST00000522165 SPAG7O75391 227 aa26.65■■□□□ 1.86
COL13A1-214ENST00000522165 SLC18A1P54219 525 aa26.65■■□□□ 1.86
COL13A1-214ENST00000522165 KBTBD12Q3ZCT8 623 aa26.65■■□□□ 1.86
COL13A1-214ENST00000522165 TAX1BP1Q86VP1 789 aa26.65■■□□□ 1.86
COL13A1-214ENST00000522165 SH3TC2Q8TF17 1288 aa26.65■■□□□ 1.86
COL13A1-214ENST00000522165 RNF34Q969K3 372 aa26.65■■□□□ 1.86
COL13A1-214ENST00000522165 SGSM3Q96HU1 749 aa26.65■■□□□ 1.86
COL13A1-214ENST00000522165 SIGLEC10Q96LC7 697 aa26.65■■□□□ 1.86
COL13A1-214ENST00000522165 ABI2Q9NYB9 513 aaPredicted RBP26.65■■□□□ 1.86
COL13A1-214ENST00000522165 SMG5Q9UPR3 1016 aaKnown RBP26.65■■□□□ 1.86
COL13A1-214ENST00000522165 TTLL3Q9Y4R7 772 aa26.65■■□□□ 1.86
COL13A1-214ENST00000522165 SYN3O14994 580 aa26.64■■□□□ 1.86
COL13A1-214ENST00000522165 ZNF189O75820 626 aaPredicted RBP26.64■■□□□ 1.86
COL13A1-214ENST00000522165 VIMP08670 466 aaKnown RBP26.64■■□□□ 1.86
COL13A1-214ENST00000522165 STX2P32856 288 aa26.64■■□□□ 1.86
COL13A1-214ENST00000522165 CDK16Q00536 496 aa26.64■■□□□ 1.86
COL13A1-214ENST00000522165 BTBD8Q5XKL5 378 aa26.64■■□□□ 1.86
COL13A1-214ENST00000522165 SCN4BQ8IWT1 228 aa26.64■■□□□ 1.86
COL13A1-214ENST00000522165 ABI1Q8IZP0 508 aa26.64■■□□□ 1.86
COL13A1-214ENST00000522165 C4orf33Q8N1A6 199 aa26.64■■□□□ 1.86
COL13A1-214ENST00000522165 NPWQ8N729 165 aa26.64■■□□□ 1.86
COL13A1-214ENST00000522165 GDAP1Q8TB36 358 aa26.64■■□□□ 1.86
COL13A1-214ENST00000522165 MZB1Q8WU39 189 aa26.64■■□□□ 1.86
COL13A1-214ENST00000522165 PLAC1Q9HBJ0 212 aa26.64■■□□□ 1.86
COL13A1-214ENST00000522165 SEPT10Q9P0V9 454 aa26.64■■□□□ 1.86
COL13A1-214ENST00000522165 PCDHB7Q9Y5E2 793 aa26.64■■□□□ 1.86
COL13A1-214ENST00000522165 DNM1LO00429 736 aa26.64■■□□□ 1.85
COL13A1-214ENST00000522165 NCAM2O15394 837 aa26.64■■□□□ 1.85
COL13A1-214ENST00000522165 IRAK2O43187 625 aa26.64■■□□□ 1.85
COL13A1-214ENST00000522165 LRIG2O94898 1065 aa26.64■■□□□ 1.85
COL13A1-214ENST00000522165 C1QAP02745 245 aa26.64■■□□□ 1.85
COL13A1-214ENST00000522165 PGFP49763 221 aa26.64■■□□□ 1.85
COL13A1-214ENST00000522165 VARS2Q5ST30 1063 aaKnown RBP26.64■■□□□ 1.85
COL13A1-214ENST00000522165 SCD5Q86SK9 330 aa26.64■■□□□ 1.85
COL13A1-214ENST00000522165 CACNA2D3Q8IZS8 1091 aa26.64■■□□□ 1.85
COL13A1-214ENST00000522165 ZNF567Q8N184 647 aa26.64■■□□□ 1.85
COL13A1-214ENST00000522165 DENND1AQ8TEH3 1009 aa26.64■■□□□ 1.85
COL13A1-214ENST00000522165 SLC44A1Q8WWI5 657 aa26.64■■□□□ 1.85
COL13A1-214ENST00000522165 FUBP3Q96I24 572 aaKnown RBP eCLIP26.64■■□□□ 1.85
COL13A1-214ENST00000522165 ATXN2Q99700 1313 aaKnown RBP26.64■■□□□ 1.85
COL13A1-214ENST00000522165 OSBPL2Q9H1P3 480 aa26.64■■□□□ 1.85
COL13A1-214ENST00000522165 EIF2B3Q9NR50 452 aaKnown RBP26.64■■□□□ 1.85
COL13A1-214ENST00000522165 ARHGEF38Q9NXL2 777 aa26.64■■□□□ 1.85
COL13A1-214ENST00000522165 GRIA1P42261 906 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms