RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 CYTH2Q99418 400 aa18.9■□□□□ 0.62
SDC2-202ENST00000518385 TMEM106CQ9BVX2 250 aa18.9■□□□□ 0.62
SDC2-202ENST00000518385 TSSK1BQ9BXA7 367 aa18.9■□□□□ 0.62
SDC2-202ENST00000518385 DUSP16Q9BY84 665 aa18.9■□□□□ 0.62
SDC2-202ENST00000518385 HIPK3Q9H422 1215 aa18.9■□□□□ 0.62
SDC2-202ENST00000518385 DPEP3Q9H4B8 488 aa18.9■□□□□ 0.62
SDC2-202ENST00000518385 SLCO1B3Q9NPD5 702 aa18.9■□□□□ 0.62
SDC2-202ENST00000518385 KLHL11Q9NVR0 708 aa18.9■□□□□ 0.62
SDC2-202ENST00000518385 MAGEA13PA6NCF6 341 aa18.89■□□□□ 0.62
SDC2-202ENST00000518385 ARL5CA6NH57 179 aa18.89■□□□□ 0.62
SDC2-202ENST00000518385 GYG2O15488 501 aa18.89■□□□□ 0.62
SDC2-202ENST00000518385 GSC2O15499 205 aa18.89■□□□□ 0.62
SDC2-202ENST00000518385 PARNO95453 639 aaKnown RBP18.89■□□□□ 0.62
SDC2-202ENST00000518385 SLC18A2Q05940 514 aa18.89■□□□□ 0.62
SDC2-202ENST00000518385 AP1B1Q10567 949 aa18.89■□□□□ 0.62
SDC2-202ENST00000518385 CCDC14Q49A88 953 aa18.89■□□□□ 0.62
SDC2-202ENST00000518385 ZNF449Q6P9G9 518 aa18.89■□□□□ 0.62
SDC2-202ENST00000518385 SLC24A5Q71RS6 500 aa18.89■□□□□ 0.62
SDC2-202ENST00000518385 KIRREL3Q8IZU9 778 aa18.89■□□□□ 0.62
SDC2-202ENST00000518385 KCNV2Q8TDN2 545 aa18.89■□□□□ 0.62
SDC2-202ENST00000518385 MZB1Q8WU39 189 aa18.89■□□□□ 0.62
SDC2-202ENST00000518385 KCTD13Q8WZ19 329 aa18.89■□□□□ 0.62
SDC2-202ENST00000518385 KHSRPQ92945 711 aaKnown RBP eCLIP18.89■□□□□ 0.627e-7■□□□□ 11.1
SDC2-202ENST00000518385 MCUR1Q96AQ8 359 aa18.89■□□□□ 0.62
SDC2-202ENST00000518385 SKA1Q96BD8 255 aa18.89■□□□□ 0.62
SDC2-202ENST00000518385 PAWRQ96IZ0 340 aaKnown RBP18.89■□□□□ 0.62
SDC2-202ENST00000518385 SENP8Q96LD8 212 aa18.89■□□□□ 0.62
SDC2-202ENST00000518385 PWWP2AQ96N64 755 aa18.89■□□□□ 0.62
SDC2-202ENST00000518385 SIKE1Q9BRV8 207 aa18.89■□□□□ 0.62
SDC2-202ENST00000518385 KIF9Q9HAQ2 790 aa18.89■□□□□ 0.62
SDC2-202ENST00000518385 GOLGA2P5Q9HBQ8 144 aa18.89■□□□□ 0.62
SDC2-202ENST00000518385 SLC24A3Q9HC58 644 aa18.89■□□□□ 0.62
SDC2-202ENST00000518385 MIOSQ9NXC5 875 aa18.89■□□□□ 0.62
SDC2-202ENST00000518385 CLUHO75153 1309 aa18.89■□□□□ 0.61
SDC2-202ENST00000518385 ARHGEF37A1IGU5 675 aa18.89■□□□□ 0.61
SDC2-202ENST00000518385 APOC4-APOC2K7ER74 178 aa18.89■□□□□ 0.61
SDC2-202ENST00000518385 MDM4O15151 490 aa18.89■□□□□ 0.61
SDC2-202ENST00000518385 EOMESO95936 686 aa18.89■□□□□ 0.61
SDC2-202ENST00000518385 APOC2P02655 101 aa18.89■□□□□ 0.61
SDC2-202ENST00000518385 PTPN1P18031 435 aaKnown RBP18.89■□□□□ 0.61
SDC2-202ENST00000518385 MLH1P40692 756 aa18.89■□□□□ 0.61
SDC2-202ENST00000518385 PLCB3Q01970 1234 aa18.89■□□□□ 0.61
SDC2-202ENST00000518385 MTDHQ86UE4 582 aaKnown RBP18.89■□□□□ 0.61
SDC2-202ENST00000518385 SCUBE3Q8IX30 993 aa18.89■□□□□ 0.61
SDC2-202ENST00000518385 PDIK1LQ8N165 341 aa18.89■□□□□ 0.61
SDC2-202ENST00000518385 C4orf33Q8N1A6 199 aa18.89■□□□□ 0.61
SDC2-202ENST00000518385 SLC2A14Q8TDB8 520 aa18.89■□□□□ 0.61
SDC2-202ENST00000518385 LINC01599Q8WXQ3 324 aa18.89■□□□□ 0.61
SDC2-202ENST00000518385 CENPIQ92674 756 aaPredicted RBP18.89■□□□□ 0.61
SDC2-202ENST00000518385 APOPT1Q96IL0 206 aa18.89■□□□□ 0.61
SDC2-202ENST00000518385 UROC1Q96N76 676 aa18.89■□□□□ 0.61
SDC2-202ENST00000518385 MAK16Q9BXY0 300 aaKnown RBP18.89■□□□□ 0.61
SDC2-202ENST00000518385 CADM1Q9BY67 442 aaKnown RBP18.89■□□□□ 0.61
SDC2-202ENST00000518385 PRDM16Q9HAZ2 1276 aa18.89■□□□□ 0.61
SDC2-202ENST00000518385 PNPLA8Q9NP80 782 aa18.89■□□□□ 0.61
SDC2-202ENST00000518385 MKS1Q9NXB0 559 aa18.89■□□□□ 0.61
SDC2-202ENST00000518385 PCSK1NQ9UHG2 260 aa18.89■□□□□ 0.61
SDC2-202ENST00000518385 GRID1Q9ULK0 1009 aa18.89■□□□□ 0.61
SDC2-202ENST00000518385 SORCS3Q9UPU3 1222 aa18.89■□□□□ 0.61
SDC2-202ENST00000518385 CST8O60676 142 aa18.88■□□□□ 0.61
SDC2-202ENST00000518385 SNUPNO95149 360 aaKnown RBP18.88■□□□□ 0.61
SDC2-202ENST00000518385 CCDC130P13994 396 aa18.88■□□□□ 0.61
SDC2-202ENST00000518385 GM2AP17900 193 aa18.88■□□□□ 0.61
SDC2-202ENST00000518385 ADORA2BP29275 332 aa18.88■□□□□ 0.61
SDC2-202ENST00000518385 LGSNQ5TDP6 509 aa18.88■□□□□ 0.61
SDC2-202ENST00000518385 OSTM1Q86WC4 334 aa18.88■□□□□ 0.61
SDC2-202ENST00000518385 VPS52Q8N1B4 723 aa18.88■□□□□ 0.61
SDC2-202ENST00000518385 GALNT15Q8N3T1 639 aa18.88■□□□□ 0.61
SDC2-202ENST00000518385 ZNF276Q8N554 614 aa18.88■□□□□ 0.61
SDC2-202ENST00000518385 NAT8LQ8N9F0 302 aa18.88■□□□□ 0.61
SDC2-202ENST00000518385 DBF4BQ8NFT6 615 aa18.88■□□□□ 0.61
SDC2-202ENST00000518385 SEPT8Q92599 483 aa18.88■□□□□ 0.61
SDC2-202ENST00000518385 PAFAH2Q99487 392 aa18.88■□□□□ 0.61
SDC2-202ENST00000518385 NPHS2Q9NP85 383 aa18.88■□□□□ 0.61
SDC2-202ENST00000518385 KCNK4Q9NYG8 393 aa18.88■□□□□ 0.61
SDC2-202ENST00000518385 IL1RAPL1Q9NZN1 696 aa18.88■□□□□ 0.61
SDC2-202ENST00000518385 CPSF2Q9P2I0 782 aaKnown RBP18.88■□□□□ 0.61
SDC2-202ENST00000518385 TBX21Q9UL17 535 aa18.88■□□□□ 0.61
SDC2-202ENST00000518385 ATP11BQ9Y2G3 1177 aa18.88■□□□□ 0.61
SDC2-202ENST00000518385 DPPA5A6NC42 116 aa18.87■□□□□ 0.61
SDC2-202ENST00000518385 ANKRD33BA6NCL7 494 aa18.87■□□□□ 0.61
SDC2-202ENST00000518385 ENPP3O14638 875 aa18.87■□□□□ 0.61
SDC2-202ENST00000518385 INPPL1O15357 1258 aa18.87■□□□□ 0.61
SDC2-202ENST00000518385 MAP3K7O43318 606 aa18.87■□□□□ 0.61
SDC2-202ENST00000518385 PSMG1O95456 288 aa18.87■□□□□ 0.61
SDC2-202ENST00000518385 CBX6O95503 412 aa18.87■□□□□ 0.61
SDC2-202ENST00000518385 CXCL10P02778 98 aa18.87■□□□□ 0.61
SDC2-202ENST00000518385 MT-ND3P03897 115 aa18.87■□□□□ 0.61
SDC2-202ENST00000518385 PAPOLAP51003 745 aaKnown RBP18.87■□□□□ 0.61
SDC2-202ENST00000518385 AFF1P51825 1210 aaKnown RBP18.87■□□□□ 0.61
SDC2-202ENST00000518385 GPX6P59796 221 aa18.87■□□□□ 0.61
SDC2-202ENST00000518385 ZBTB16Q05516 673 aa18.87■□□□□ 0.61
SDC2-202ENST00000518385 SMTNL2Q2TAL5 461 aa18.87■□□□□ 0.61
SDC2-202ENST00000518385 DNAL1Q4LDG9 190 aa18.87■□□□□ 0.61
SDC2-202ENST00000518385 KCNT1Q5JUK3 1230 aa18.87■□□□□ 0.61
SDC2-202ENST00000518385 SNX30Q5VWJ9 437 aa18.87■□□□□ 0.61
SDC2-202ENST00000518385 WSCD1Q658N2 575 aa18.87■□□□□ 0.61
SDC2-202ENST00000518385 TRIM68Q6AZZ1 485 aa18.87■□□□□ 0.61
SDC2-202ENST00000518385 TRNP1Q6NT89 227 aa18.87■□□□□ 0.61
SDC2-202ENST00000518385 NECAB2Q7Z6G3 386 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms