RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 CHRM2P08172 466 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 RPSAP08865 295 aaKnown RBP5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 PNMA6AP0CW24 399 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 TROVE2P10155 538 aaKnown RBP eCLIP5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 KITP10721 976 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 H2AFXP16104 143 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 CHRM3P20309 590 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 ADRA1BP35368 520 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 DDIT3P35638 169 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 LMAN1P49257 510 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 SLC11A2P49281 568 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 CACNA2D1P54289 1103 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 CSE1LP55060 971 aaKnown RBP5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 UCP3P55916 312 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 TUBA1BP68363 451 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 WASHC5Q12768 1159 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 BIRC3Q13489 604 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 CUL3Q13618 768 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 WTAPQ15007 396 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 PLCB4Q15147 1175 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 INAQ16352 499 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 USH1GQ495M9 461 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 SH2D4BQ5SQS7 431 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 LRRC31Q6UY01 552 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 PACS1Q6VY07 963 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 TUBA1AQ71U36 451 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 ZNF804AQ7Z570 1209 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 TMEM110Q86TL2 294 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 DTX2Q86UW9 622 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 RPAP2Q8IXW5 612 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 CHCHD4Q8N4Q1 142 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 SLC15A4Q8N697 577 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 DNAJC5GQ8N7S2 189 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 NGDNQ8NEJ9 315 aaKnown RBP5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 OR8K1Q8NGG5 319 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 IL31RAQ8NI17 732 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 MYCBPAPQ8TBZ2 947 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 LPIN2Q92539 896 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 ANKS1AQ92625 1134 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 GOLGA1Q92805 767 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 SMARCE1Q969G3 411 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 PPP2R3CQ969Q6 453 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 LRIG1Q96JA1 1093 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 JPH2Q9BR39 696 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 NUP62CLQ9H1M0 184 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 DHX36Q9H2U1 1008 aaKnown RBP5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 ZMAT3Q9HA38 289 aaKnown RBP5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 KIF9Q9HAQ2 790 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 ZNF287Q9HBT7 754 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 OBP2AQ9NY56 170 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 UBAP1Q9NZ09 502 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 MAFFQ9ULX9 164 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 DAAM1Q9Y4D1 1078 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 KIF1BO60333 1816 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 CLTCQ00610 1675 aaKnown RBP5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 PREX1Q8TCU6 1659 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 NEXMIFQ5QGS0 1516 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 ALKQ9UM73 1620 aa5.01□□□□□ -1.61
HMGB3P13-201ENST00000511263 PPIP5K1Q6PFW1 1433 aa5□□□□□ -1.61
HMGB3P13-201ENST00000511263 A0A087WWL8 130 aa5□□□□□ -1.61
HMGB3P13-201ENST00000511263 ERICH2A1L162 156 aa5□□□□□ -1.61
HMGB3P13-201ENST00000511263 TARSL2A2RTX5 802 aaKnown RBP5□□□□□ -1.61
HMGB3P13-201ENST00000511263 MBD3L4A6NDZ8 208 aaPredicted RBP5□□□□□ -1.61
HMGB3P13-201ENST00000511263 MBD3L3A6NE82 208 aaPredicted RBP5□□□□□ -1.61
HMGB3P13-201ENST00000511263 A6NNZ2 444 aa5□□□□□ -1.61
HMGB3P13-201ENST00000511263 FYB1O15117 783 aa5□□□□□ -1.61
HMGB3P13-201ENST00000511263 TTI1O43156 1089 aa5□□□□□ -1.61
HMGB3P13-201ENST00000511263 PLIN1O60240 522 aa5□□□□□ -1.61
HMGB3P13-201ENST00000511263 NEMFO60524 1076 aa5□□□□□ -1.61
HMGB3P13-201ENST00000511263 BBOX1O75936 387 aa5□□□□□ -1.61
HMGB3P13-201ENST00000511263 LUC7L3O95232 432 aaKnown RBP5□□□□□ -1.61
HMGB3P13-201ENST00000511263 DLDP09622 509 aaKnown RBP5□□□□□ -1.61
HMGB3P13-201ENST00000511263 NPR1P16066 1061 aa5□□□□□ -1.61
HMGB3P13-201ENST00000511263 NDUFB7P17568 137 aa5□□□□□ -1.61
HMGB3P13-201ENST00000511263 PROZP22891 400 aa5□□□□□ -1.61
HMGB3P13-201ENST00000511263 CCT6AP40227 531 aaKnown RBP5□□□□□ -1.61
HMGB3P13-201ENST00000511263 CLK1P49759 484 aaKnown RBP5□□□□□ -1.61
HMGB3P13-201ENST00000511263 CCT8P50990 548 aa5□□□□□ -1.61
HMGB3P13-201ENST00000511263 ARFIP2P53365 341 aa5□□□□□ -1.61
HMGB3P13-201ENST00000511263 HDAC4P56524 1084 aa5□□□□□ -1.61
HMGB3P13-201ENST00000511263 ZBED6P86452 979 aa5□□□□□ -1.61
HMGB3P13-201ENST00000511263 IFFO1Q0D2I5 559 aa5□□□□□ -1.61
HMGB3P13-201ENST00000511263 IKQ13123 557 aaPredicted RBP5□□□□□ -1.61
HMGB3P13-201ENST00000511263 DHX8Q14562 1220 aaKnown RBP5□□□□□ -1.61
HMGB3P13-201ENST00000511263 TUBB8Q3ZCM7 444 aa5□□□□□ -1.61
HMGB3P13-201ENST00000511263 CCDC184Q52MB2 194 aa5□□□□□ -1.61
HMGB3P13-201ENST00000511263 COBLL1Q53SF7 1204 aa5□□□□□ -1.61
HMGB3P13-201ENST00000511263 SYCP2LQ5T4T6 812 aa5□□□□□ -1.61
HMGB3P13-201ENST00000511263 DPY19L2P1Q6NXN4 242 aa5□□□□□ -1.61
HMGB3P13-201ENST00000511263 FBXO38Q6PIJ6 1188 aa5□□□□□ -1.61
HMGB3P13-201ENST00000511263 ZNF551Q7Z340 670 aaPredicted RBP5□□□□□ -1.61
HMGB3P13-201ENST00000511263 WDR53Q7Z5U6 358 aaPredicted RBP5□□□□□ -1.61
HMGB3P13-201ENST00000511263 DGKHQ86XP1 1220 aa5□□□□□ -1.61
HMGB3P13-201ENST00000511263 SLC15A3Q8IY34 581 aa5□□□□□ -1.61
HMGB3P13-201ENST00000511263 SAMD14Q8IZD0 417 aaPredicted RBP5□□□□□ -1.61
HMGB3P13-201ENST00000511263 ARL10Q8N8L6 244 aa5□□□□□ -1.61
HMGB3P13-201ENST00000511263 ACMSDQ8TDX5 336 aa5□□□□□ -1.61
HMGB3P13-201ENST00000511263 CTNNBL1Q8WYA6 563 aaPredicted RBP5□□□□□ -1.61
HMGB3P13-201ENST00000511263 CUL5Q93034 780 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms