RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 TRIM2Q9C040 744 aa4.46□□□□□ -1.7
CLK1-213ENST00000492793 PCED1AQ9H1Q7 454 aa4.46□□□□□ -1.7
CLK1-213ENST00000492793 CDCP1Q9H5V8 836 aa4.46□□□□□ -1.7
CLK1-213ENST00000492793 RIOX1Q9H6W3 641 aa4.46□□□□□ -1.7
CLK1-213ENST00000492793 ASNSD1Q9NWL6 643 aa4.46□□□□□ -1.7
CLK1-213ENST00000492793 SAGE1Q9NXZ1 904 aa4.46□□□□□ -1.7
CLK1-213ENST00000492793 C9orf78Q9NZ63 289 aaPredicted RBP4.46□□□□□ -1.7
CLK1-213ENST00000492793 ADAM21Q9UKJ8 722 aa4.46□□□□□ -1.7
CLK1-213ENST00000492793 FZD4Q9ULV1 537 aa4.46□□□□□ -1.7
CLK1-213ENST00000492793 ARHGEF17Q96PE2 2063 aaPredicted RBP4.45□□□□□ -1.7
CLK1-213ENST00000492793 GXYLT2A0PJZ3 443 aa4.45□□□□□ -1.7
CLK1-213ENST00000492793 SEPT4O43236 478 aa4.45□□□□□ -1.7
CLK1-213ENST00000492793 NUDT3O95989 172 aa4.45□□□□□ -1.7
CLK1-213ENST00000492793 MBPP02686 304 aaPredicted RBP4.45□□□□□ -1.7
CLK1-213ENST00000492793 POLBP06746 335 aa4.45□□□□□ -1.7
CLK1-213ENST00000492793 CYP2D6P10635 497 aa4.45□□□□□ -1.7
CLK1-213ENST00000492793 CPA1P15085 419 aa4.45□□□□□ -1.7
CLK1-213ENST00000492793 PROZP22891 400 aa4.45□□□□□ -1.7
CLK1-213ENST00000492793 RCAN1P53805 252 aa4.45□□□□□ -1.7
CLK1-213ENST00000492793 KPNB1Q14974 876 aaKnown RBP4.45□□□□□ -1.7
CLK1-213ENST00000492793 ALFQ53S48 1182 aa4.45□□□□□ -1.7
CLK1-213ENST00000492793 TMEM63BQ5T3F8 832 aa4.45□□□□□ -1.7
CLK1-213ENST00000492793 PRAMEF17Q5VTA0 474 aa4.45□□□□□ -1.7
CLK1-213ENST00000492793 CYP26C1Q6V0L0 522 aa4.45□□□□□ -1.7
CLK1-213ENST00000492793 KYAT3Q6YP21 454 aaKnown RBP4.45□□□□□ -1.7
CLK1-213ENST00000492793 CHFRQ96EP1 664 aa4.45□□□□□ -1.7
CLK1-213ENST00000492793 RBM17Q96I25 401 aaKnown RBP4.45□□□□□ -1.7
CLK1-213ENST00000492793 BBC3Q96PG8 261 aaPredicted RBP4.45□□□□□ -1.7
CLK1-213ENST00000492793 PIGSQ96S52 555 aa4.45□□□□□ -1.7
CLK1-213ENST00000492793 TIMP4Q99727 224 aa4.45□□□□□ -1.7
CLK1-213ENST00000492793 NUAK2Q9H093 628 aa4.45□□□□□ -1.7
CLK1-213ENST00000492793 IKZF4Q9H2S9 585 aa4.45□□□□□ -1.7
CLK1-213ENST00000492793 RMI1Q9H9A7 625 aa4.45□□□□□ -1.7
CLK1-213ENST00000492793 NOD2Q9HC29 1040 aa4.45□□□□□ -1.7
CLK1-213ENST00000492793 PDE11AQ9HCR9 933 aa4.45□□□□□ -1.7
CLK1-213ENST00000492793 KCNK9Q9NPC2 374 aa4.45□□□□□ -1.7
CLK1-213ENST00000492793 RXFP3Q9NSD7 469 aa4.45□□□□□ -1.7
CLK1-213ENST00000492793 ASIC5Q9NY37 505 aa4.45□□□□□ -1.7
CLK1-213ENST00000492793 DERAQ9Y315 318 aa4.45□□□□□ -1.7
CLK1-213ENST00000492793 WDR33Q9C0J8 1336 aaKnown RBP4.45□□□□□ -1.7
CLK1-213ENST00000492793 COL11A2P13942 1736 aaPredicted RBP4.44□□□□□ -1.7
CLK1-213ENST00000492793 C3orf70A6NLC5 250 aaPredicted RBP4.44□□□□□ -1.7
CLK1-213ENST00000492793 TMEM232C9JQI7 657 aa4.44□□□□□ -1.7
CLK1-213ENST00000492793 POC1B-GALNT4F8VUJ3 575 aa4.44□□□□□ -1.7
CLK1-213ENST00000492793 STX16-NPEPL1H3BU86 382 aa4.44□□□□□ -1.7
CLK1-213ENST00000492793 H7C1Q1 480 aa4.44□□□□□ -1.7
CLK1-213ENST00000492793 STX16O14662 325 aa4.44□□□□□ -1.7
CLK1-213ENST00000492793 RNF8O76064 485 aa4.44□□□□□ -1.7
CLK1-213ENST00000492793 AGR2O95994 175 aa4.44□□□□□ -1.7
CLK1-213ENST00000492793 TK1P04183 234 aa4.44□□□□□ -1.7
CLK1-213ENST00000492793 NDUFS1P28331 727 aa4.44□□□□□ -1.7
CLK1-213ENST00000492793 SLC14A1Q13336 389 aa4.44□□□□□ -1.7
CLK1-213ENST00000492793 GAB1Q13480 694 aa4.44□□□□□ -1.7
CLK1-213ENST00000492793 LARS2Q15031 903 aaKnown RBP4.44□□□□□ -1.7
CLK1-213ENST00000492793 LCE5AQ5TCM9 118 aa4.44□□□□□ -1.7
CLK1-213ENST00000492793 RANBP10Q6VN20 620 aa4.44□□□□□ -1.7
CLK1-213ENST00000492793 GALNT4Q8N4A0 578 aa4.44□□□□□ -1.7
CLK1-213ENST00000492793 ANKRD44Q8N8A2 993 aa4.44□□□□□ -1.7
CLK1-213ENST00000492793 BOLLQ8N9W6 283 aaKnown RBP4.44□□□□□ -1.7
CLK1-213ENST00000492793 CLEC4CQ8WTT0 213 aa4.44□□□□□ -1.7
CLK1-213ENST00000492793 KCNJ9Q92806 393 aa4.44□□□□□ -1.7
CLK1-213ENST00000492793 ARRDC3Q96B67 414 aa4.44□□□□□ -1.7
CLK1-213ENST00000492793 SARAFQ96BY9 339 aa4.44□□□□□ -1.7
CLK1-213ENST00000492793 SDCCAG3Q96C92 435 aa4.44□□□□□ -1.7
CLK1-213ENST00000492793 REPS1Q96D71 796 aa4.44□□□□□ -1.7
CLK1-213ENST00000492793 TRMT61AQ96FX7 289 aaKnown RBP4.44□□□□□ -1.7
CLK1-213ENST00000492793 ZNF764Q96H86 408 aaPredicted RBP4.44□□□□□ -1.7
CLK1-213ENST00000492793 HIC2Q96JB3 615 aa4.44□□□□□ -1.7
CLK1-213ENST00000492793 GPR78Q96P69 363 aa4.44□□□□□ -1.7
CLK1-213ENST00000492793 EIF2AK1Q9BQI3 630 aaKnown RBP4.44□□□□□ -1.7
CLK1-213ENST00000492793 ABHD14AQ9BUJ0 271 aa4.44□□□□□ -1.7
CLK1-213ENST00000492793 CLPBQ9H078 707 aa4.44□□□□□ -1.7
CLK1-213ENST00000492793 PLEKHA2Q9HB19 425 aa4.44□□□□□ -1.7
CLK1-213ENST00000492793 ALG13Q9NP73 1137 aaKnown RBP4.44□□□□□ -1.7
CLK1-213ENST00000492793 G6PC2Q9NQR9 355 aa4.44□□□□□ -1.7
CLK1-213ENST00000492793 TMLHEQ9NVH6 421 aa4.44□□□□□ -1.7
CLK1-213ENST00000492793 SLC25A13Q9UJS0 675 aa4.44□□□□□ -1.7
CLK1-213ENST00000492793 LRRFIP2Q9Y608 721 aaKnown RBP4.44□□□□□ -1.7
CLK1-213ENST00000492793 SPATA31A6Q5VVP1 1343 aa4.44□□□□□ -1.7
CLK1-213ENST00000492793 MBD3L5A6NJ08 208 aaPredicted RBP4.43□□□□□ -1.7
CLK1-213ENST00000492793 BTBD19C9JJ37 291 aa4.43□□□□□ -1.7
CLK1-213ENST00000492793 NCAM2O15394 837 aa4.43□□□□□ -1.7
CLK1-213ENST00000492793 HEXIM1O94992 359 aaKnown RBP4.43□□□□□ -1.7
CLK1-213ENST00000492793 TFRCP02786 760 aaKnown RBP4.43□□□□□ -1.7
CLK1-213ENST00000492793 CKMT1AP12532 417 aa4.43□□□□□ -1.7
CLK1-213ENST00000492793 WT1P19544 449 aaPredicted RBP4.43□□□□□ -1.7
CLK1-213ENST00000492793 BMP5P22003 454 aa4.43□□□□□ -1.7
CLK1-213ENST00000492793 STAT6P42226 847 aa4.43□□□□□ -1.7
CLK1-213ENST00000492793 SLC37A1P57057 533 aa4.43□□□□□ -1.7
CLK1-213ENST00000492793 TLE3Q04726 772 aa4.43□□□□□ -1.7
CLK1-213ENST00000492793 ANKRD1Q15327 319 aa4.43□□□□□ -1.7
CLK1-213ENST00000492793 DLGAP5Q15398 846 aa4.43□□□□□ -1.7
CLK1-213ENST00000492793 SMAD1Q15797 465 aaKnown RBP4.43□□□□□ -1.7
CLK1-213ENST00000492793 FAM110CQ1W6H9 321 aa4.43□□□□□ -1.7
CLK1-213ENST00000492793 ZNF362Q5T0B9 420 aaPredicted RBP4.43□□□□□ -1.7
CLK1-213ENST00000492793 CCDC70Q6NSX1 233 aa4.43□□□□□ -1.7
CLK1-213ENST00000492793 DHRS13Q6UX07 377 aa4.43□□□□□ -1.7
CLK1-213ENST00000492793 KIAA1324Q6UXG2 1013 aaKnown RBP4.43□□□□□ -1.7
CLK1-213ENST00000492793 MMS22LQ6ZRQ5 1243 aa4.43□□□□□ -1.7
CLK1-213ENST00000492793 CHSY1Q86X52 802 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms